RNA–Protein interactions for RNA: ENST00000468476.1

PABPC4-209, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 3,592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-209ENST00000468476 TSPY10P0CW01 314 aa12.46□□□□□ -0.42
PABPC4-209ENST00000468476 PTPRKQ15262 1439 aa12.45□□□□□ -0.42
PABPC4-209ENST00000468476 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
PABPC4-209ENST00000468476 EPRSP07814 1512 aaKnown RBP12.45□□□□□ -0.42
PABPC4-209ENST00000468476 MPHOSPH9Q99550 1183 aa12.44□□□□□ -0.42
PABPC4-209ENST00000468476 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
PABPC4-209ENST00000468476 KIAA0586Q9BVV6 1533 aa12.43□□□□□ -0.42
PABPC4-209ENST00000468476 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
PABPC4-209ENST00000468476 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
PABPC4-209ENST00000468476 TIMELESSQ9UNS1 1208 aa12.42□□□□□ -0.42
PABPC4-209ENST00000468476 PPP1R15AO75807 674 aaPredicted RBP12.42□□□□□ -0.42
PABPC4-209ENST00000468476 WDR97A6NE52 1622 aa12.41□□□□□ -0.42
PABPC4-209ENST00000468476 PTPRGP23470 1445 aa12.41□□□□□ -0.42
PABPC4-209ENST00000468476 THOC2Q8NI27 1593 aaKnown RBP12.41□□□□□ -0.42
PABPC4-209ENST00000468476 WDR62O43379 1518 aa12.4□□□□□ -0.42
PABPC4-209ENST00000468476 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
PABPC4-209ENST00000468476 MAP3K1Q13233 1512 aa12.39□□□□□ -0.43
PABPC4-209ENST00000468476 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
PABPC4-209ENST00000468476 RGL3Q3MIN7 710 aa12.39□□□□□ -0.43
PABPC4-209ENST00000468476 ANP32CO43423 234 aa12.39□□□□□ -0.43
PABPC4-209ENST00000468476 MAGI3Q5TCQ9 1506 aa12.38□□□□□ -0.43
PABPC4-209ENST00000468476 L3MBTL2Q969R5 705 aa12.37□□□□□ -0.43
PABPC4-209ENST00000468476 SENP3Q9H4L4 574 aaPredicted RBP12.37□□□□□ -0.43
PABPC4-209ENST00000468476 A0A0U1RQG5 324 aaPredicted RBP12.36□□□□□ -0.43
PABPC4-209ENST00000468476 PKD2Q13563 968 aa12.36□□□□□ -0.43
PABPC4-209ENST00000468476 CFAP43Q8NDM7 1665 aa12.36□□□□□ -0.43
PABPC4-209ENST00000468476 HECW1Q76N89 1606 aa12.36□□□□□ -0.43
PABPC4-209ENST00000468476 EHBP1L1Q8N3D4 1523 aa12.36□□□□□ -0.43
PABPC4-209ENST00000468476 NAIPQ13075 1403 aa12.36□□□□□ -0.43
PABPC4-209ENST00000468476 SUPT6HQ7KZ85 1726 aaKnown RBP12.36□□□□□ -0.43
PABPC4-209ENST00000468476 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
PABPC4-209ENST00000468476 SAMD9Q5K651 1589 aa12.35□□□□□ -0.43
PABPC4-209ENST00000468476 DISP1Q96F81 1524 aa12.34□□□□□ -0.43
PABPC4-209ENST00000468476 GLIPR1L2Q4G1C9 344 aa12.34□□□□□ -0.43
PABPC4-209ENST00000468476 MAPKBP1O60336 1514 aa12.34□□□□□ -0.43
PABPC4-209ENST00000468476 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
PABPC4-209ENST00000468476 NUP153P49790 1475 aaKnown RBP12.33□□□□□ -0.44
PABPC4-209ENST00000468476 FANCIQ9NVI1 1328 aa12.33□□□□□ -0.44
PABPC4-209ENST00000468476 PTPN23Q9H3S7 1636 aa12.33□□□□□ -0.44
PABPC4-209ENST00000468476 HSPA5P11021 654 aaKnown RBP12.32□□□□□ -0.44
PABPC4-209ENST00000468476 HFM1A2PYH4 1435 aa12.31□□□□□ -0.44
PABPC4-209ENST00000468476 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
PABPC4-209ENST00000468476 UACAQ9BZF9 1416 aa12.31□□□□□ -0.44
PABPC4-209ENST00000468476 NUP155O75694 1391 aa12.31□□□□□ -0.44
PABPC4-209ENST00000468476 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
PABPC4-209ENST00000468476 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
PABPC4-209ENST00000468476 TROQ12816 1431 aaPredicted RBP12.29□□□□□ -0.44
PABPC4-209ENST00000468476 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
PABPC4-209ENST00000468476 UGGT2Q9NYU1 1516 aa12.28□□□□□ -0.44
PABPC4-209ENST00000468476 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
PABPC4-209ENST00000468476 ZMYND15Q9H091 742 aa12.27□□□□□ -0.44
PABPC4-209ENST00000468476 NOP58Q9Y2X3 529 aaKnown RBP12.27□□□□□ -0.44
PABPC4-209ENST00000468476 DCAF11Q8TEB1 546 aa12.27□□□□□ -0.45
PABPC4-209ENST00000468476 DAPK1P53355 1430 aa12.27□□□□□ -0.45
PABPC4-209ENST00000468476 LRRIQ1Q96JM4 1722 aa12.27□□□□□ -0.45
PABPC4-209ENST00000468476 IRX6P78412 446 aaPredicted RBP12.27□□□□□ -0.45
PABPC4-209ENST00000468476 ABCC5O15440 1437 aa12.26□□□□□ -0.45
PABPC4-209ENST00000468476 FAM9BQ8IZU0 186 aa12.26□□□□□ -0.45
PABPC4-209ENST00000468476 ANKRD30AQ9BXX3 1397 aa12.26□□□□□ -0.45
PABPC4-209ENST00000468476 RAPGEF6Q8TEU7 1601 aa12.25□□□□□ -0.45
PABPC4-209ENST00000468476 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
PABPC4-209ENST00000468476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.24□□□□□ -0.45
PABPC4-209ENST00000468476 NBPF8Q3BBV2 869 aa12.23□□□□□ -0.45
PABPC4-209ENST00000468476 MIA2Q96PC5 1412 aa12.23□□□□□ -0.45
PABPC4-209ENST00000468476 ATP10BO94823 1461 aa12.23□□□□□ -0.45
PABPC4-209ENST00000468476 HNRNPUQ00839 825 aaKnown RBP eCLIP12.22□□□□□ -0.45
PABPC4-209ENST00000468476 AFAP1Q8N556 730 aa12.22□□□□□ -0.45
PABPC4-209ENST00000468476 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
PABPC4-209ENST00000468476 CAMSAP2Q08AD1 1489 aa12.21□□□□□ -0.45
PABPC4-209ENST00000468476 CARD11Q9BXL7 1154 aa12.21□□□□□ -0.46
PABPC4-209ENST00000468476 NUP160Q12769 1436 aa12.21□□□□□ -0.46
PABPC4-209ENST00000468476 GPATCH8Q9UKJ3 1502 aaKnown RBP12.2□□□□□ -0.46
PABPC4-209ENST00000468476 EFCAB2Q5VUJ9 269 aa12.19□□□□□ -0.46
PABPC4-209ENST00000468476 KIF15Q9NS87 1388 aa12.19□□□□□ -0.46
PABPC4-209ENST00000468476 KDM6BO15054 1643 aa12.19□□□□□ -0.46
PABPC4-209ENST00000468476 ANKRD50Q9ULJ7 1429 aa12.19□□□□□ -0.46
PABPC4-209ENST00000468476 KIF14Q15058 1648 aa12.19□□□□□ -0.46
PABPC4-209ENST00000468476 MRS2Q9HD23 443 aa12.16□□□□□ -0.46
PABPC4-209ENST00000468476 C9orf84Q5VXU9 1444 aa12.16□□□□□ -0.46
PABPC4-209ENST00000468476 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
PABPC4-209ENST00000468476 CYB5RLQ6IPT4 315 aa12.16□□□□□ -0.46
PABPC4-209ENST00000468476 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
PABPC4-209ENST00000468476 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
PABPC4-209ENST00000468476 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.46
PABPC4-209ENST00000468476 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
PABPC4-209ENST00000468476 NCOA1Q15788 1441 aa12.15□□□□□ -0.46
PABPC4-209ENST00000468476 ERCC6L2Q5T890 1561 aa12.15□□□□□ -0.47
PABPC4-209ENST00000468476 KIF3BO15066 747 aa12.14□□□□□ -0.47
PABPC4-209ENST00000468476 SPAG9O60271 1321 aaKnown RBP12.14□□□□□ -0.47
PABPC4-209ENST00000468476 GGT6Q6P531 493 aa12.13□□□□□ -0.47
PABPC4-209ENST00000468476 PDE4CQ08493 712 aa12.13□□□□□ -0.47
PABPC4-209ENST00000468476 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
PABPC4-209ENST00000468476 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
PABPC4-209ENST00000468476 AKNAQ7Z591 1439 aa12.12□□□□□ -0.47
PABPC4-209ENST00000468476 TCOF1Q13428 1488 aaKnown RBP12.12□□□□□ -0.47
PABPC4-209ENST00000468476 NEFMP07197 916 aa12.12□□□□□ -0.47
PABPC4-209ENST00000468476 ANKRD30BQ9BXX2 1392 aa12.11□□□□□ -0.47
PABPC4-209ENST00000468476 ST20-MTHFSA0A0A6YYL1 179 aa12.1□□□□□ -0.47
PABPC4-209ENST00000468476 CHD1O14646 1710 aa12.1□□□□□ -0.47
PABPC4-209ENST00000468476 ANP32AP39687 249 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms