RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 HECW1Q76N89 1606 aa27.05■■□□□ 1.92
SNX12-203ENST00000465030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.04■■□□□ 1.92
SNX12-203ENST00000465030 HNRNPUL2Q1KMD3 747 aaKnown RBP27.04■■□□□ 1.92
SNX12-203ENST00000465030 UBAP1LF5GYI3 381 aa27.03■■□□□ 1.92
SNX12-203ENST00000465030 MED1Q15648 1581 aaPredicted RBP27.01■■□□□ 1.91
SNX12-203ENST00000465030 SETD1BQ9UPS6 1966 aaKnown RBP27■■□□□ 1.91
SNX12-203ENST00000465030 C9orf84Q5VXU9 1444 aa26.99■■□□□ 1.91
SNX12-203ENST00000465030 P3H3Q8IVL6 736 aa26.99■■□□□ 1.91
SNX12-203ENST00000465030 ATP10AO60312 1499 aa26.99■■□□□ 1.91
SNX12-203ENST00000465030 RAPGEF6Q8TEU7 1601 aa26.98■■□□□ 1.91
SNX12-203ENST00000465030 NCOA1Q15788 1441 aa26.97■■□□□ 1.91
SNX12-203ENST00000465030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.92■■□□□ 1.9
SNX12-203ENST00000465030 NUP153P49790 1475 aaKnown RBP26.92■■□□□ 1.9
SNX12-203ENST00000465030 SCAPERQ9BY12 1400 aa26.89■■□□□ 1.89
SNX12-203ENST00000465030 PLEKHD1A6NEE1 506 aa26.87■■□□□ 1.89
SNX12-203ENST00000465030 ZNF335Q9H4Z2 1342 aaPredicted RBP26.87■■□□□ 1.89
SNX12-203ENST00000465030 TRAPPC8Q9Y2L5 1435 aa26.83■■□□□ 1.89
SNX12-203ENST00000465030 HSPA1LP34931 641 aa26.83■■□□□ 1.89
SNX12-203ENST00000465030 C3P01024 1663 aa26.82■■□□□ 1.88
SNX12-203ENST00000465030 PRXQ9BXM0 1461 aa26.81■■□□□ 1.88
SNX12-203ENST00000465030 SAMD9Q5K651 1589 aa26.81■■□□□ 1.88
SNX12-203ENST00000465030 PHF23Q9BUL5 403 aaPredicted RBP26.79■■□□□ 1.88
SNX12-203ENST00000465030 CAMSAP1Q5T5Y3 1602 aa26.77■■□□□ 1.88
SNX12-203ENST00000465030 PLCH2O75038 1416 aa26.73■■□□□ 1.87
SNX12-203ENST00000465030 SCAF1Q9H7N4 1312 aaKnown RBP26.72■■□□□ 1.87
SNX12-203ENST00000465030 NCKAP5LQ9HCH0 1330 aa26.71■■□□□ 1.87
SNX12-203ENST00000465030 ESF1Q9H501 851 aaKnown RBP26.69■■□□□ 1.86
SNX12-203ENST00000465030 REREQ9P2R6 1566 aa26.68■■□□□ 1.86
SNX12-203ENST00000465030 PIP4K2BP78356 416 aa26.68■■□□□ 1.86
SNX12-203ENST00000465030 ZNF518AQ6AHZ1 1483 aa26.68■■□□□ 1.86
SNX12-203ENST00000465030 DIP2CQ9Y2E4 1556 aa26.65■■□□□ 1.86
SNX12-203ENST00000465030 KDM5CP41229 1560 aa26.64■■□□□ 1.86
SNX12-203ENST00000465030 AGLP35573 1532 aa26.64■■□□□ 1.85
SNX12-203ENST00000465030 EFCAB2Q5VUJ9 269 aa26.62■■□□□ 1.85
SNX12-203ENST00000465030 NPATQ14207 1427 aa26.62■■□□□ 1.85
SNX12-203ENST00000465030 CNTLNQ9NXG0 1405 aa26.62■■□□□ 1.85
SNX12-203ENST00000465030 TOM1O60784 492 aa26.61■■□□□ 1.85
SNX12-203ENST00000465030 PKD2Q13563 968 aa26.61■■□□□ 1.85
SNX12-203ENST00000465030 PLA2R1Q13018 1463 aa26.6■■□□□ 1.85
SNX12-203ENST00000465030 AFAP1Q8N556 730 aa26.59■■□□□ 1.85
SNX12-203ENST00000465030 TCOF1Q13428 1488 aaKnown RBP26.57■■□□□ 1.84
SNX12-203ENST00000465030 MYT1LQ9UL68 1186 aa26.57■■□□□ 1.84
SNX12-203ENST00000465030 ABCA6Q8N139 1617 aa26.55■■□□□ 1.84
SNX12-203ENST00000465030 PPP6R1Q9UPN7 881 aa26.54■■□□□ 1.84
SNX12-203ENST00000465030 MYO5CQ9NQX4 1742 aa26.51■■□□□ 1.83
SNX12-203ENST00000465030 CDK13Q14004 1512 aaKnown RBP26.5■■□□□ 1.83
SNX12-203ENST00000465030 MLH3Q9UHC1 1453 aa26.5■■□□□ 1.83
SNX12-203ENST00000465030 ZNF142P52746 1687 aaPredicted RBP26.48■■□□□ 1.83
SNX12-203ENST00000465030 CPS1P31327 1500 aa26.48■■□□□ 1.83
SNX12-203ENST00000465030 MROH2AA6NES4 1674 aa26.47■■□□□ 1.83
SNX12-203ENST00000465030 ZMYM3Q14202 1370 aa26.46■■□□□ 1.83
SNX12-203ENST00000465030 MYO3AQ8NEV4 1616 aa26.45■■□□□ 1.82
SNX12-203ENST00000465030 CEP170BQ9Y4F5 1589 aaPredicted RBP26.45■■□□□ 1.82
SNX12-203ENST00000465030 RGS17Q9UGC6 210 aaPredicted RBP26.44■■□□□ 1.82
SNX12-203ENST00000465030 RANGAP1P46060 587 aaPredicted RBP26.43■■□□□ 1.82
SNX12-203ENST00000465030 ARHGAP5Q13017 1502 aa26.43■■□□□ 1.82
SNX12-203ENST00000465030 PTPRKQ15262 1439 aa26.42■■□□□ 1.82
SNX12-203ENST00000465030 ALKQ9UM73 1620 aa26.4■■□□□ 1.82
SNX12-203ENST00000465030 SUPT6HQ7KZ85 1726 aaKnown RBP26.39■■□□□ 1.81
SNX12-203ENST00000465030 SHANK2Q9UPX8 1470 aa26.38■■□□□ 1.81
SNX12-203ENST00000465030 KIF14Q15058 1648 aa26.34■■□□□ 1.81
SNX12-203ENST00000465030 SENP3Q9H4L4 574 aaPredicted RBP26.31■■□□□ 1.8
SNX12-203ENST00000465030 KIDINS220Q9ULH0 1771 aa26.29■■□□□ 1.8
SNX12-203ENST00000465030 ABCC1P33527 1531 aa26.27■■□□□ 1.8
SNX12-203ENST00000465030 NEURL4Q96JN8 1562 aa26.27■■□□□ 1.8
SNX12-203ENST00000465030 CLTCQ00610 1675 aaKnown RBP26.25■■□□□ 1.79
SNX12-203ENST00000465030 A2ML1A8K2U0 1454 aa26.25■■□□□ 1.79
SNX12-203ENST00000465030 SRCAPQ6ZRS2 3230 aa26.25■■□□□ 1.79
SNX12-203ENST00000465030 CDK11AQ9UQ88 783 aaPredicted RBP26.25■■□□□ 1.79
SNX12-203ENST00000465030 VWDEQ8N2E2 1590 aa26.24■■□□□ 1.79
SNX12-203ENST00000465030 POTEAQ6S8J7 498 aa26.23■■□□□ 1.79
SNX12-203ENST00000465030 DNMT1P26358 1616 aaKnown RBP26.23■■□□□ 1.79
SNX12-203ENST00000465030 POLR1AO95602 1720 aaPredicted RBP26.22■■□□□ 1.79
SNX12-203ENST00000465030 TROQ12816 1431 aaPredicted RBP26.22■■□□□ 1.79
SNX12-203ENST00000465030 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
SNX12-203ENST00000465030 ITSN2Q9NZM3 1697 aa26.21■■□□□ 1.79
SNX12-203ENST00000465030 CDC42BPBQ9Y5S2 1711 aa26.19■■□□□ 1.78
SNX12-203ENST00000465030 CLIP1P30622 1438 aa26.17■■□□□ 1.78
SNX12-203ENST00000465030 ATP1B4Q9UN42 357 aaPredicted RBP26.16■■□□□ 1.78
SNX12-203ENST00000465030 PREX2Q70Z35 1606 aa26.13■■□□□ 1.77
SNX12-203ENST00000465030 RNF17Q9BXT8 1623 aaKnown RBP26.13■■□□□ 1.77
SNX12-203ENST00000465030 SAMD9LQ8IVG5 1584 aa26.12■■□□□ 1.77
SNX12-203ENST00000465030 PLXNC1O60486 1568 aa26.1■■□□□ 1.77
SNX12-203ENST00000465030 LRRC7Q96NW7 1537 aa26.09■■□□□ 1.77
SNX12-203ENST00000465030 SETD1AO15047 1707 aaKnown RBP26.09■■□□□ 1.77
SNX12-203ENST00000465030 ANKLE2Q86XL3 938 aa26.08■■□□□ 1.77
SNX12-203ENST00000465030 GGT6Q6P531 493 aa26.07■■□□□ 1.76
SNX12-203ENST00000465030 SPAG9O60271 1321 aaKnown RBP26.06■■□□□ 1.76
SNX12-203ENST00000465030 NPHP4O75161 1426 aaPredicted RBP26.05■■□□□ 1.76
SNX12-203ENST00000465030 FMN1Q68DA7 1419 aa26.05■■□□□ 1.76
SNX12-203ENST00000465030 MED14O60244 1454 aa26.05■■□□□ 1.76
SNX12-203ENST00000465030 A2MP01023 1474 aa26.04■■□□□ 1.76
SNX12-203ENST00000465030 SYNMO15061 1565 aa26.03■■□□□ 1.76
SNX12-203ENST00000465030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.03■■□□□ 1.76
SNX12-203ENST00000465030 TNRQ92752 1358 aa26.02■■□□□ 1.76
SNX12-203ENST00000465030 STRCP1A6NGW2 1772 aa26■■□□□ 1.75
SNX12-203ENST00000465030 DEPDC5O75140 1603 aa25.99■■□□□ 1.75
SNX12-203ENST00000465030 ATP7AQ04656 1500 aa25.99■■□□□ 1.75
SNX12-203ENST00000465030 SYCP2Q9BX26 1530 aa25.97■■□□□ 1.75
SNX12-203ENST00000465030 THEMISQ8N1K5 641 aaPredicted RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms