RNA–Protein interactions for RNA: ENST00000463493.5

RAP1B-210, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-210ENST00000463493 PREX1Q8TCU6 1659 aa28.02■■■□□ 2.08
RAP1B-210ENST00000463493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.01■■■□□ 2.078e-7■■□□□ 12.8
RAP1B-210ENST00000463493 HECW1Q76N89 1606 aa28■■■□□ 2.07
RAP1B-210ENST00000463493 CEBPAP49715 358 aaPredicted RBP27.98■■■□□ 2.07
RAP1B-210ENST00000463493 ARHGEF12Q9NZN5 1544 aa27.97■■■□□ 2.07
RAP1B-210ENST00000463493 STRCQ7RTU9 1775 aa27.96■■■□□ 2.07
RAP1B-210ENST00000463493 RANGAP1P46060 587 aaPredicted RBP27.92■■■□□ 2.06
RAP1B-210ENST00000463493 SCAPERQ9BY12 1400 aa27.92■■■□□ 2.06
RAP1B-210ENST00000463493 ATP10AO60312 1499 aa27.91■■■□□ 2.06
RAP1B-210ENST00000463493 UHRF1BP1Q6BDS2 1440 aa27.9■■■□□ 2.06
RAP1B-210ENST00000463493 C9orf84Q5VXU9 1444 aa27.89■■■□□ 2.06
RAP1B-210ENST00000463493 PTPRTO14522 1441 aa27.84■■■□□ 2.05
RAP1B-210ENST00000463493 PLCH2O75038 1416 aa27.83■■■□□ 2.05
RAP1B-210ENST00000463493 CSRNP3Q8WYN3 585 aa27.8■■■□□ 2.04
RAP1B-210ENST00000463493 SETD1BQ9UPS6 1966 aaKnown RBP27.79■■■□□ 2.04
RAP1B-210ENST00000463493 LTBP4Q8N2S1 1624 aa27.77■■■□□ 2.04
RAP1B-210ENST00000463493 CDK13Q14004 1512 aaKnown RBP27.75■■■□□ 2.03
RAP1B-210ENST00000463493 EFCAB2Q5VUJ9 269 aa27.74■■■□□ 2.03
RAP1B-210ENST00000463493 IQSEC2Q5JU85 1478 aa27.74■■■□□ 2.03
RAP1B-210ENST00000463493 MYT1LQ9UL68 1186 aa27.69■■■□□ 2.02
RAP1B-210ENST00000463493 ZNF518AQ6AHZ1 1483 aa27.69■■■□□ 2.02
RAP1B-210ENST00000463493 AFAP1Q8N556 730 aa27.67■■■□□ 2.02
RAP1B-210ENST00000463493 C3P01024 1663 aa27.67■■■□□ 2.02
RAP1B-210ENST00000463493 MYO5CQ9NQX4 1742 aa27.66■■■□□ 2.02
RAP1B-210ENST00000463493 ESF1Q9H501 851 aaKnown RBP27.64■■■□□ 2.02
RAP1B-210ENST00000463493 NCOA1Q15788 1441 aa27.64■■■□□ 2.02
RAP1B-210ENST00000463493 TRAPPC8Q9Y2L5 1435 aa27.64■■■□□ 2.02
RAP1B-210ENST00000463493 KDM5CP41229 1560 aa27.63■■■□□ 2.01
RAP1B-210ENST00000463493 DIP2CQ9Y2E4 1556 aa27.62■■■□□ 2.01
RAP1B-210ENST00000463493 UBAP1LF5GYI3 381 aa27.59■■■□□ 2.01
RAP1B-210ENST00000463493 REREQ9P2R6 1566 aa27.59■■■□□ 2.01
RAP1B-210ENST00000463493 ARHGAP5Q13017 1502 aa27.57■■■□□ 2
RAP1B-210ENST00000463493 ATP1B4Q9UN42 357 aaPredicted RBP27.57■■■□□ 2
RAP1B-210ENST00000463493 KIF14Q15058 1648 aa27.55■■■□□ 2
RAP1B-210ENST00000463493 ABCA6Q8N139 1617 aa27.55■■■□□ 2
RAP1B-210ENST00000463493 CDK11AQ9UQ88 783 aaPredicted RBP27.53■■■□□ 2
RAP1B-210ENST00000463493 AGLP35573 1532 aa27.52■■■□□ 2
RAP1B-210ENST00000463493 ZNF335Q9H4Z2 1342 aaPredicted RBP27.52■■■□□ 2
RAP1B-210ENST00000463493 CAMSAP1Q5T5Y3 1602 aa27.52■■■□□ 2
RAP1B-210ENST00000463493 MLH3Q9UHC1 1453 aa27.51■■■□□ 2
RAP1B-210ENST00000463493 CNTLNQ9NXG0 1405 aa27.5■■□□□ 1.99
RAP1B-210ENST00000463493 NCKAP5LQ9HCH0 1330 aa27.48■■□□□ 1.99
RAP1B-210ENST00000463493 EEA1Q15075 1411 aa27.47■■□□□ 1.99
RAP1B-210ENST00000463493 TROQ12816 1431 aaPredicted RBP27.45■■□□□ 1.98
RAP1B-210ENST00000463493 NPATQ14207 1427 aa27.43■■□□□ 1.98
RAP1B-210ENST00000463493 FMN1Q68DA7 1419 aa27.42■■□□□ 1.98
RAP1B-210ENST00000463493 CLIP1P30622 1438 aa27.41■■□□□ 1.98
RAP1B-210ENST00000463493 CDC42BPBQ9Y5S2 1711 aa27.38■■□□□ 1.97
RAP1B-210ENST00000463493 ZMYM3Q14202 1370 aa27.37■■□□□ 1.97
RAP1B-210ENST00000463493 ABCC1P33527 1531 aa27.37■■□□□ 1.97
RAP1B-210ENST00000463493 PKD2Q13563 968 aa27.37■■□□□ 1.97
RAP1B-210ENST00000463493 MED1Q15648 1581 aaPredicted RBP27.36■■□□□ 1.97
RAP1B-210ENST00000463493 MROH2AA6NES4 1674 aa27.36■■□□□ 1.97
RAP1B-210ENST00000463493 KIDINS220Q9ULH0 1771 aa27.35■■□□□ 1.97
RAP1B-210ENST00000463493 HSPA1LP34931 641 aa27.34■■□□□ 1.97
RAP1B-210ENST00000463493 SCAF1Q9H7N4 1312 aaKnown RBP27.34■■□□□ 1.97
RAP1B-210ENST00000463493 ITSN2Q9NZM3 1697 aa27.33■■□□□ 1.97
RAP1B-210ENST00000463493 PLA2R1Q13018 1463 aa27.33■■□□□ 1.97
RAP1B-210ENST00000463493 PREX2Q70Z35 1606 aa27.3■■□□□ 1.96
RAP1B-210ENST00000463493 TCOF1Q13428 1488 aaKnown RBP27.3■■□□□ 1.96
RAP1B-210ENST00000463493 PIP4K2BP78356 416 aa27.29■■□□□ 1.96
RAP1B-210ENST00000463493 PPP6R1Q9UPN7 881 aa27.29■■□□□ 1.96
RAP1B-210ENST00000463493 MYO3AQ8NEV4 1616 aa27.29■■□□□ 1.96
RAP1B-210ENST00000463493 ZNF142P52746 1687 aaPredicted RBP27.28■■□□□ 1.96
RAP1B-210ENST00000463493 ARHGAP35Q9NRY4 1499 aa27.28■■□□□ 1.96
RAP1B-210ENST00000463493 CEP170BQ9Y4F5 1589 aaPredicted RBP27.26■■□□□ 1.96
RAP1B-210ENST00000463493 SUPT6HQ7KZ85 1726 aaKnown RBP27.26■■□□□ 1.95
RAP1B-210ENST00000463493 EHMT2Q96KQ7 1210 aa27.24■■□□□ 1.95
RAP1B-210ENST00000463493 LRRIQ1Q96JM4 1722 aa27.24■■□□□ 1.95
RAP1B-210ENST00000463493 CLTCQ00610 1675 aaKnown RBP27.24■■□□□ 1.95
RAP1B-210ENST00000463493 UBTFP17480 764 aaKnown RBP27.23■■□□□ 1.95
RAP1B-210ENST00000463493 PTPRKQ15262 1439 aa27.23■■□□□ 1.95
RAP1B-210ENST00000463493 SAMD9LQ8IVG5 1584 aa27.22■■□□□ 1.95
RAP1B-210ENST00000463493 TOM1O60784 492 aa27.22■■□□□ 1.95
RAP1B-210ENST00000463493 PHF23Q9BUL5 403 aaPredicted RBP27.21■■□□□ 1.95
RAP1B-210ENST00000463493 SPAG9O60271 1321 aaKnown RBP27.19■■□□□ 1.94
RAP1B-210ENST00000463493 ZNF777Q9ULD5 760 aaPredicted RBP27.18■■□□□ 1.94
RAP1B-210ENST00000463493 CDC42BPAQ5VT25 1732 aa27.15■■□□□ 1.94
RAP1B-210ENST00000463493 GGT6Q6P531 493 aa27.14■■□□□ 1.94
RAP1B-210ENST00000463493 CPS1P31327 1500 aa27.14■■□□□ 1.94
RAP1B-210ENST00000463493 SYCP2Q9BX26 1530 aa27.12■■□□□ 1.93
RAP1B-210ENST00000463493 PLXNC1O60486 1568 aa27.11■■□□□ 1.93
RAP1B-210ENST00000463493 HNRNPMP52272 730 aaKnown RBP eCLIP27.11■■□□□ 1.93
RAP1B-210ENST00000463493 A2ML1A8K2U0 1454 aa27.11■■□□□ 1.93
RAP1B-210ENST00000463493 A2MP01023 1474 aa27.1■■□□□ 1.93
RAP1B-210ENST00000463493 SHANK2Q9UPX8 1470 aa27.1■■□□□ 1.93
RAP1B-210ENST00000463493 ATP7AQ04656 1500 aa27.1■■□□□ 1.93
RAP1B-210ENST00000463493 CCDC18Q5T9S5 1454 aa27.09■■□□□ 1.93
RAP1B-210ENST00000463493 DNMT1P26358 1616 aaKnown RBP27.08■■□□□ 1.93
RAP1B-210ENST00000463493 NEURL4Q96JN8 1562 aa27.04■■□□□ 1.92
RAP1B-210ENST00000463493 INO80Q9ULG1 1556 aaPredicted RBP27.04■■□□□ 1.92
RAP1B-210ENST00000463493 POLR1AO95602 1720 aaPredicted RBP27.03■■□□□ 1.92
RAP1B-210ENST00000463493 CASKIN1Q8WXD9 1431 aa27.03■■□□□ 1.92
RAP1B-210ENST00000463493 GPATCH8Q9UKJ3 1502 aaKnown RBP27.01■■□□□ 1.91
RAP1B-210ENST00000463493 SENP3Q9H4L4 574 aaPredicted RBP27■■□□□ 1.91
RAP1B-210ENST00000463493 KIAA1107Q9UPP5 1409 aa26.99■■□□□ 1.91
RAP1B-210ENST00000463493 ALKQ9UM73 1620 aa26.98■■□□□ 1.91
RAP1B-210ENST00000463493 VWDEQ8N2E2 1590 aa26.97■■□□□ 1.91
RAP1B-210ENST00000463493 PLEKHH2Q8IVE3 1493 aa26.96■■□□□ 1.91
RAP1B-210ENST00000463493 TNRQ92752 1358 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms