RNA–Protein interactions for RNA: ENST00000467307.1

USP30-204, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 3

Gene USP30, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-204ENST00000467307 PITPNM1O00562 1244 aa9.31□□□□□ -0.92
USP30-204ENST00000467307 OSCARQ8IYS5 282 aa9.31□□□□□ -0.92
USP30-204ENST00000467307 ANP32EQ9BTT0 268 aa9.3□□□□□ -0.92
USP30-204ENST00000467307 NAIPQ13075 1403 aa9.3□□□□□ -0.92
USP30-204ENST00000467307 ARID4BQ4LE39 1312 aaPredicted RBP9.3□□□□□ -0.92
USP30-204ENST00000467307 NCOA2Q15596 1464 aa9.28□□□□□ -0.92
USP30-204ENST00000467307 FXR2P51116 673 aaKnown RBP eCLIP9.28□□□□□ -0.92
USP30-204ENST00000467307 POLR1AO95602 1720 aaPredicted RBP9.27□□□□□ -0.93
USP30-204ENST00000467307 GAPVD1Q14C86 1478 aa9.27□□□□□ -0.93
USP30-204ENST00000467307 FHOD3Q2V2M9 1422 aa9.26□□□□□ -0.93
USP30-204ENST00000467307 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
USP30-204ENST00000467307 FANCIQ9NVI1 1328 aa9.25□□□□□ -0.93
USP30-204ENST00000467307 FAM50AQ14320 339 aaKnown RBP9.24□□□□□ -0.93
USP30-204ENST00000467307 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
USP30-204ENST00000467307 KTN1Q86UP2 1357 aaKnown RBP9.24□□□□□ -0.93
USP30-204ENST00000467307 ATXN8OSP0DMR3 200 aa9.23□□□□□ -0.93
USP30-204ENST00000467307 IQGAP2Q13576 1575 aa9.22□□□□□ -0.93
USP30-204ENST00000467307 ROCK2O75116 1388 aaKnown RBP9.21□□□□□ -0.94
USP30-204ENST00000467307 CNTLNQ9NXG0 1405 aa9.21□□□□□ -0.94
USP30-204ENST00000467307 KDM5BQ9UGL1 1544 aa9.21□□□□□ -0.94
USP30-204ENST00000467307 EIF4G2P78344 907 aaKnown RBP eCLIP9.2□□□□□ -0.94
USP30-204ENST00000467307 NCOA1Q15788 1441 aa9.2□□□□□ -0.94
USP30-204ENST00000467307 RPRD2Q5VT52 1461 aaKnown RBP9.2□□□□□ -0.94
USP30-204ENST00000467307 RANGAP1P46060 587 aaPredicted RBP9.19□□□□□ -0.94
USP30-204ENST00000467307 DDX10Q13206 875 aaKnown RBP9.19□□□□□ -0.94
USP30-204ENST00000467307 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
USP30-204ENST00000467307 INSRP06213 1382 aa9.19□□□□□ -0.94
USP30-204ENST00000467307 URB2Q14146 1524 aaKnown RBP9.19□□□□□ -0.94
USP30-204ENST00000467307 NESP48681 1621 aa9.19□□□□□ -0.94
USP30-204ENST00000467307 EPRSP07814 1512 aaKnown RBP9.18□□□□□ -0.94
USP30-204ENST00000467307 DNMT1P26358 1616 aaKnown RBP9.18□□□□□ -0.94
USP30-204ENST00000467307 TARBP1Q13395 1621 aaKnown RBP9.18□□□□□ -0.94
USP30-204ENST00000467307 ZMYM4Q5VZL5 1548 aa9.18□□□□□ -0.94
USP30-204ENST00000467307 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
USP30-204ENST00000467307 WDR62O43379 1518 aa9.17□□□□□ -0.94
USP30-204ENST00000467307 ADGRL2O95490 1459 aa9.17□□□□□ -0.94
USP30-204ENST00000467307 RAD54L2Q9Y4B4 1467 aa9.17□□□□□ -0.94
USP30-204ENST00000467307 ZBED9Q6R2W3 1325 aa9.17□□□□□ -0.94
USP30-204ENST00000467307 ADAMTS12P58397 1594 aa9.16□□□□□ -0.94
USP30-204ENST00000467307 FKBP8Q14318 412 aa9.16□□□□□ -0.94
USP30-204ENST00000467307 LRRIQ1Q96JM4 1722 aa9.15□□□□□ -0.94
USP30-204ENST00000467307 ITGAEP38570 1179 aa9.15□□□□□ -0.94
USP30-204ENST00000467307 PPP4R2Q9NY27 417 aa9.15□□□□□ -0.94
USP30-204ENST00000467307 PBRM1Q86U86 1689 aa9.15□□□□□ -0.94
USP30-204ENST00000467307 KIAA0586Q9BVV6 1533 aa9.15□□□□□ -0.95
USP30-204ENST00000467307 ARHGEF12Q9NZN5 1544 aa9.15□□□□□ -0.95
USP30-204ENST00000467307 SHANK2Q9UPX8 1470 aa9.15□□□□□ -0.95
USP30-204ENST00000467307 PTPRKQ15262 1439 aa9.14□□□□□ -0.95
USP30-204ENST00000467307 ADCY10Q96PN6 1610 aa9.14□□□□□ -0.95
USP30-204ENST00000467307 SIN3AQ96ST3 1273 aa9.14□□□□□ -0.95
USP30-204ENST00000467307 SPATA31E1Q6ZUB1 1445 aa9.14□□□□□ -0.95
USP30-204ENST00000467307 ADGBQ8N7X0 1667 aa9.13□□□□□ -0.95
USP30-204ENST00000467307 ANKRD30BQ9BXX2 1392 aa9.13□□□□□ -0.95
USP30-204ENST00000467307 IFT140Q96RY7 1462 aa9.13□□□□□ -0.95
USP30-204ENST00000467307 RBM19Q9Y4C8 960 aaKnown RBP9.12□□□□□ -0.95
USP30-204ENST00000467307 TEX14Q8IWB6 1497 aa9.12□□□□□ -0.95
USP30-204ENST00000467307 DAPK1P53355 1430 aa9.12□□□□□ -0.95
USP30-204ENST00000467307 UHRF1BP1Q6BDS2 1440 aa9.12□□□□□ -0.95
USP30-204ENST00000467307 KDM5DQ9BY66 1539 aa9.11□□□□□ -0.95
USP30-204ENST00000467307 CCDC7Q96M83 1385 aa9.11□□□□□ -0.95
USP30-204ENST00000467307 KIAA0556O60303 1618 aa9.09□□□□□ -0.95
USP30-204ENST00000467307 KIF14Q15058 1648 aa9.09□□□□□ -0.95
USP30-204ENST00000467307 MRC2Q9UBG0 1479 aa9.09□□□□□ -0.95
USP30-204ENST00000467307 MPHOSPH9Q99550 1183 aa9.09□□□□□ -0.95
USP30-204ENST00000467307 PRKRIP1Q9H875 184 aaPredicted RBP9.09□□□□□ -0.95
USP30-204ENST00000467307 MBD5Q9P267 1494 aa9.08□□□□□ -0.96
USP30-204ENST00000467307 WASHC2AQ641Q2 1341 aa9.08□□□□□ -0.96
USP30-204ENST00000467307 WASHC2CQ9Y4E1 1318 aa9.08□□□□□ -0.96
USP30-204ENST00000467307 TROQ12816 1431 aaPredicted RBP9.08□□□□□ -0.96
USP30-204ENST00000467307 SMG6Q86US8 1419 aaKnown RBP9.08□□□□□ -0.96
USP30-204ENST00000467307 RSPH4AQ5TD94 716 aa9.08□□□□□ -0.96
USP30-204ENST00000467307 RAPGEF6Q8TEU7 1601 aa9.08□□□□□ -0.96
USP30-204ENST00000467307 DENND4BO75064 1496 aaPredicted RBP9.08□□□□□ -0.96
USP30-204ENST00000467307 MAGI1Q96QZ7 1491 aaPredicted RBP9.08□□□□□ -0.96
USP30-204ENST00000467307 RNF123Q5XPI4 1314 aa9.07□□□□□ -0.96
USP30-204ENST00000467307 CROCC2H7BZ55 1655 aa9.07□□□□□ -0.96
USP30-204ENST00000467307 MAGI3Q5TCQ9 1506 aa9.07□□□□□ -0.96
USP30-204ENST00000467307 KIAA1107Q9UPP5 1409 aa9.06□□□□□ -0.96
USP30-204ENST00000467307 HSPA5P11021 654 aaKnown RBP9.06□□□□□ -0.96
USP30-204ENST00000467307 HNRNPUQ00839 825 aaKnown RBP eCLIP9.06□□□□□ -0.96
USP30-204ENST00000467307 RALGAPBQ86X10 1494 aa9.06□□□□□ -0.96
USP30-204ENST00000467307 ABCC5O15440 1437 aa9.05□□□□□ -0.96
USP30-204ENST00000467307 ANKRD30AQ9BXX3 1397 aa9.05□□□□□ -0.96
USP30-204ENST00000467307 PRKAR2AP13861 404 aaKnown RBP9.05□□□□□ -0.96
USP30-204ENST00000467307 LAMC1P11047 1609 aa9.05□□□□□ -0.96
USP30-204ENST00000467307 PDE3BQ13370 1112 aa9.04□□□□□ -0.96
USP30-204ENST00000467307 ERICH6Q7L0X2 663 aa9.04□□□□□ -0.96
USP30-204ENST00000467307 STAC3Q96MF2 364 aa9.04□□□□□ -0.96
USP30-204ENST00000467307 ATP1B4Q9UN42 357 aaPredicted RBP9.04□□□□□ -0.96
USP30-204ENST00000467307 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
USP30-204ENST00000467307 ARHGEF5Q12774 1597 aa9.03□□□□□ -0.96
USP30-204ENST00000467307 PLEKHH2Q8IVE3 1493 aa9.03□□□□□ -0.96
USP30-204ENST00000467307 TDRD9Q8NDG6 1382 aaKnown RBP9.03□□□□□ -0.96
USP30-204ENST00000467307 BRD4O60885 1362 aaPredicted RBP9.02□□□□□ -0.97
USP30-204ENST00000467307 DISP1Q96F81 1524 aa9.02□□□□□ -0.97
USP30-204ENST00000467307 SLC24A1O60721 1099 aa9.02□□□□□ -0.97
USP30-204ENST00000467307 RALBP1Q15311 655 aa9.02□□□□□ -0.97
USP30-204ENST00000467307 TRIM52Q96A61 297 aa9.02□□□□□ -0.97
USP30-204ENST00000467307 PTPRGP23470 1445 aa9.02□□□□□ -0.97
USP30-204ENST00000467307 NUP153P49790 1475 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms