RNA–Protein interactions for RNA: ENST00000465709.5

SUSD3-203, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-203ENST00000465709 HNRNPUL2Q1KMD3 747 aaKnown RBP26.22■■□□□ 1.79
SUSD3-203ENST00000465709 CEBPAP49715 358 aaPredicted RBP26.21■■□□□ 1.79
SUSD3-203ENST00000465709 SETD1BQ9UPS6 1966 aaKnown RBP26.2■■□□□ 1.79
SUSD3-203ENST00000465709 HECW1Q76N89 1606 aa26.15■■□□□ 1.78
SUSD3-203ENST00000465709 RAPGEF6Q8TEU7 1601 aa26.14■■□□□ 1.77
SUSD3-203ENST00000465709 UBAP1LF5GYI3 381 aa26.12■■□□□ 1.77
SUSD3-203ENST00000465709 P3H3Q8IVL6 736 aa26.12■■□□□ 1.77
SUSD3-203ENST00000465709 MED1Q15648 1581 aaPredicted RBP26.09■■□□□ 1.77
SUSD3-203ENST00000465709 C9orf84Q5VXU9 1444 aa26.09■■□□□ 1.77
SUSD3-203ENST00000465709 ATP10AO60312 1499 aa26.08■■□□□ 1.77
SUSD3-203ENST00000465709 NCOA1Q15788 1441 aa26.02■■□□□ 1.76
SUSD3-203ENST00000465709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.02■■□□□ 1.76
SUSD3-203ENST00000465709 PLEKHD1A6NEE1 506 aa26■■□□□ 1.75
SUSD3-203ENST00000465709 NUP153P49790 1475 aaKnown RBP25.99■■□□□ 1.75
SUSD3-203ENST00000465709 SCAPERQ9BY12 1400 aa25.98■■□□□ 1.75
SUSD3-203ENST00000465709 C3P01024 1663 aa25.98■■□□□ 1.75
SUSD3-203ENST00000465709 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
SUSD3-203ENST00000465709 SAMD9Q5K651 1589 aa25.94■■□□□ 1.74
SUSD3-203ENST00000465709 ZNF335Q9H4Z2 1342 aaPredicted RBP25.92■■□□□ 1.74
SUSD3-203ENST00000465709 TRAPPC8Q9Y2L5 1435 aa25.91■■□□□ 1.74
SUSD3-203ENST00000465709 CAMSAP1Q5T5Y3 1602 aa25.89■■□□□ 1.74
SUSD3-203ENST00000465709 HSPA1LP34931 641 aa25.89■■□□□ 1.74
SUSD3-203ENST00000465709 PRXQ9BXM0 1461 aa25.89■■□□□ 1.73
SUSD3-203ENST00000465709 SCAF1Q9H7N4 1312 aaKnown RBP25.88■■□□□ 1.73
SUSD3-203ENST00000465709 ESF1Q9H501 851 aaKnown RBP25.88■■□□□ 1.73
SUSD3-203ENST00000465709 PLCH2O75038 1416 aa25.82■■□□□ 1.72
SUSD3-203ENST00000465709 PIP4K2BP78356 416 aa25.8■■□□□ 1.72
SUSD3-203ENST00000465709 NCKAP5LQ9HCH0 1330 aa25.8■■□□□ 1.72
SUSD3-203ENST00000465709 ZNF518AQ6AHZ1 1483 aa25.79■■□□□ 1.72
SUSD3-203ENST00000465709 MYT1LQ9UL68 1186 aa25.79■■□□□ 1.72
SUSD3-203ENST00000465709 REREQ9P2R6 1566 aa25.78■■□□□ 1.72
SUSD3-203ENST00000465709 DIP2CQ9Y2E4 1556 aa25.77■■□□□ 1.72
SUSD3-203ENST00000465709 KDM5CP41229 1560 aa25.74■■□□□ 1.71
SUSD3-203ENST00000465709 EFCAB2Q5VUJ9 269 aa25.74■■□□□ 1.71
SUSD3-203ENST00000465709 MYO5CQ9NQX4 1742 aa25.74■■□□□ 1.71
SUSD3-203ENST00000465709 AGLP35573 1532 aa25.73■■□□□ 1.71
SUSD3-203ENST00000465709 CNTLNQ9NXG0 1405 aa25.73■■□□□ 1.71
SUSD3-203ENST00000465709 TOM1O60784 492 aa25.73■■□□□ 1.71
SUSD3-203ENST00000465709 PKD2Q13563 968 aa25.71■■□□□ 1.71
SUSD3-203ENST00000465709 NPATQ14207 1427 aa25.71■■□□□ 1.71
SUSD3-203ENST00000465709 SUPT6HQ7KZ85 1726 aaKnown RBP25.7■■□□□ 1.7
SUSD3-203ENST00000465709 ABCA6Q8N139 1617 aa25.69■■□□□ 1.7
SUSD3-203ENST00000465709 PLA2R1Q13018 1463 aa25.68■■□□□ 1.7
SUSD3-203ENST00000465709 AFAP1Q8N556 730 aa25.68■■□□□ 1.7
SUSD3-203ENST00000465709 PPP6R1Q9UPN7 881 aa25.66■■□□□ 1.7
SUSD3-203ENST00000465709 MROH2AA6NES4 1674 aa25.64■■□□□ 1.69
SUSD3-203ENST00000465709 ZNF142P52746 1687 aaPredicted RBP25.64■■□□□ 1.69
SUSD3-203ENST00000465709 CDK13Q14004 1512 aaKnown RBP25.63■■□□□ 1.69
SUSD3-203ENST00000465709 RANGAP1P46060 587 aaPredicted RBP25.63■■□□□ 1.69
SUSD3-203ENST00000465709 TCOF1Q13428 1488 aaKnown RBP25.63■■□□□ 1.69
SUSD3-203ENST00000465709 MYO3AQ8NEV4 1616 aa25.61■■□□□ 1.69
SUSD3-203ENST00000465709 MLH3Q9UHC1 1453 aa25.6■■□□□ 1.69
SUSD3-203ENST00000465709 CPS1P31327 1500 aa25.6■■□□□ 1.69
SUSD3-203ENST00000465709 ARHGAP5Q13017 1502 aa25.59■■□□□ 1.69
SUSD3-203ENST00000465709 CEP170BQ9Y4F5 1589 aaPredicted RBP25.57■■□□□ 1.68
SUSD3-203ENST00000465709 ZMYM3Q14202 1370 aa25.56■■□□□ 1.68
SUSD3-203ENST00000465709 PTPRKQ15262 1439 aa25.54■■□□□ 1.68
SUSD3-203ENST00000465709 KIF14Q15058 1648 aa25.5■■□□□ 1.67
SUSD3-203ENST00000465709 SHANK2Q9UPX8 1470 aa25.48■■□□□ 1.67
SUSD3-203ENST00000465709 SENP3Q9H4L4 574 aaPredicted RBP25.48■■□□□ 1.67
SUSD3-203ENST00000465709 CLTCQ00610 1675 aaKnown RBP25.45■■□□□ 1.67
SUSD3-203ENST00000465709 RGS17Q9UGC6 210 aaPredicted RBP25.45■■□□□ 1.66
SUSD3-203ENST00000465709 KIDINS220Q9ULH0 1771 aa25.45■■□□□ 1.66
SUSD3-203ENST00000465709 POLR1AO95602 1720 aaPredicted RBP25.44■■□□□ 1.66
SUSD3-203ENST00000465709 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
SUSD3-203ENST00000465709 ALKQ9UM73 1620 aa25.43■■□□□ 1.66
SUSD3-203ENST00000465709 ITSN2Q9NZM3 1697 aa25.41■■□□□ 1.66
SUSD3-203ENST00000465709 ABCC1P33527 1531 aa25.41■■□□□ 1.66
SUSD3-203ENST00000465709 CDC42BPBQ9Y5S2 1711 aa25.4■■□□□ 1.66
SUSD3-203ENST00000465709 ATP1B4Q9UN42 357 aaPredicted RBP25.39■■□□□ 1.66
SUSD3-203ENST00000465709 A2ML1A8K2U0 1454 aa25.37■■□□□ 1.65
SUSD3-203ENST00000465709 DNMT1P26358 1616 aaKnown RBP25.37■■□□□ 1.65
SUSD3-203ENST00000465709 CLIP1P30622 1438 aa25.37■■□□□ 1.65
SUSD3-203ENST00000465709 NEURL4Q96JN8 1562 aa25.36■■□□□ 1.65
SUSD3-203ENST00000465709 CSRNP3Q8WYN3 585 aa25.36■■□□□ 1.65
SUSD3-203ENST00000465709 TROQ12816 1431 aaPredicted RBP25.35■■□□□ 1.65
SUSD3-203ENST00000465709 VWDEQ8N2E2 1590 aa25.33■■□□□ 1.65
SUSD3-203ENST00000465709 PREX2Q70Z35 1606 aa25.32■■□□□ 1.64
SUSD3-203ENST00000465709 RNF17Q9BXT8 1623 aaKnown RBP25.29■■□□□ 1.64
SUSD3-203ENST00000465709 POTEAQ6S8J7 498 aa25.28■■□□□ 1.64
SUSD3-203ENST00000465709 SAMD9LQ8IVG5 1584 aa25.26■■□□□ 1.63
SUSD3-203ENST00000465709 SETD1AO15047 1707 aaKnown RBP25.26■■□□□ 1.63
SUSD3-203ENST00000465709 FMN1Q68DA7 1419 aa25.23■■□□□ 1.63
SUSD3-203ENST00000465709 GGT6Q6P531 493 aa25.23■■□□□ 1.63
SUSD3-203ENST00000465709 ANKLE2Q86XL3 938 aa25.22■■□□□ 1.63
SUSD3-203ENST00000465709 PLXNC1O60486 1568 aa25.22■■□□□ 1.63
SUSD3-203ENST00000465709 SPAG9O60271 1321 aaKnown RBP25.2■■□□□ 1.62
SUSD3-203ENST00000465709 SYNMO15061 1565 aa25.2■■□□□ 1.62
SUSD3-203ENST00000465709 LRRC7Q96NW7 1537 aa25.19■■□□□ 1.62
SUSD3-203ENST00000465709 A2MP01023 1474 aa25.18■■□□□ 1.62
SUSD3-203ENST00000465709 NPHP4O75161 1426 aaPredicted RBP25.18■■□□□ 1.62
SUSD3-203ENST00000465709 ATP7AQ04656 1500 aa25.17■■□□□ 1.62
SUSD3-203ENST00000465709 STRCP1A6NGW2 1772 aa25.15■■□□□ 1.62
SUSD3-203ENST00000465709 TNRQ92752 1358 aa25.15■■□□□ 1.62
SUSD3-203ENST00000465709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.15■■□□□ 1.62
SUSD3-203ENST00000465709 DEPDC5O75140 1603 aa25.15■■□□□ 1.62
SUSD3-203ENST00000465709 MED14O60244 1454 aa25.15■■□□□ 1.62
SUSD3-203ENST00000465709 IQGAP1P46940 1657 aa25.14■■□□□ 1.62
SUSD3-203ENST00000465709 CDC42BPAQ5VT25 1732 aa25.14■■□□□ 1.61
SUSD3-203ENST00000465709 SYCP2Q9BX26 1530 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms