RNA–Protein interactions for RNA: ENST00000465956.1

CUTA-206, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 2

Gene CUTA, Length 961 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-206ENST00000465956 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.55
CUTA-206ENST00000465956 DENND4BO75064 1496 aaPredicted RBP18.51■□□□□ 0.55
CUTA-206ENST00000465956 SIGLEC1Q9BZZ2 1709 aa18.49■□□□□ 0.55
CUTA-206ENST00000465956 POGZQ7Z3K3 1410 aa18.49■□□□□ 0.55
CUTA-206ENST00000465956 YEATS2Q9ULM3 1422 aa18.48■□□□□ 0.55
CUTA-206ENST00000465956 RICTORQ6R327 1708 aa18.47■□□□□ 0.55
CUTA-206ENST00000465956 CDK13Q14004 1512 aaKnown RBP18.47■□□□□ 0.55
CUTA-206ENST00000465956 AKNAQ7Z591 1439 aa18.47■□□□□ 0.55
CUTA-206ENST00000465956 FANCAO15360 1455 aa18.46■□□□□ 0.55
CUTA-206ENST00000465956 CCDC18Q5T9S5 1454 aa18.46■□□□□ 0.54
CUTA-206ENST00000465956 CEBPAP49715 358 aaPredicted RBP18.44■□□□□ 0.54
CUTA-206ENST00000465956 SPATA31D1Q6ZQQ2 1576 aa18.43■□□□□ 0.54
CUTA-206ENST00000465956 APLP2Q06481 763 aa18.42■□□□□ 0.54
CUTA-206ENST00000465956 FER1L4A9Z1Z3 1794 aa18.41■□□□□ 0.54
CUTA-206ENST00000465956 ZFYVE16Q7Z3T8 1539 aa18.41■□□□□ 0.54
CUTA-206ENST00000465956 PLEKHD1A6NEE1 506 aa18.39■□□□□ 0.53
CUTA-206ENST00000465956 CDK11AQ9UQ88 783 aaPredicted RBP18.39■□□□□ 0.53
CUTA-206ENST00000465956 TTC37Q6PGP7 1564 aa18.38■□□□□ 0.53
CUTA-206ENST00000465956 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
CUTA-206ENST00000465956 ZMYM4Q5VZL5 1548 aa18.37■□□□□ 0.53
CUTA-206ENST00000465956 TIAM1Q13009 1591 aa18.37■□□□□ 0.53
CUTA-206ENST00000465956 STRCQ7RTU9 1775 aa18.37■□□□□ 0.53
CUTA-206ENST00000465956 PREX1Q8TCU6 1659 aa18.35■□□□□ 0.53
CUTA-206ENST00000465956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.34■□□□□ 0.532e-7■□□□□ 10.7
CUTA-206ENST00000465956 CFAP74Q9C0B2 1584 aa18.33■□□□□ 0.52
CUTA-206ENST00000465956 MAGI2Q86UL8 1455 aa18.33■□□□□ 0.52
CUTA-206ENST00000465956 MTUS2Q5JR59 1369 aa18.32■□□□□ 0.52
CUTA-206ENST00000465956 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
CUTA-206ENST00000465956 ARHGEF12Q9NZN5 1544 aa18.32■□□□□ 0.52
CUTA-206ENST00000465956 SCAPERQ9BY12 1400 aa18.32■□□□□ 0.52
CUTA-206ENST00000465956 TROQ12816 1431 aaPredicted RBP18.31■□□□□ 0.52
CUTA-206ENST00000465956 EHBP1L1Q8N3D4 1523 aa18.29■□□□□ 0.52
CUTA-206ENST00000465956 UHRF1BP1Q6BDS2 1440 aa18.29■□□□□ 0.52
CUTA-206ENST00000465956 ATP10AO60312 1499 aa18.28■□□□□ 0.52
CUTA-206ENST00000465956 KIF14Q15058 1648 aa18.28■□□□□ 0.52
CUTA-206ENST00000465956 LRRC9Q6ZRR7 1453 aa18.26■□□□□ 0.51
CUTA-206ENST00000465956 C9orf84Q5VXU9 1444 aa18.26■□□□□ 0.51
CUTA-206ENST00000465956 SUPT6HQ7KZ85 1726 aaKnown RBP18.26■□□□□ 0.51
CUTA-206ENST00000465956 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
CUTA-206ENST00000465956 PTPRTO14522 1441 aa18.24■□□□□ 0.51
CUTA-206ENST00000465956 LTBP4Q8N2S1 1624 aa18.23■□□□□ 0.51
CUTA-206ENST00000465956 PPARGC1BQ86YN6 1023 aaKnown RBP18.22■□□□□ 0.51
CUTA-206ENST00000465956 PLCH2O75038 1416 aa18.22■□□□□ 0.51
CUTA-206ENST00000465956 SETD1BQ9UPS6 1966 aaKnown RBP18.21■□□□□ 0.51
CUTA-206ENST00000465956 MYT1LQ9UL68 1186 aa18.2■□□□□ 0.5
CUTA-206ENST00000465956 MYO5CQ9NQX4 1742 aa18.2■□□□□ 0.5
CUTA-206ENST00000465956 EFCAB2Q5VUJ9 269 aa18.18■□□□□ 0.5
CUTA-206ENST00000465956 AFAP1Q8N556 730 aa18.18■□□□□ 0.5
CUTA-206ENST00000465956 NCOA2Q15596 1464 aa18.17■□□□□ 0.5
CUTA-206ENST00000465956 CDC42BPAQ5VT25 1732 aa18.16■□□□□ 0.5
CUTA-206ENST00000465956 UBAP1LF5GYI3 381 aa18.15■□□□□ 0.5
CUTA-206ENST00000465956 C3P01024 1663 aa18.15■□□□□ 0.5
CUTA-206ENST00000465956 CCNB3Q8WWL7 1395 aa18.15■□□□□ 0.5
CUTA-206ENST00000465956 ITSN2Q9NZM3 1697 aa18.14■□□□□ 0.49
CUTA-206ENST00000465956 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.49
CUTA-206ENST00000465956 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
CUTA-206ENST00000465956 NCOA1Q15788 1441 aa18.12■□□□□ 0.49
CUTA-206ENST00000465956 PREX2Q70Z35 1606 aa18.12■□□□□ 0.49
CUTA-206ENST00000465956 CDC42BPBQ9Y5S2 1711 aa18.12■□□□□ 0.49
CUTA-206ENST00000465956 ZNF335Q9H4Z2 1342 aaPredicted RBP18.11■□□□□ 0.49
CUTA-206ENST00000465956 TRAPPC8Q9Y2L5 1435 aa18.11■□□□□ 0.49
CUTA-206ENST00000465956 ARHGAP5Q13017 1502 aa18.1■□□□□ 0.49
CUTA-206ENST00000465956 ZNF518AQ6AHZ1 1483 aa18.1■□□□□ 0.49
CUTA-206ENST00000465956 DIP2CQ9Y2E4 1556 aa18.09■□□□□ 0.49
CUTA-206ENST00000465956 NCKAP5LQ9HCH0 1330 aa18.09■□□□□ 0.49
CUTA-206ENST00000465956 GPATCH8Q9UKJ3 1502 aaKnown RBP18.08■□□□□ 0.49
CUTA-206ENST00000465956 CAMSAP1Q5T5Y3 1602 aa18.06■□□□□ 0.48
CUTA-206ENST00000465956 KDM5CP41229 1560 aa18.06■□□□□ 0.48
CUTA-206ENST00000465956 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
CUTA-206ENST00000465956 ZNF777Q9ULD5 760 aaPredicted RBP18.06■□□□□ 0.48
CUTA-206ENST00000465956 ABCA6Q8N139 1617 aa18.05■□□□□ 0.48
CUTA-206ENST00000465956 MYOM3Q5VTT5 1437 aa18.05■□□□□ 0.48
CUTA-206ENST00000465956 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
CUTA-206ENST00000465956 REREQ9P2R6 1566 aa18.02■□□□□ 0.48
CUTA-206ENST00000465956 HSPA1LP34931 641 aa18.01■□□□□ 0.47
CUTA-206ENST00000465956 MLH3Q9UHC1 1453 aa18■□□□□ 0.47
CUTA-206ENST00000465956 SAMD9LQ8IVG5 1584 aa18■□□□□ 0.47
CUTA-206ENST00000465956 AGLP35573 1532 aa17.99■□□□□ 0.47
CUTA-206ENST00000465956 PIP4K2BP78356 416 aa17.99■□□□□ 0.47
CUTA-206ENST00000465956 MIA2Q96PC5 1412 aa17.98■□□□□ 0.47
CUTA-206ENST00000465956 PTPN23Q9H3S7 1636 aa17.98■□□□□ 0.47
CUTA-206ENST00000465956 FGD6Q6ZV73 1430 aa17.98■□□□□ 0.47
CUTA-206ENST00000465956 MED1Q15648 1581 aaPredicted RBP17.97■□□□□ 0.47
CUTA-206ENST00000465956 CNTLNQ9NXG0 1405 aa17.97■□□□□ 0.47
CUTA-206ENST00000465956 CAMSAP2Q08AD1 1489 aa17.96■□□□□ 0.47
CUTA-206ENST00000465956 ZMYM3Q14202 1370 aa17.96■□□□□ 0.47
CUTA-206ENST00000465956 ZNF644Q9H582 1327 aaPredicted RBP17.96■□□□□ 0.46
CUTA-206ENST00000465956 ABCC1P33527 1531 aa17.95■□□□□ 0.46
CUTA-206ENST00000465956 PLEKHH2Q8IVE3 1493 aa17.95■□□□□ 0.46
CUTA-206ENST00000465956 FAM50AQ14320 339 aaKnown RBP17.94■□□□□ 0.46
CUTA-206ENST00000465956 NPATQ14207 1427 aa17.94■□□□□ 0.46
CUTA-206ENST00000465956 SYCP2Q9BX26 1530 aa17.93■□□□□ 0.46
CUTA-206ENST00000465956 PKD2Q13563 968 aa17.93■□□□□ 0.46
CUTA-206ENST00000465956 KIDINS220Q9ULH0 1771 aa17.92■□□□□ 0.46
CUTA-206ENST00000465956 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
CUTA-206ENST00000465956 HNRNPMP52272 730 aaKnown RBP eCLIP17.91■□□□□ 0.46
CUTA-206ENST00000465956 TCOF1Q13428 1488 aaKnown RBP17.9■□□□□ 0.46
CUTA-206ENST00000465956 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
CUTA-206ENST00000465956 KIAA1107Q9UPP5 1409 aa17.89■□□□□ 0.45
CUTA-206ENST00000465956 PLA2R1Q13018 1463 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms