RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 EFCAB2Q5VUJ9 269 aa14.19□□□□□ -0.14
DDR1-242ENST00000465966 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
DDR1-242ENST00000465966 ATP1B4Q9UN42 357 aaPredicted RBP14.18□□□□□ -0.14
DDR1-242ENST00000465966 ATP10AO60312 1499 aa14.17□□□□□ -0.14
DDR1-242ENST00000465966 MYT1LQ9UL68 1186 aa14.16□□□□□ -0.14
DDR1-242ENST00000465966 C9orf84Q5VXU9 1444 aa14.15□□□□□ -0.14
DDR1-242ENST00000465966 HECW1Q76N89 1606 aa14.15□□□□□ -0.14
DDR1-242ENST00000465966 TTC37Q6PGP7 1564 aa14.15□□□□□ -0.14
DDR1-242ENST00000465966 CEBPAP49715 358 aaPredicted RBP14.14□□□□□ -0.15
DDR1-242ENST00000465966 CDK13Q14004 1512 aaKnown RBP14.12□□□□□ -0.15
DDR1-242ENST00000465966 ARHGEF12Q9NZN5 1544 aa14.12□□□□□ -0.15
DDR1-242ENST00000465966 ESF1Q9H501 851 aaKnown RBP14.12□□□□□ -0.15
DDR1-242ENST00000465966 DISP3Q9P2K9 1392 aa14.11□□□□□ -0.15
DDR1-242ENST00000465966 UBTFP17480 764 aaKnown RBP14.11□□□□□ -0.15
DDR1-242ENST00000465966 FMN1Q68DA7 1419 aa14.11□□□□□ -0.15
DDR1-242ENST00000465966 UHRF1BP1Q6BDS2 1440 aa14.1□□□□□ -0.15
DDR1-242ENST00000465966 AFAP1Q8N556 730 aa14.1□□□□□ -0.15
DDR1-242ENST00000465966 ZNF518AQ6AHZ1 1483 aa14.1□□□□□ -0.15
DDR1-242ENST00000465966 FER1L4A9Z1Z3 1794 aa14.09□□□□□ -0.15
DDR1-242ENST00000465966 SIGLEC1Q9BZZ2 1709 aa14.08□□□□□ -0.16
DDR1-242ENST00000465966 CLIP1P30622 1438 aa14.07□□□□□ -0.16
DDR1-242ENST00000465966 EHMT2Q96KQ7 1210 aa14.06□□□□□ -0.16
DDR1-242ENST00000465966 SOCS7O14512 581 aa14.05□□□□□ -0.16
DDR1-242ENST00000465966 TROQ12816 1431 aaPredicted RBP14.05□□□□□ -0.16
DDR1-242ENST00000465966 ARHGAP5Q13017 1502 aa14.05□□□□□ -0.16
DDR1-242ENST00000465966 PREX1Q8TCU6 1659 aa14.04□□□□□ -0.16
DDR1-242ENST00000465966 ILDR2Q71H61 639 aa14.03□□□□□ -0.16
DDR1-242ENST00000465966 PTPRTO14522 1441 aa14.03□□□□□ -0.16
DDR1-242ENST00000465966 KIF14Q15058 1648 aa14.01□□□□□ -0.17
DDR1-242ENST00000465966 MLH3Q9UHC1 1453 aa14□□□□□ -0.17
DDR1-242ENST00000465966 TRAPPC8Q9Y2L5 1435 aa14□□□□□ -0.17
DDR1-242ENST00000465966 MYO5CQ9NQX4 1742 aa14□□□□□ -0.17
DDR1-242ENST00000465966 KDM5CP41229 1560 aa14□□□□□ -0.17
DDR1-242ENST00000465966 ARHGAP35Q9NRY4 1499 aa13.99□□□□□ -0.17
DDR1-242ENST00000465966 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
DDR1-242ENST00000465966 REREQ9P2R6 1566 aa13.98□□□□□ -0.17
DDR1-242ENST00000465966 DIP2CQ9Y2E4 1556 aa13.96□□□□□ -0.17
DDR1-242ENST00000465966 AGLP35573 1532 aa13.96□□□□□ -0.17
DDR1-242ENST00000465966 STRCQ7RTU9 1775 aa13.96□□□□□ -0.18
DDR1-242ENST00000465966 IQSEC2Q5JU85 1478 aa13.93□□□□□ -0.18
DDR1-242ENST00000465966 SETD1BQ9UPS6 1966 aaKnown RBP13.93□□□□□ -0.18
DDR1-242ENST00000465966 NCOA1Q15788 1441 aa13.93□□□□□ -0.18
DDR1-242ENST00000465966 ZNF777Q9ULD5 760 aaPredicted RBP13.93□□□□□ -0.18
DDR1-242ENST00000465966 NPATQ14207 1427 aa13.91□□□□□ -0.18
DDR1-242ENST00000465966 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
DDR1-242ENST00000465966 ZMYM3Q14202 1370 aa13.91□□□□□ -0.18
DDR1-242ENST00000465966 CCDC18Q5T9S5 1454 aa13.91□□□□□ -0.18
DDR1-242ENST00000465966 SPATA31D1Q6ZQQ2 1576 aa13.91□□□□□ -0.18
DDR1-242ENST00000465966 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.18
DDR1-242ENST00000465966 ABCC1P33527 1531 aa13.9□□□□□ -0.18
DDR1-242ENST00000465966 PKD2Q13563 968 aa13.9□□□□□ -0.18
DDR1-242ENST00000465966 LTBP4Q8N2S1 1624 aa13.9□□□□□ -0.19
DDR1-242ENST00000465966 CASKIN1Q8WXD9 1431 aa13.9□□□□□ -0.19
DDR1-242ENST00000465966 C3P01024 1663 aa13.89□□□□□ -0.19
DDR1-242ENST00000465966 UBAP1LF5GYI3 381 aa13.89□□□□□ -0.19
DDR1-242ENST00000465966 NCKAP5LQ9HCH0 1330 aa13.89□□□□□ -0.19
DDR1-242ENST00000465966 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.19
DDR1-242ENST00000465966 ZNF335Q9H4Z2 1342 aaPredicted RBP13.87□□□□□ -0.19
DDR1-242ENST00000465966 CAMSAP1Q5T5Y3 1602 aa13.86□□□□□ -0.19
DDR1-242ENST00000465966 PREX2Q70Z35 1606 aa13.86□□□□□ -0.19
DDR1-242ENST00000465966 CDC42BPBQ9Y5S2 1711 aa13.86□□□□□ -0.19
DDR1-242ENST00000465966 GGT6Q6P531 493 aa13.85□□□□□ -0.19
DDR1-242ENST00000465966 CFDP1Q9UEE9 299 aaPredicted RBP13.85□□□□□ -0.19
DDR1-242ENST00000465966 PPP6R1Q9UPN7 881 aa13.85□□□□□ -0.19
DDR1-242ENST00000465966 ITSN2Q9NZM3 1697 aa13.83□□□□□ -0.2
DDR1-242ENST00000465966 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.2
DDR1-242ENST00000465966 SAMD9LQ8IVG5 1584 aa13.83□□□□□ -0.2
DDR1-242ENST00000465966 KIAA1107Q9UPP5 1409 aa13.82□□□□□ -0.2
DDR1-242ENST00000465966 PLA2R1Q13018 1463 aa13.82□□□□□ -0.2
DDR1-242ENST00000465966 PLEKHH2Q8IVE3 1493 aa13.81□□□□□ -0.2
DDR1-242ENST00000465966 GPATCH8Q9UKJ3 1502 aaKnown RBP13.81□□□□□ -0.2
DDR1-242ENST00000465966 CCNB3Q8WWL7 1395 aa13.81□□□□□ -0.2
DDR1-242ENST00000465966 A2MP01023 1474 aa13.8□□□□□ -0.2
DDR1-242ENST00000465966 SYCP2Q9BX26 1530 aa13.8□□□□□ -0.2
DDR1-242ENST00000465966 PTPRKQ15262 1439 aa13.8□□□□□ -0.2
DDR1-242ENST00000465966 FYCO1Q9BQS8 1478 aa13.8□□□□□ -0.2
DDR1-242ENST00000465966 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
DDR1-242ENST00000465966 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
DDR1-242ENST00000465966 TOM1O60784 492 aa13.78□□□□□ -0.2
DDR1-242ENST00000465966 TCOF1Q13428 1488 aaKnown RBP13.78□□□□□ -0.2
DDR1-242ENST00000465966 ATP7AQ04656 1500 aa13.78□□□□□ -0.2
DDR1-242ENST00000465966 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
DDR1-242ENST00000465966 CDC42BPAQ5VT25 1732 aa13.76□□□□□ -0.21
DDR1-242ENST00000465966 CEP170BQ9Y4F5 1589 aaPredicted RBP13.75□□□□□ -0.21
DDR1-242ENST00000465966 MTUS2Q5JR59 1369 aa13.75□□□□□ -0.21
DDR1-242ENST00000465966 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
DDR1-242ENST00000465966 SUPT6HQ7KZ85 1726 aaKnown RBP13.74□□□□□ -0.21
DDR1-242ENST00000465966 PLXNC1O60486 1568 aa13.74□□□□□ -0.21
DDR1-242ENST00000465966 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
DDR1-242ENST00000465966 MYO3AQ8NEV4 1616 aa13.73□□□□□ -0.21
DDR1-242ENST00000465966 HSPA1LP34931 641 aa13.73□□□□□ -0.21
DDR1-242ENST00000465966 CLTCQ00610 1675 aaKnown RBP13.72□□□□□ -0.21
DDR1-242ENST00000465966 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
DDR1-242ENST00000465966 ZNF142P52746 1687 aaPredicted RBP13.72□□□□□ -0.21
DDR1-242ENST00000465966 DHX29Q7Z478 1369 aaKnown RBP13.71□□□□□ -0.21
DDR1-242ENST00000465966 INO80Q9ULG1 1556 aaPredicted RBP13.71□□□□□ -0.21
DDR1-242ENST00000465966 KIF3BO15066 747 aa13.71□□□□□ -0.21
DDR1-242ENST00000465966 THEMISQ8N1K5 641 aaPredicted RBP13.71□□□□□ -0.21
DDR1-242ENST00000465966 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.22
DDR1-242ENST00000465966 TNRQ92752 1358 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms