RNA–Protein interactions for RNA: ENST00000467216.2

COL21A1-207, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 5

Gene COL21A1, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-207ENST00000467216 CDK13Q14004 1512 aaKnown RBP22.2■■□□□ 1.14
COL21A1-207ENST00000467216 EFCAB2Q5VUJ9 269 aa22.19■■□□□ 1.14
COL21A1-207ENST00000467216 PLCH2O75038 1416 aa22.19■■□□□ 1.14
COL21A1-207ENST00000467216 EHMT2Q96KQ7 1210 aa22.18■■□□□ 1.14
COL21A1-207ENST00000467216 MYT1LQ9UL68 1186 aa22.18■■□□□ 1.14
COL21A1-207ENST00000467216 HECW1Q76N89 1606 aa22.17■■□□□ 1.14
COL21A1-207ENST00000467216 FMN1Q68DA7 1419 aa22.15■■□□□ 1.14
COL21A1-207ENST00000467216 ATP10AO60312 1499 aa22.14■■□□□ 1.13
COL21A1-207ENST00000467216 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.13
COL21A1-207ENST00000467216 CERKQ8TCT0 537 aa22.13■■□□□ 1.13
COL21A1-207ENST00000467216 FER1L4A9Z1Z3 1794 aa22.12■■□□□ 1.13
COL21A1-207ENST00000467216 CLIP1P30622 1438 aa22.08■■□□□ 1.13
COL21A1-207ENST00000467216 SIGLEC1Q9BZZ2 1709 aa22.07■■□□□ 1.12
COL21A1-207ENST00000467216 ZNF518AQ6AHZ1 1483 aa22.07■■□□□ 1.12
COL21A1-207ENST00000467216 MYO5CQ9NQX4 1742 aa22.06■■□□□ 1.12
COL21A1-207ENST00000467216 DMRT2Q9Y5R5 561 aa22.06■■□□□ 1.12
COL21A1-207ENST00000467216 ARHGAP5Q13017 1502 aa22.06■■□□□ 1.12
COL21A1-207ENST00000467216 ARHGEF12Q9NZN5 1544 aa22.06■■□□□ 1.12
COL21A1-207ENST00000467216 CEBPAP49715 358 aaPredicted RBP22.05■■□□□ 1.12
COL21A1-207ENST00000467216 ESF1Q9H501 851 aaKnown RBP22.05■■□□□ 1.12
COL21A1-207ENST00000467216 KIF14Q15058 1648 aa22.05■■□□□ 1.12
COL21A1-207ENST00000467216 AFAP1Q8N556 730 aa22.03■■□□□ 1.12
COL21A1-207ENST00000467216 TROQ12816 1431 aaPredicted RBP22.03■■□□□ 1.12
COL21A1-207ENST00000467216 UHRF1BP1Q6BDS2 1440 aa22.01■■□□□ 1.11
COL21A1-207ENST00000467216 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
COL21A1-207ENST00000467216 PREX1Q8TCU6 1659 aa22■■□□□ 1.11
COL21A1-207ENST00000467216 KDM5CP41229 1560 aa21.95■■□□□ 1.1
COL21A1-207ENST00000467216 DIP2CQ9Y2E4 1556 aa21.9■■□□□ 1.1
COL21A1-207ENST00000467216 MLH3Q9UHC1 1453 aa21.9■■□□□ 1.1
COL21A1-207ENST00000467216 REREQ9P2R6 1566 aa21.88■■□□□ 1.09
COL21A1-207ENST00000467216 SETD1BQ9UPS6 1966 aaKnown RBP21.88■■□□□ 1.09
COL21A1-207ENST00000467216 CCDC18Q5T9S5 1454 aa21.88■■□□□ 1.09
COL21A1-207ENST00000467216 DISP3Q9P2K9 1392 aa21.87■■□□□ 1.09
COL21A1-207ENST00000467216 TRAPPC8Q9Y2L5 1435 aa21.85■■□□□ 1.09
COL21A1-207ENST00000467216 ABCA6Q8N139 1617 aa21.84■■□□□ 1.09
COL21A1-207ENST00000467216 CNTLNQ9NXG0 1405 aa21.84■■□□□ 1.09
COL21A1-207ENST00000467216 ZNF777Q9ULD5 760 aaPredicted RBP21.84■■□□□ 1.09
COL21A1-207ENST00000467216 ABCC1P33527 1531 aa21.84■■□□□ 1.09
COL21A1-207ENST00000467216 AGLP35573 1532 aa21.84■■□□□ 1.09
COL21A1-207ENST00000467216 PTPRTO14522 1441 aa21.83■■□□□ 1.09
COL21A1-207ENST00000467216 CASKIN1Q8WXD9 1431 aa21.83■■□□□ 1.09
COL21A1-207ENST00000467216 STRCQ7RTU9 1775 aa21.82■■□□□ 1.08
COL21A1-207ENST00000467216 PREX2Q70Z35 1606 aa21.82■■□□□ 1.08
COL21A1-207ENST00000467216 CDC42BPBQ9Y5S2 1711 aa21.82■■□□□ 1.08
COL21A1-207ENST00000467216 CHIC1Q5VXU3 224 aa21.81■■□□□ 1.08
COL21A1-207ENST00000467216 C3P01024 1663 aa21.79■■□□□ 1.08
COL21A1-207ENST00000467216 ITSN2Q9NZM3 1697 aa21.78■■□□□ 1.08
COL21A1-207ENST00000467216 SPAG9O60271 1321 aaKnown RBP21.78■■□□□ 1.08
COL21A1-207ENST00000467216 LRRIQ1Q96JM4 1722 aa21.77■■□□□ 1.08
COL21A1-207ENST00000467216 NCOA1Q15788 1441 aa21.73■■□□□ 1.07
COL21A1-207ENST00000467216 FYCO1Q9BQS8 1478 aa21.72■■□□□ 1.07
COL21A1-207ENST00000467216 KIDINS220Q9ULH0 1771 aa21.72■■□□□ 1.07
COL21A1-207ENST00000467216 NPATQ14207 1427 aa21.72■■□□□ 1.07
COL21A1-207ENST00000467216 HNRNPMP52272 730 aaKnown RBP eCLIP21.71■■□□□ 1.07
COL21A1-207ENST00000467216 CFDP1Q9UEE9 299 aaPredicted RBP21.71■■□□□ 1.07
COL21A1-207ENST00000467216 ZMYM3Q14202 1370 aa21.71■■□□□ 1.07
COL21A1-207ENST00000467216 SAMD9LQ8IVG5 1584 aa21.7■■□□□ 1.06
COL21A1-207ENST00000467216 SYCP2Q9BX26 1530 aa21.7■■□□□ 1.06
COL21A1-207ENST00000467216 CDC42BPAQ5VT25 1732 aa21.69■■□□□ 1.06
COL21A1-207ENST00000467216 SOCS7O14512 581 aa21.69■■□□□ 1.06
COL21A1-207ENST00000467216 ILDR2Q71H61 639 aa21.69■■□□□ 1.06
COL21A1-207ENST00000467216 IQSEC2Q5JU85 1478 aa21.68■■□□□ 1.06
COL21A1-207ENST00000467216 PLEKHH2Q8IVE3 1493 aa21.68■■□□□ 1.06
COL21A1-207ENST00000467216 CAMSAP1Q5T5Y3 1602 aa21.67■■□□□ 1.06
COL21A1-207ENST00000467216 CCNB3Q8WWL7 1395 aa21.67■■□□□ 1.06
COL21A1-207ENST00000467216 GPATCH8Q9UKJ3 1502 aaKnown RBP21.66■■□□□ 1.06
COL21A1-207ENST00000467216 GGT6Q6P531 493 aa21.66■■□□□ 1.06
COL21A1-207ENST00000467216 NCKAP5LQ9HCH0 1330 aa21.65■■□□□ 1.06
COL21A1-207ENST00000467216 MROH2AA6NES4 1674 aa21.65■■□□□ 1.06
COL21A1-207ENST00000467216 LTBP4Q8N2S1 1624 aa21.65■■□□□ 1.06
COL21A1-207ENST00000467216 SPATA31D1Q6ZQQ2 1576 aa21.65■■□□□ 1.06
COL21A1-207ENST00000467216 KIAA1107Q9UPP5 1409 aa21.64■■□□□ 1.06
COL21A1-207ENST00000467216 PKD2Q13563 968 aa21.64■■□□□ 1.05
COL21A1-207ENST00000467216 ATP7AQ04656 1500 aa21.64■■□□□ 1.05
COL21A1-207ENST00000467216 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
COL21A1-207ENST00000467216 A2MP01023 1474 aa21.63■■□□□ 1.05
COL21A1-207ENST00000467216 SUPT6HQ7KZ85 1726 aaKnown RBP21.63■■□□□ 1.05
COL21A1-207ENST00000467216 UBAP1LF5GYI3 381 aa21.61■■□□□ 1.05
COL21A1-207ENST00000467216 PPP6R1Q9UPN7 881 aa21.6■■□□□ 1.05
COL21A1-207ENST00000467216 ZNF335Q9H4Z2 1342 aaPredicted RBP21.59■■□□□ 1.05
COL21A1-207ENST00000467216 CLTCQ00610 1675 aaKnown RBP21.57■■□□□ 1.04
COL21A1-207ENST00000467216 PLA2R1Q13018 1463 aa21.57■■□□□ 1.04
COL21A1-207ENST00000467216 PTPRKQ15262 1439 aa21.55■■□□□ 1.04
COL21A1-207ENST00000467216 INO80Q9ULG1 1556 aaPredicted RBP21.55■■□□□ 1.04
COL21A1-207ENST00000467216 PLXNC1O60486 1568 aa21.54■■□□□ 1.04
COL21A1-207ENST00000467216 CEP170BQ9Y4F5 1589 aaPredicted RBP21.54■■□□□ 1.04
COL21A1-207ENST00000467216 MYO3AQ8NEV4 1616 aa21.54■■□□□ 1.04
COL21A1-207ENST00000467216 ZNF142P52746 1687 aaPredicted RBP21.51■■□□□ 1.03
COL21A1-207ENST00000467216 SCAF1Q9H7N4 1312 aaKnown RBP21.5■■□□□ 1.03
COL21A1-207ENST00000467216 TCOF1Q13428 1488 aaKnown RBP21.49■■□□□ 1.03
COL21A1-207ENST00000467216 ADGBQ8N7X0 1667 aa21.49■■□□□ 1.03
COL21A1-207ENST00000467216 ZNF644Q9H582 1327 aaPredicted RBP21.49■■□□□ 1.03
COL21A1-207ENST00000467216 A2ML1A8K2U0 1454 aa21.47■■□□□ 1.03
COL21A1-207ENST00000467216 KIF3BO15066 747 aa21.46■■□□□ 1.03
COL21A1-207ENST00000467216 DHX29Q7Z478 1369 aaKnown RBP21.46■■□□□ 1.03
COL21A1-207ENST00000467216 RTEL1-TNFRSF6BF6WH68 1400 aa21.46■■□□□ 1.03
COL21A1-207ENST00000467216 EHBP1L1Q8N3D4 1523 aa21.45■■□□□ 1.02
COL21A1-207ENST00000467216 TNRQ92752 1358 aa21.44■■□□□ 1.02
COL21A1-207ENST00000467216 TOM1O60784 492 aa21.43■■□□□ 1.02
COL21A1-207ENST00000467216 WASHC2CQ9Y4E1 1318 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms