RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 HECW1Q76N89 1606 aa17.95■□□□□ 0.46
PRPF3-203ENST00000467514 CSRNP3Q8WYN3 585 aa17.92■□□□□ 0.46
PRPF3-203ENST00000467514 MYT1LQ9UL68 1186 aa17.92■□□□□ 0.46
PRPF3-203ENST00000467514 SOCS7O14512 581 aa17.91■□□□□ 0.46
PRPF3-203ENST00000467514 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
PRPF3-203ENST00000467514 EEA1Q15075 1411 aa17.9■□□□□ 0.46
PRPF3-203ENST00000467514 SCAPERQ9BY12 1400 aa17.9■□□□□ 0.46
PRPF3-203ENST00000467514 ILDR2Q71H61 639 aa17.9■□□□□ 0.46
PRPF3-203ENST00000467514 SPATA31D1Q6ZQQ2 1576 aa17.9■□□□□ 0.46
PRPF3-203ENST00000467514 C9orf84Q5VXU9 1444 aa17.89■□□□□ 0.46
PRPF3-203ENST00000467514 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
PRPF3-203ENST00000467514 UHRF1BP1Q6BDS2 1440 aa17.88■□□□□ 0.45
PRPF3-203ENST00000467514 ARHGEF12Q9NZN5 1544 aa17.88■□□□□ 0.45
PRPF3-203ENST00000467514 CEBPAP49715 358 aaPredicted RBP17.87■□□□□ 0.45
PRPF3-203ENST00000467514 ATP10AO60312 1499 aa17.87■□□□□ 0.45
PRPF3-203ENST00000467514 CDK13Q14004 1512 aaKnown RBP17.87■□□□□ 0.45
PRPF3-203ENST00000467514 MYO5CQ9NQX4 1742 aa17.86■□□□□ 0.45
PRPF3-203ENST00000467514 ESF1Q9H501 851 aaKnown RBP17.84■□□□□ 0.45
PRPF3-203ENST00000467514 STRCQ7RTU9 1775 aa17.84■□□□□ 0.45
PRPF3-203ENST00000467514 PLCH2O75038 1416 aa17.82■□□□□ 0.44
PRPF3-203ENST00000467514 EFCAB2Q5VUJ9 269 aa17.82■□□□□ 0.44
PRPF3-203ENST00000467514 SETD1BQ9UPS6 1966 aaKnown RBP17.8■□□□□ 0.44
PRPF3-203ENST00000467514 LOC105371045A0A1W2PR82 267 aa17.79■□□□□ 0.44
PRPF3-203ENST00000467514 ZNF518AQ6AHZ1 1483 aa17.79■□□□□ 0.44
PRPF3-203ENST00000467514 ARHGAP5Q13017 1502 aa17.78■□□□□ 0.44
PRPF3-203ENST00000467514 KIF14Q15058 1648 aa17.78■□□□□ 0.44
PRPF3-203ENST00000467514 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.44
PRPF3-203ENST00000467514 C3P01024 1663 aa17.75■□□□□ 0.43
PRPF3-203ENST00000467514 PTPRTO14522 1441 aa17.73■□□□□ 0.43
PRPF3-203ENST00000467514 CLIP1P30622 1438 aa17.72■□□□□ 0.43
PRPF3-203ENST00000467514 DIP2CQ9Y2E4 1556 aa17.72■□□□□ 0.43
PRPF3-203ENST00000467514 AFAP1Q8N556 730 aa17.72■□□□□ 0.43
PRPF3-203ENST00000467514 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
PRPF3-203ENST00000467514 KDM5CP41229 1560 aa17.71■□□□□ 0.43
PRPF3-203ENST00000467514 FMN1Q68DA7 1419 aa17.71■□□□□ 0.43
PRPF3-203ENST00000467514 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
PRPF3-203ENST00000467514 UBTFP17480 764 aaKnown RBP17.67■□□□□ 0.42
PRPF3-203ENST00000467514 IQSEC2Q5JU85 1478 aa17.67■□□□□ 0.42
PRPF3-203ENST00000467514 REREQ9P2R6 1566 aa17.66■□□□□ 0.42
PRPF3-203ENST00000467514 TRAPPC8Q9Y2L5 1435 aa17.66■□□□□ 0.42
PRPF3-203ENST00000467514 TROQ12816 1431 aaPredicted RBP17.65■□□□□ 0.42
PRPF3-203ENST00000467514 LTBP4Q8N2S1 1624 aa17.65■□□□□ 0.42
PRPF3-203ENST00000467514 NCOA1Q15788 1441 aa17.64■□□□□ 0.41
PRPF3-203ENST00000467514 CNTLNQ9NXG0 1405 aa17.64■□□□□ 0.41
PRPF3-203ENST00000467514 CAMSAP1Q5T5Y3 1602 aa17.63■□□□□ 0.41
PRPF3-203ENST00000467514 UBAP1LF5GYI3 381 aa17.63■□□□□ 0.41
PRPF3-203ENST00000467514 SUPT6HQ7KZ85 1726 aaKnown RBP17.63■□□□□ 0.41
PRPF3-203ENST00000467514 CDC42BPBQ9Y5S2 1711 aa17.63■□□□□ 0.41
PRPF3-203ENST00000467514 ITSN2Q9NZM3 1697 aa17.62■□□□□ 0.41
PRPF3-203ENST00000467514 MLH3Q9UHC1 1453 aa17.62■□□□□ 0.41
PRPF3-203ENST00000467514 AGLP35573 1532 aa17.62■□□□□ 0.41
PRPF3-203ENST00000467514 PREX2Q70Z35 1606 aa17.61■□□□□ 0.41
PRPF3-203ENST00000467514 ABCC1P33527 1531 aa17.6■□□□□ 0.41
PRPF3-203ENST00000467514 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
PRPF3-203ENST00000467514 MROH2AA6NES4 1674 aa17.58■□□□□ 0.4
PRPF3-203ENST00000467514 KIDINS220Q9ULH0 1771 aa17.56■□□□□ 0.4
PRPF3-203ENST00000467514 LRRIQ1Q96JM4 1722 aa17.56■□□□□ 0.4
PRPF3-203ENST00000467514 ZNF335Q9H4Z2 1342 aaPredicted RBP17.56■□□□□ 0.4
PRPF3-203ENST00000467514 NCKAP5LQ9HCH0 1330 aa17.56■□□□□ 0.4
PRPF3-203ENST00000467514 ARHGAP35Q9NRY4 1499 aa17.56■□□□□ 0.4
PRPF3-203ENST00000467514 ZNF777Q9ULD5 760 aaPredicted RBP17.55■□□□□ 0.4
PRPF3-203ENST00000467514 NPATQ14207 1427 aa17.55■□□□□ 0.4
PRPF3-203ENST00000467514 CLTCQ00610 1675 aaKnown RBP17.53■□□□□ 0.4
PRPF3-203ENST00000467514 MYO3AQ8NEV4 1616 aa17.53■□□□□ 0.4
PRPF3-203ENST00000467514 CCDC18Q5T9S5 1454 aa17.51■□□□□ 0.39
PRPF3-203ENST00000467514 CDC42BPAQ5VT25 1732 aa17.51■□□□□ 0.39
PRPF3-203ENST00000467514 ZNF142P52746 1687 aaPredicted RBP17.51■□□□□ 0.39
PRPF3-203ENST00000467514 ZMYM3Q14202 1370 aa17.51■□□□□ 0.39
PRPF3-203ENST00000467514 PKD2Q13563 968 aa17.5■□□□□ 0.39
PRPF3-203ENST00000467514 SPAG9O60271 1321 aaKnown RBP17.49■□□□□ 0.39
PRPF3-203ENST00000467514 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
PRPF3-203ENST00000467514 CEP170BQ9Y4F5 1589 aaPredicted RBP17.49■□□□□ 0.39
PRPF3-203ENST00000467514 SYCP2Q9BX26 1530 aa17.48■□□□□ 0.39
PRPF3-203ENST00000467514 PIP4K2BP78356 416 aa17.48■□□□□ 0.39
PRPF3-203ENST00000467514 PPP6R1Q9UPN7 881 aa17.48■□□□□ 0.39
PRPF3-203ENST00000467514 PLA2R1Q13018 1463 aa17.47■□□□□ 0.39
PRPF3-203ENST00000467514 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.39
PRPF3-203ENST00000467514 GGT6Q6P531 493 aa17.45■□□□□ 0.38
PRPF3-203ENST00000467514 ATP7AQ04656 1500 aa17.45■□□□□ 0.38
PRPF3-203ENST00000467514 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
PRPF3-203ENST00000467514 CEP162Q5TB80 1403 aa17.43■□□□□ 0.38
PRPF3-203ENST00000467514 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.38
PRPF3-203ENST00000467514 TCOF1Q13428 1488 aaKnown RBP17.42■□□□□ 0.38
PRPF3-203ENST00000467514 CASKIN1Q8WXD9 1431 aa17.41■□□□□ 0.38
PRPF3-203ENST00000467514 TOM1O60784 492 aa17.41■□□□□ 0.38
PRPF3-203ENST00000467514 HSPA1LP34931 641 aa17.41■□□□□ 0.38
PRPF3-203ENST00000467514 A2MP01023 1474 aa17.41■□□□□ 0.38
PRPF3-203ENST00000467514 POLR1AO95602 1720 aaPredicted RBP17.4■□□□□ 0.38
PRPF3-203ENST00000467514 PTPRKQ15262 1439 aa17.39■□□□□ 0.38
PRPF3-203ENST00000467514 PLEKHH2Q8IVE3 1493 aa17.38■□□□□ 0.37
PRPF3-203ENST00000467514 PLXNC1O60486 1568 aa17.38■□□□□ 0.37
PRPF3-203ENST00000467514 INO80Q9ULG1 1556 aaPredicted RBP17.38■□□□□ 0.37
PRPF3-203ENST00000467514 ADGBQ8N7X0 1667 aa17.38■□□□□ 0.37
PRPF3-203ENST00000467514 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
PRPF3-203ENST00000467514 A2ML1A8K2U0 1454 aa17.37■□□□□ 0.37
PRPF3-203ENST00000467514 CPS1P31327 1500 aa17.37■□□□□ 0.37
PRPF3-203ENST00000467514 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
PRPF3-203ENST00000467514 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
PRPF3-203ENST00000467514 DNMT1P26358 1616 aaKnown RBP17.35■□□□□ 0.37
PRPF3-203ENST00000467514 CCNB3Q8WWL7 1395 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms