RNA–Protein interactions for RNA: ENST00000467052.1

COL15A1-202, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-202ENST00000467052 YEATS2Q9ULM3 1422 aa23.58■■□□□ 1.36
COL15A1-202ENST00000467052 ARHGEF12Q9NZN5 1544 aa23.55■■□□□ 1.36
COL15A1-202ENST00000467052 MLECQ14165 292 aa23.53■■□□□ 1.36
COL15A1-202ENST00000467052 DMRT2Q9Y5R5 561 aa23.5■■□□□ 1.35
COL15A1-202ENST00000467052 SETD1BQ9UPS6 1966 aaKnown RBP23.5■■□□□ 1.35
COL15A1-202ENST00000467052 C9orf84Q5VXU9 1444 aa23.49■■□□□ 1.35
COL15A1-202ENST00000467052 UHRF1BP1Q6BDS2 1440 aa23.48■■□□□ 1.35
COL15A1-202ENST00000467052 MYO5CQ9NQX4 1742 aa23.47■■□□□ 1.35
COL15A1-202ENST00000467052 PLEKHD1A6NEE1 506 aa23.47■■□□□ 1.35
COL15A1-202ENST00000467052 ATP10AO60312 1499 aa23.43■■□□□ 1.34
COL15A1-202ENST00000467052 IQSEC2Q5JU85 1478 aa23.41■■□□□ 1.34
COL15A1-202ENST00000467052 SCAPERQ9BY12 1400 aa23.41■■□□□ 1.34
COL15A1-202ENST00000467052 C3P01024 1663 aa23.4■■□□□ 1.34
COL15A1-202ENST00000467052 PTPRTO14522 1441 aa23.39■■□□□ 1.33
COL15A1-202ENST00000467052 PLCH2O75038 1416 aa23.34■■□□□ 1.33
COL15A1-202ENST00000467052 LTBP4Q8N2S1 1624 aa23.34■■□□□ 1.33
COL15A1-202ENST00000467052 CDK13Q14004 1512 aaKnown RBP23.33■■□□□ 1.33
COL15A1-202ENST00000467052 ZNF518AQ6AHZ1 1483 aa23.33■■□□□ 1.33
COL15A1-202ENST00000467052 CEBPAP49715 358 aaPredicted RBP23.33■■□□□ 1.33
COL15A1-202ENST00000467052 KDM5CP41229 1560 aa23.32■■□□□ 1.32
COL15A1-202ENST00000467052 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
COL15A1-202ENST00000467052 DIP2CQ9Y2E4 1556 aa23.31■■□□□ 1.32
COL15A1-202ENST00000467052 RANGAP1P46060 587 aaPredicted RBP23.28■■□□□ 1.32
COL15A1-202ENST00000467052 KIF14Q15058 1648 aa23.28■■□□□ 1.32
COL15A1-202ENST00000467052 ABCA6Q8N139 1617 aa23.27■■□□□ 1.32
COL15A1-202ENST00000467052 ARHGAP5Q13017 1502 aa23.23■■□□□ 1.31
COL15A1-202ENST00000467052 SUPT6HQ7KZ85 1726 aaKnown RBP23.23■■□□□ 1.31
COL15A1-202ENST00000467052 NCOA1Q15788 1441 aa23.23■■□□□ 1.31
COL15A1-202ENST00000467052 EFCAB2Q5VUJ9 269 aa23.22■■□□□ 1.31
COL15A1-202ENST00000467052 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
COL15A1-202ENST00000467052 MROH2AA6NES4 1674 aa23.2■■□□□ 1.3
COL15A1-202ENST00000467052 AGLP35573 1532 aa23.2■■□□□ 1.3
COL15A1-202ENST00000467052 ESF1Q9H501 851 aaKnown RBP23.19■■□□□ 1.3
COL15A1-202ENST00000467052 MYT1LQ9UL68 1186 aa23.19■■□□□ 1.3
COL15A1-202ENST00000467052 TRAPPC8Q9Y2L5 1435 aa23.18■■□□□ 1.3
COL15A1-202ENST00000467052 CAMSAP1Q5T5Y3 1602 aa23.18■■□□□ 1.3
COL15A1-202ENST00000467052 ITSN2Q9NZM3 1697 aa23.16■■□□□ 1.3
COL15A1-202ENST00000467052 CDC42BPBQ9Y5S2 1711 aa23.16■■□□□ 1.3
COL15A1-202ENST00000467052 EEA1Q15075 1411 aa23.16■■□□□ 1.3
COL15A1-202ENST00000467052 CNTLNQ9NXG0 1405 aa23.15■■□□□ 1.3
COL15A1-202ENST00000467052 ZNF142P52746 1687 aaPredicted RBP23.14■■□□□ 1.29
COL15A1-202ENST00000467052 MLH3Q9UHC1 1453 aa23.13■■□□□ 1.29
COL15A1-202ENST00000467052 PREX2Q70Z35 1606 aa23.12■■□□□ 1.29
COL15A1-202ENST00000467052 CLIP1P30622 1438 aa23.1■■□□□ 1.29
COL15A1-202ENST00000467052 ABCC1P33527 1531 aa23.1■■□□□ 1.29
COL15A1-202ENST00000467052 MYO3AQ8NEV4 1616 aa23.1■■□□□ 1.29
COL15A1-202ENST00000467052 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
COL15A1-202ENST00000467052 CDK11AQ9UQ88 783 aaPredicted RBP23.09■■□□□ 1.29
COL15A1-202ENST00000467052 FMN1Q68DA7 1419 aa23.08■■□□□ 1.29
COL15A1-202ENST00000467052 UBAP1LF5GYI3 381 aa23.08■■□□□ 1.29
COL15A1-202ENST00000467052 AFAP1Q8N556 730 aa23.08■■□□□ 1.29
COL15A1-202ENST00000467052 MED1Q15648 1581 aaPredicted RBP23.08■■□□□ 1.29
COL15A1-202ENST00000467052 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.28
COL15A1-202ENST00000467052 NPATQ14207 1427 aa23.08■■□□□ 1.28
COL15A1-202ENST00000467052 LRRIQ1Q96JM4 1722 aa23.06■■□□□ 1.28
COL15A1-202ENST00000467052 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
COL15A1-202ENST00000467052 PLA2R1Q13018 1463 aa23.03■■□□□ 1.28
COL15A1-202ENST00000467052 CLTCQ00610 1675 aaKnown RBP23.03■■□□□ 1.28
COL15A1-202ENST00000467052 ZNF335Q9H4Z2 1342 aaPredicted RBP23.02■■□□□ 1.28
COL15A1-202ENST00000467052 CEP170BQ9Y4F5 1589 aaPredicted RBP23.01■■□□□ 1.27
COL15A1-202ENST00000467052 CDC42BPAQ5VT25 1732 aa22.99■■□□□ 1.27
COL15A1-202ENST00000467052 POLR1AO95602 1720 aaPredicted RBP22.97■■□□□ 1.27
COL15A1-202ENST00000467052 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
COL15A1-202ENST00000467052 NCKAP5LQ9HCH0 1330 aa22.95■■□□□ 1.26
COL15A1-202ENST00000467052 PKD2Q13563 968 aa22.94■■□□□ 1.26
COL15A1-202ENST00000467052 SAMD9LQ8IVG5 1584 aa22.93■■□□□ 1.26
COL15A1-202ENST00000467052 SCAF1Q9H7N4 1312 aaKnown RBP22.91■■□□□ 1.26
COL15A1-202ENST00000467052 ARHGAP35Q9NRY4 1499 aa22.91■■□□□ 1.26
COL15A1-202ENST00000467052 ZMYM3Q14202 1370 aa22.9■■□□□ 1.26
COL15A1-202ENST00000467052 CPS1P31327 1500 aa22.88■■□□□ 1.25
COL15A1-202ENST00000467052 PLXNC1O60486 1568 aa22.88■■□□□ 1.25
COL15A1-202ENST00000467052 CCDC18Q5T9S5 1454 aa22.87■■□□□ 1.25
COL15A1-202ENST00000467052 PPP6R1Q9UPN7 881 aa22.87■■□□□ 1.25
COL15A1-202ENST00000467052 ATP7AQ04656 1500 aa22.87■■□□□ 1.25
COL15A1-202ENST00000467052 SYCP2Q9BX26 1530 aa22.87■■□□□ 1.25
COL15A1-202ENST00000467052 INO80Q9ULG1 1556 aaPredicted RBP22.86■■□□□ 1.25
COL15A1-202ENST00000467052 HSPA1LP34931 641 aa22.84■■□□□ 1.25
COL15A1-202ENST00000467052 PHF23Q9BUL5 403 aaPredicted RBP22.84■■□□□ 1.25
COL15A1-202ENST00000467052 PTPRKQ15262 1439 aa22.83■■□□□ 1.25
COL15A1-202ENST00000467052 DNMT1P26358 1616 aaKnown RBP22.83■■□□□ 1.25
COL15A1-202ENST00000467052 ADGBQ8N7X0 1667 aa22.83■■□□□ 1.24
COL15A1-202ENST00000467052 PIP4K2BP78356 416 aa22.82■■□□□ 1.24
COL15A1-202ENST00000467052 TOM1O60784 492 aa22.81■■□□□ 1.24
COL15A1-202ENST00000467052 A2ML1A8K2U0 1454 aa22.8■■□□□ 1.24
COL15A1-202ENST00000467052 NEURL4Q96JN8 1562 aa22.79■■□□□ 1.24
COL15A1-202ENST00000467052 A2MP01023 1474 aa22.79■■□□□ 1.24
COL15A1-202ENST00000467052 SPAG9O60271 1321 aaKnown RBP22.78■■□□□ 1.24
COL15A1-202ENST00000467052 UBTFP17480 764 aaKnown RBP22.77■■□□□ 1.24
COL15A1-202ENST00000467052 SHANK2Q9UPX8 1470 aa22.75■■□□□ 1.23
COL15A1-202ENST00000467052 PLEKHH2Q8IVE3 1493 aa22.73■■□□□ 1.23
COL15A1-202ENST00000467052 ZNF777Q9ULD5 760 aaPredicted RBP22.72■■□□□ 1.23
COL15A1-202ENST00000467052 CASKIN1Q8WXD9 1431 aa22.71■■□□□ 1.23
COL15A1-202ENST00000467052 VWDEQ8N2E2 1590 aa22.7■■□□□ 1.22
COL15A1-202ENST00000467052 RNF17Q9BXT8 1623 aaKnown RBP22.7■■□□□ 1.22
COL15A1-202ENST00000467052 SYNMO15061 1565 aa22.68■■□□□ 1.22
COL15A1-202ENST00000467052 GGT6Q6P531 493 aa22.68■■□□□ 1.22
COL15A1-202ENST00000467052 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
COL15A1-202ENST00000467052 ALKQ9UM73 1620 aa22.68■■□□□ 1.22
COL15A1-202ENST00000467052 IQGAP1P46940 1657 aa22.67■■□□□ 1.22
COL15A1-202ENST00000467052 DEPDC5O75140 1603 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms