RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.8■■□□□ 1.08
SNX17-205ENST00000464279 HNRNPUL2Q1KMD3 747 aaKnown RBP21.8■■□□□ 1.08
SNX17-205ENST00000464279 HECW1Q76N89 1606 aa21.77■■□□□ 1.08
SNX17-205ENST00000464279 UBAP1LF5GYI3 381 aa21.77■■□□□ 1.08
SNX17-205ENST00000464279 MED1Q15648 1581 aaPredicted RBP21.76■■□□□ 1.07
SNX17-205ENST00000464279 C9orf84Q5VXU9 1444 aa21.75■■□□□ 1.07
SNX17-205ENST00000464279 ATP10AO60312 1499 aa21.74■■□□□ 1.07
SNX17-205ENST00000464279 RAPGEF6Q8TEU7 1601 aa21.73■■□□□ 1.07
SNX17-205ENST00000464279 P3H3Q8IVL6 736 aa21.72■■□□□ 1.07
SNX17-205ENST00000464279 SETD1BQ9UPS6 1966 aaKnown RBP21.71■■□□□ 1.07
SNX17-205ENST00000464279 NCOA1Q15788 1441 aa21.71■■□□□ 1.07
SNX17-205ENST00000464279 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.67■■□□□ 1.06
SNX17-205ENST00000464279 NUP153P49790 1475 aaKnown RBP21.67■■□□□ 1.06
SNX17-205ENST00000464279 SCAPERQ9BY12 1400 aa21.65■■□□□ 1.06
SNX17-205ENST00000464279 PLEKHD1A6NEE1 506 aa21.64■■□□□ 1.05
SNX17-205ENST00000464279 ZNF335Q9H4Z2 1342 aaPredicted RBP21.62■■□□□ 1.05
SNX17-205ENST00000464279 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
SNX17-205ENST00000464279 TRAPPC8Q9Y2L5 1435 aa21.61■■□□□ 1.05
SNX17-205ENST00000464279 C3P01024 1663 aa21.6■■□□□ 1.05
SNX17-205ENST00000464279 HSPA1LP34931 641 aa21.59■■□□□ 1.05
SNX17-205ENST00000464279 SAMD9Q5K651 1589 aa21.59■■□□□ 1.05
SNX17-205ENST00000464279 PRXQ9BXM0 1461 aa21.58■■□□□ 1.04
SNX17-205ENST00000464279 CAMSAP1Q5T5Y3 1602 aa21.56■■□□□ 1.04
SNX17-205ENST00000464279 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
SNX17-205ENST00000464279 ESF1Q9H501 851 aaKnown RBP21.53■■□□□ 1.04
SNX17-205ENST00000464279 PLCH2O75038 1416 aa21.53■■□□□ 1.04
SNX17-205ENST00000464279 ZNF518AQ6AHZ1 1483 aa21.5■■□□□ 1.03
SNX17-205ENST00000464279 NCKAP5LQ9HCH0 1330 aa21.5■■□□□ 1.03
SNX17-205ENST00000464279 REREQ9P2R6 1566 aa21.49■■□□□ 1.03
SNX17-205ENST00000464279 PIP4K2BP78356 416 aa21.49■■□□□ 1.03
SNX17-205ENST00000464279 DIP2CQ9Y2E4 1556 aa21.47■■□□□ 1.03
SNX17-205ENST00000464279 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
SNX17-205ENST00000464279 AGLP35573 1532 aa21.45■■□□□ 1.02
SNX17-205ENST00000464279 KDM5CP41229 1560 aa21.45■■□□□ 1.02
SNX17-205ENST00000464279 NPATQ14207 1427 aa21.45■■□□□ 1.02
SNX17-205ENST00000464279 TOM1O60784 492 aa21.44■■□□□ 1.02
SNX17-205ENST00000464279 PKD2Q13563 968 aa21.44■■□□□ 1.02
SNX17-205ENST00000464279 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
SNX17-205ENST00000464279 MYT1LQ9UL68 1186 aa21.43■■□□□ 1.02
SNX17-205ENST00000464279 PLA2R1Q13018 1463 aa21.43■■□□□ 1.02
SNX17-205ENST00000464279 AFAP1Q8N556 730 aa21.4■■□□□ 1.02
SNX17-205ENST00000464279 TCOF1Q13428 1488 aaKnown RBP21.39■■□□□ 1.02
SNX17-205ENST00000464279 ABCA6Q8N139 1617 aa21.38■■□□□ 1.01
SNX17-205ENST00000464279 PPP6R1Q9UPN7 881 aa21.38■■□□□ 1.01
SNX17-205ENST00000464279 MYO5CQ9NQX4 1742 aa21.35■■□□□ 1.01
SNX17-205ENST00000464279 CDK13Q14004 1512 aaKnown RBP21.34■■□□□ 1.01
SNX17-205ENST00000464279 ZNF142P52746 1687 aaPredicted RBP21.34■■□□□ 1.01
SNX17-205ENST00000464279 MLH3Q9UHC1 1453 aa21.34■■□□□ 1.01
SNX17-205ENST00000464279 CPS1P31327 1500 aa21.34■■□□□ 1.01
SNX17-205ENST00000464279 MROH2AA6NES4 1674 aa21.32■■□□□ 1
SNX17-205ENST00000464279 MYO3AQ8NEV4 1616 aa21.31■■□□□ 1
SNX17-205ENST00000464279 CEP170BQ9Y4F5 1589 aaPredicted RBP21.31■■□□□ 1
SNX17-205ENST00000464279 ARHGAP5Q13017 1502 aa21.3■■□□□ 1
SNX17-205ENST00000464279 ZMYM3Q14202 1370 aa21.29■■□□□ 1
SNX17-205ENST00000464279 PTPRKQ15262 1439 aa21.29■■□□□ 1
SNX17-205ENST00000464279 RANGAP1P46060 587 aaPredicted RBP21.28■■□□□ 1
SNX17-205ENST00000464279 SUPT6HQ7KZ85 1726 aaKnown RBP21.27■■□□□ 1
SNX17-205ENST00000464279 SHANK2Q9UPX8 1470 aa21.25■□□□□ 0.99
SNX17-205ENST00000464279 RGS17Q9UGC6 210 aaPredicted RBP21.24■□□□□ 0.99
SNX17-205ENST00000464279 ALKQ9UM73 1620 aa21.22■□□□□ 0.99
SNX17-205ENST00000464279 KIF14Q15058 1648 aa21.21■□□□□ 0.99
SNX17-205ENST00000464279 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
SNX17-205ENST00000464279 KIDINS220Q9ULH0 1771 aa21.16■□□□□ 0.98
SNX17-205ENST00000464279 ABCC1P33527 1531 aa21.16■□□□□ 0.98
SNX17-205ENST00000464279 CDK11AQ9UQ88 783 aaPredicted RBP21.16■□□□□ 0.98
SNX17-205ENST00000464279 A2ML1A8K2U0 1454 aa21.15■□□□□ 0.98
SNX17-205ENST00000464279 CLTCQ00610 1675 aaKnown RBP21.14■□□□□ 0.97
SNX17-205ENST00000464279 NEURL4Q96JN8 1562 aa21.14■□□□□ 0.97
SNX17-205ENST00000464279 TROQ12816 1431 aaPredicted RBP21.12■□□□□ 0.97
SNX17-205ENST00000464279 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
SNX17-205ENST00000464279 CLIP1P30622 1438 aa21.12■□□□□ 0.97
SNX17-205ENST00000464279 ITSN2Q9NZM3 1697 aa21.12■□□□□ 0.97
SNX17-205ENST00000464279 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
SNX17-205ENST00000464279 VWDEQ8N2E2 1590 aa21.11■□□□□ 0.97
SNX17-205ENST00000464279 POTEAQ6S8J7 498 aa21.09■□□□□ 0.97
SNX17-205ENST00000464279 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
SNX17-205ENST00000464279 ATP1B4Q9UN42 357 aaPredicted RBP21.08■□□□□ 0.97
SNX17-205ENST00000464279 CDC42BPBQ9Y5S2 1711 aa21.08■□□□□ 0.97
SNX17-205ENST00000464279 RNF17Q9BXT8 1623 aaKnown RBP21.07■□□□□ 0.96
SNX17-205ENST00000464279 PREX2Q70Z35 1606 aa21.05■□□□□ 0.96
SNX17-205ENST00000464279 SAMD9LQ8IVG5 1584 aa21.03■□□□□ 0.96
SNX17-205ENST00000464279 PLXNC1O60486 1568 aa21.02■□□□□ 0.95
SNX17-205ENST00000464279 ANKLE2Q86XL3 938 aa21.01■□□□□ 0.95
SNX17-205ENST00000464279 FMN1Q68DA7 1419 aa21.01■□□□□ 0.95
SNX17-205ENST00000464279 LRRC7Q96NW7 1537 aa21■□□□□ 0.95
SNX17-205ENST00000464279 SETD1AO15047 1707 aaKnown RBP21■□□□□ 0.95
SNX17-205ENST00000464279 SYNMO15061 1565 aa20.99■□□□□ 0.95
SNX17-205ENST00000464279 NPHP4O75161 1426 aaPredicted RBP20.99■□□□□ 0.95
SNX17-205ENST00000464279 GGT6Q6P531 493 aa20.99■□□□□ 0.95
SNX17-205ENST00000464279 SPAG9O60271 1321 aaKnown RBP20.99■□□□□ 0.95
SNX17-205ENST00000464279 MED14O60244 1454 aa20.97■□□□□ 0.95
SNX17-205ENST00000464279 A2MP01023 1474 aa20.97■□□□□ 0.95
SNX17-205ENST00000464279 TNRQ92752 1358 aa20.97■□□□□ 0.95
SNX17-205ENST00000464279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
SNX17-205ENST00000464279 ATP7AQ04656 1500 aa20.95■□□□□ 0.94
SNX17-205ENST00000464279 DEPDC5O75140 1603 aa20.94■□□□□ 0.94
SNX17-205ENST00000464279 SYCP2Q9BX26 1530 aa20.92■□□□□ 0.94
SNX17-205ENST00000464279 THEMISQ8N1K5 641 aaPredicted RBP20.91■□□□□ 0.94
SNX17-205ENST00000464279 IQGAP1P46940 1657 aa20.9■□□□□ 0.94
SNX17-205ENST00000464279 INO80Q9ULG1 1556 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms