RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 MAGI2Q86UL8 1455 aa27.76■■■□□ 2.03
COPS6-205ENST00000465027 CEBPAP49715 358 aaPredicted RBP27.73■■■□□ 2.03
COPS6-205ENST00000465027 PLCH2O75038 1416 aa27.71■■■□□ 2.03
COPS6-205ENST00000465027 ARHGEF12Q9NZN5 1544 aa27.7■■■□□ 2.02
COPS6-205ENST00000465027 ATP10AO60312 1499 aa27.68■■■□□ 2.02
COPS6-205ENST00000465027 C9orf84Q5VXU9 1444 aa27.66■■■□□ 2.02
COPS6-205ENST00000465027 EEA1Q15075 1411 aa27.65■■■□□ 2.02
COPS6-205ENST00000465027 PREX1Q8TCU6 1659 aa27.64■■■□□ 2.02
COPS6-205ENST00000465027 ILDR2Q71H61 639 aa27.63■■■□□ 2.01
COPS6-205ENST00000465027 ATP1B4Q9UN42 357 aaPredicted RBP27.63■■■□□ 2.01
COPS6-205ENST00000465027 EHMT2Q96KQ7 1210 aa27.62■■■□□ 2.01
COPS6-205ENST00000465027 STRCQ7RTU9 1775 aa27.6■■■□□ 2.01
COPS6-205ENST00000465027 EFCAB2Q5VUJ9 269 aa27.59■■■□□ 2.01
COPS6-205ENST00000465027 DISP3Q9P2K9 1392 aa27.59■■■□□ 2.01
COPS6-205ENST00000465027 MYO5CQ9NQX4 1742 aa27.58■■■□□ 2.01
COPS6-205ENST00000465027 KIF14Q15058 1648 aa27.58■■■□□ 2.01
COPS6-205ENST00000465027 AFAP1Q8N556 730 aa27.56■■■□□ 2
COPS6-205ENST00000465027 UHRF1BP1Q6BDS2 1440 aa27.51■■□□□ 1.99
COPS6-205ENST00000465027 ZNF518AQ6AHZ1 1483 aa27.51■■□□□ 1.99
COPS6-205ENST00000465027 MYT1LQ9UL68 1186 aa27.5■■□□□ 1.99
COPS6-205ENST00000465027 ARHGAP5Q13017 1502 aa27.5■■□□□ 1.99
COPS6-205ENST00000465027 KDM5CP41229 1560 aa27.49■■□□□ 1.99
COPS6-205ENST00000465027 DIP2CQ9Y2E4 1556 aa27.49■■□□□ 1.99
COPS6-205ENST00000465027 DMRT2Q9Y5R5 561 aa27.47■■□□□ 1.99
COPS6-205ENST00000465027 ARHGAP35Q9NRY4 1499 aa27.45■■□□□ 1.99
COPS6-205ENST00000465027 ABCA6Q8N139 1617 aa27.45■■□□□ 1.98
COPS6-205ENST00000465027 TROQ12816 1431 aaPredicted RBP27.44■■□□□ 1.98
COPS6-205ENST00000465027 FMN1Q68DA7 1419 aa27.44■■□□□ 1.98
COPS6-205ENST00000465027 SOCS7O14512 581 aa27.43■■□□□ 1.98
COPS6-205ENST00000465027 UBTFP17480 764 aaKnown RBP27.43■■□□□ 1.98
COPS6-205ENST00000465027 CDK11AQ9UQ88 783 aaPredicted RBP27.43■■□□□ 1.98
COPS6-205ENST00000465027 C3P01024 1663 aa27.43■■□□□ 1.98
COPS6-205ENST00000465027 LRRIQ1Q96JM4 1722 aa27.4■■□□□ 1.98
COPS6-205ENST00000465027 SETD1BQ9UPS6 1966 aaKnown RBP27.4■■□□□ 1.98
COPS6-205ENST00000465027 TRAPPC8Q9Y2L5 1435 aa27.39■■□□□ 1.97
COPS6-205ENST00000465027 PTPRTO14522 1441 aa27.38■■□□□ 1.97
COPS6-205ENST00000465027 CDC42BPBQ9Y5S2 1711 aa27.38■■□□□ 1.97
COPS6-205ENST00000465027 REREQ9P2R6 1566 aa27.37■■□□□ 1.97
COPS6-205ENST00000465027 SPATA31D1Q6ZQQ2 1576 aa27.36■■□□□ 1.97
COPS6-205ENST00000465027 CLIP1P30622 1438 aa27.35■■□□□ 1.97
COPS6-205ENST00000465027 LTBP4Q8N2S1 1624 aa27.35■■□□□ 1.97
COPS6-205ENST00000465027 MLH3Q9UHC1 1453 aa27.35■■□□□ 1.97
COPS6-205ENST00000465027 ABCC1P33527 1531 aa27.31■■□□□ 1.96
COPS6-205ENST00000465027 ESF1Q9H501 851 aaKnown RBP27.31■■□□□ 1.96
COPS6-205ENST00000465027 AGLP35573 1532 aa27.31■■□□□ 1.96
COPS6-205ENST00000465027 NCOA1Q15788 1441 aa27.29■■□□□ 1.96
COPS6-205ENST00000465027 PREX2Q70Z35 1606 aa27.29■■□□□ 1.96
COPS6-205ENST00000465027 ITSN2Q9NZM3 1697 aa27.29■■□□□ 1.96
COPS6-205ENST00000465027 KIDINS220Q9ULH0 1771 aa27.27■■□□□ 1.96
COPS6-205ENST00000465027 CAMSAP1Q5T5Y3 1602 aa27.22■■□□□ 1.95
COPS6-205ENST00000465027 NCKAP5LQ9HCH0 1330 aa27.2■■□□□ 1.95
COPS6-205ENST00000465027 CNTLNQ9NXG0 1405 aa27.19■■□□□ 1.94
COPS6-205ENST00000465027 CDC42BPAQ5VT25 1732 aa27.19■■□□□ 1.94
COPS6-205ENST00000465027 ZNF777Q9ULD5 760 aaPredicted RBP27.17■■□□□ 1.94
COPS6-205ENST00000465027 IQSEC2Q5JU85 1478 aa27.17■■□□□ 1.94
COPS6-205ENST00000465027 ZNF335Q9H4Z2 1342 aaPredicted RBP27.16■■□□□ 1.94
COPS6-205ENST00000465027 SAMD9LQ8IVG5 1584 aa27.16■■□□□ 1.94
COPS6-205ENST00000465027 ZMYM3Q14202 1370 aa27.14■■□□□ 1.94
COPS6-205ENST00000465027 NPATQ14207 1427 aa27.13■■□□□ 1.93
COPS6-205ENST00000465027 CASKIN1Q8WXD9 1431 aa27.13■■□□□ 1.93
COPS6-205ENST00000465027 SUPT6HQ7KZ85 1726 aaKnown RBP27.13■■□□□ 1.93
COPS6-205ENST00000465027 SYCP2Q9BX26 1530 aa27.12■■□□□ 1.93
COPS6-205ENST00000465027 CCDC18Q5T9S5 1454 aa27.12■■□□□ 1.93
COPS6-205ENST00000465027 MROH2AA6NES4 1674 aa27.11■■□□□ 1.93
COPS6-205ENST00000465027 UBAP1LF5GYI3 381 aa27.1■■□□□ 1.93
COPS6-205ENST00000465027 HNRNPMP52272 730 aaKnown RBP eCLIP27.1■■□□□ 1.93
COPS6-205ENST00000465027 SPAG9O60271 1321 aaKnown RBP27.09■■□□□ 1.93
COPS6-205ENST00000465027 CLTCQ00610 1675 aaKnown RBP27.08■■□□□ 1.93
COPS6-205ENST00000465027 MYO3AQ8NEV4 1616 aa27.05■■□□□ 1.92
COPS6-205ENST00000465027 GPATCH8Q9UKJ3 1502 aaKnown RBP27.04■■□□□ 1.92
COPS6-205ENST00000465027 ATP7AQ04656 1500 aa27.03■■□□□ 1.92
COPS6-205ENST00000465027 PTPRKQ15262 1439 aa27.02■■□□□ 1.92
COPS6-205ENST00000465027 ZNF142P52746 1687 aaPredicted RBP27.01■■□□□ 1.92
COPS6-205ENST00000465027 GGT6Q6P531 493 aa27.01■■□□□ 1.91
COPS6-205ENST00000465027 PLXNC1O60486 1568 aa27.01■■□□□ 1.91
COPS6-205ENST00000465027 CEP170BQ9Y4F5 1589 aaPredicted RBP27.01■■□□□ 1.91
COPS6-205ENST00000465027 CHIC1Q5VXU3 224 aa27■■□□□ 1.91
COPS6-205ENST00000465027 A2MP01023 1474 aa27■■□□□ 1.91
COPS6-205ENST00000465027 INO80Q9ULG1 1556 aaPredicted RBP26.99■■□□□ 1.91
COPS6-205ENST00000465027 PLA2R1Q13018 1463 aa26.99■■□□□ 1.91
COPS6-205ENST00000465027 TCOF1Q13428 1488 aaKnown RBP26.99■■□□□ 1.91
COPS6-205ENST00000465027 PKD2Q13563 968 aa26.97■■□□□ 1.91
COPS6-205ENST00000465027 FYCO1Q9BQS8 1478 aa26.97■■□□□ 1.91
COPS6-205ENST00000465027 CFDP1Q9UEE9 299 aaPredicted RBP26.94■■□□□ 1.9
COPS6-205ENST00000465027 PPP6R1Q9UPN7 881 aa26.93■■□□□ 1.9
COPS6-205ENST00000465027 KIAA1107Q9UPP5 1409 aa26.91■■□□□ 1.9
COPS6-205ENST00000465027 CCNB3Q8WWL7 1395 aa26.89■■□□□ 1.9
COPS6-205ENST00000465027 ZNF644Q9H582 1327 aaPredicted RBP26.89■■□□□ 1.89
COPS6-205ENST00000465027 SCAF1Q9H7N4 1312 aaKnown RBP26.89■■□□□ 1.89
COPS6-205ENST00000465027 HSPA1LP34931 641 aa26.88■■□□□ 1.89
COPS6-205ENST00000465027 PLEKHH2Q8IVE3 1493 aa26.87■■□□□ 1.89
COPS6-205ENST00000465027 PIP4K2BP78356 416 aa26.87■■□□□ 1.89
COPS6-205ENST00000465027 DNMT1P26358 1616 aaKnown RBP26.87■■□□□ 1.89
COPS6-205ENST00000465027 A2ML1A8K2U0 1454 aa26.86■■□□□ 1.89
COPS6-205ENST00000465027 ADGBQ8N7X0 1667 aa26.83■■□□□ 1.89
COPS6-205ENST00000465027 FBXO31Q5XUX0 539 aaPredicted RBP26.83■■□□□ 1.89
COPS6-205ENST00000465027 MED1Q15648 1581 aaPredicted RBP26.83■■□□□ 1.89
COPS6-205ENST00000465027 NEURL4Q96JN8 1562 aa26.81■■□□□ 1.88
COPS6-205ENST00000465027 MTUS2Q5JR59 1369 aa26.79■■□□□ 1.88
COPS6-205ENST00000465027 MBD5Q9P267 1494 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms