RNA–Protein interactions for RNA: ENST00000462224.5

PCP4-202, Transcript of Purkinje cell protein 4, humanhuman

TSL 2

Gene PCP4, Length 683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4-202ENST00000462224 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
PCP4-202ENST00000462224 ZFYVE16Q7Z3T8 1539 aa12.62□□□□□ -0.39
PCP4-202ENST00000462224 DISP3Q9P2K9 1392 aa12.61□□□□□ -0.39
PCP4-202ENST00000462224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCP4-202ENST00000462224 SCAPERQ9BY12 1400 aa12.6□□□□□ -0.39
PCP4-202ENST00000462224 TTC37Q6PGP7 1564 aa12.6□□□□□ -0.39
PCP4-202ENST00000462224 ATP10AO60312 1499 aa12.59□□□□□ -0.39
PCP4-202ENST00000462224 PLCH2O75038 1416 aa12.59□□□□□ -0.39
PCP4-202ENST00000462224 SETD1BQ9UPS6 1966 aaKnown RBP12.59□□□□□ -0.39
PCP4-202ENST00000462224 EFCAB2Q5VUJ9 269 aa12.58□□□□□ -0.4
PCP4-202ENST00000462224 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
PCP4-202ENST00000462224 FER1L4A9Z1Z3 1794 aa12.58□□□□□ -0.4
PCP4-202ENST00000462224 HECW1Q76N89 1606 aa12.58□□□□□ -0.4
PCP4-202ENST00000462224 ARHGEF12Q9NZN5 1544 aa12.57□□□□□ -0.4
PCP4-202ENST00000462224 C9orf84Q5VXU9 1444 aa12.56□□□□□ -0.4
PCP4-202ENST00000462224 RANGAP1P46060 587 aaPredicted RBP12.56□□□□□ -0.4
PCP4-202ENST00000462224 CDK11AQ9UQ88 783 aaPredicted RBP12.56□□□□□ -0.4
PCP4-202ENST00000462224 PREX1Q8TCU6 1659 aa12.56□□□□□ -0.4
PCP4-202ENST00000462224 EEA1Q15075 1411 aa12.55□□□□□ -0.4
PCP4-202ENST00000462224 CEBPAP49715 358 aaPredicted RBP12.55□□□□□ -0.4
PCP4-202ENST00000462224 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
PCP4-202ENST00000462224 SIGLEC1Q9BZZ2 1709 aa12.54□□□□□ -0.4
PCP4-202ENST00000462224 PTPRTO14522 1441 aa12.54□□□□□ -0.4
PCP4-202ENST00000462224 STRCQ7RTU9 1775 aa12.51□□□□□ -0.41
PCP4-202ENST00000462224 ESF1Q9H501 851 aaKnown RBP12.51□□□□□ -0.41
PCP4-202ENST00000462224 ZNF518AQ6AHZ1 1483 aa12.51□□□□□ -0.41
PCP4-202ENST00000462224 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
PCP4-202ENST00000462224 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
PCP4-202ENST00000462224 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
PCP4-202ENST00000462224 ATP1B4Q9UN42 357 aaPredicted RBP12.47□□□□□ -0.41
PCP4-202ENST00000462224 CDK13Q14004 1512 aaKnown RBP12.47□□□□□ -0.41
PCP4-202ENST00000462224 FMN1Q68DA7 1419 aa12.46□□□□□ -0.41
PCP4-202ENST00000462224 TRAPPC8Q9Y2L5 1435 aa12.46□□□□□ -0.41
PCP4-202ENST00000462224 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
PCP4-202ENST00000462224 REREQ9P2R6 1566 aa12.45□□□□□ -0.42
PCP4-202ENST00000462224 KDM5CP41229 1560 aa12.44□□□□□ -0.42
PCP4-202ENST00000462224 MLH3Q9UHC1 1453 aa12.44□□□□□ -0.42
PCP4-202ENST00000462224 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
PCP4-202ENST00000462224 CLIP1P30622 1438 aa12.43□□□□□ -0.42
PCP4-202ENST00000462224 CNTLNQ9NXG0 1405 aa12.43□□□□□ -0.42
PCP4-202ENST00000462224 AGLP35573 1532 aa12.42□□□□□ -0.42
PCP4-202ENST00000462224 LTBP4Q8N2S1 1624 aa12.42□□□□□ -0.42
PCP4-202ENST00000462224 TROQ12816 1431 aaPredicted RBP12.42□□□□□ -0.42
PCP4-202ENST00000462224 ARHGAP5Q13017 1502 aa12.42□□□□□ -0.42
PCP4-202ENST00000462224 C3P01024 1663 aa12.41□□□□□ -0.42
PCP4-202ENST00000462224 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
PCP4-202ENST00000462224 KIF14Q15058 1648 aa12.4□□□□□ -0.42
PCP4-202ENST00000462224 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
PCP4-202ENST00000462224 UBTFP17480 764 aaKnown RBP12.39□□□□□ -0.43
PCP4-202ENST00000462224 NPATQ14207 1427 aa12.38□□□□□ -0.43
PCP4-202ENST00000462224 PKD2Q13563 968 aa12.38□□□□□ -0.43
PCP4-202ENST00000462224 ZMYM3Q14202 1370 aa12.36□□□□□ -0.43
PCP4-202ENST00000462224 UBAP1LF5GYI3 381 aa12.36□□□□□ -0.43
PCP4-202ENST00000462224 CDC42BPBQ9Y5S2 1711 aa12.34□□□□□ -0.43
PCP4-202ENST00000462224 CAMSAP1Q5T5Y3 1602 aa12.34□□□□□ -0.43
PCP4-202ENST00000462224 ABCA6Q8N139 1617 aa12.34□□□□□ -0.43
PCP4-202ENST00000462224 PPP6R1Q9UPN7 881 aa12.34□□□□□ -0.43
PCP4-202ENST00000462224 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
PCP4-202ENST00000462224 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
PCP4-202ENST00000462224 MROH2AA6NES4 1674 aa12.32□□□□□ -0.44
PCP4-202ENST00000462224 PLA2R1Q13018 1463 aa12.32□□□□□ -0.44
PCP4-202ENST00000462224 ZNF335Q9H4Z2 1342 aaPredicted RBP12.32□□□□□ -0.44
PCP4-202ENST00000462224 ABCC1P33527 1531 aa12.32□□□□□ -0.44
PCP4-202ENST00000462224 KIDINS220Q9ULH0 1771 aa12.31□□□□□ -0.44
PCP4-202ENST00000462224 PREX2Q70Z35 1606 aa12.3□□□□□ -0.44
PCP4-202ENST00000462224 SPAG9O60271 1321 aaKnown RBP12.3□□□□□ -0.44
PCP4-202ENST00000462224 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
PCP4-202ENST00000462224 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
PCP4-202ENST00000462224 TOM1O60784 492 aa12.29□□□□□ -0.44
PCP4-202ENST00000462224 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
PCP4-202ENST00000462224 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.45
PCP4-202ENST00000462224 SAMD9LQ8IVG5 1584 aa12.26□□□□□ -0.45
PCP4-202ENST00000462224 HNRNPMP52272 730 aaKnown RBP eCLIP12.26□□□□□ -0.45
PCP4-202ENST00000462224 GGT6Q6P531 493 aa12.26□□□□□ -0.45
PCP4-202ENST00000462224 CASKIN1Q8WXD9 1431 aa12.26□□□□□ -0.45
PCP4-202ENST00000462224 EHMT2Q96KQ7 1210 aa12.25□□□□□ -0.45
PCP4-202ENST00000462224 PTPRKQ15262 1439 aa12.25□□□□□ -0.45
PCP4-202ENST00000462224 KIAA1107Q9UPP5 1409 aa12.25□□□□□ -0.45
PCP4-202ENST00000462224 ZNF142P52746 1687 aaPredicted RBP12.24□□□□□ -0.45
PCP4-202ENST00000462224 PLEKHH2Q8IVE3 1493 aa12.24□□□□□ -0.45
PCP4-202ENST00000462224 LRRIQ1Q96JM4 1722 aa12.24□□□□□ -0.45
PCP4-202ENST00000462224 CDC42BPAQ5VT25 1732 aa12.23□□□□□ -0.45
PCP4-202ENST00000462224 SUPT6HQ7KZ85 1726 aaKnown RBP12.23□□□□□ -0.45
PCP4-202ENST00000462224 CEP170BQ9Y4F5 1589 aaPredicted RBP12.23□□□□□ -0.45
PCP4-202ENST00000462224 A2MP01023 1474 aa12.23□□□□□ -0.45
PCP4-202ENST00000462224 CFDP1Q9UEE9 299 aaPredicted RBP12.23□□□□□ -0.45
PCP4-202ENST00000462224 HSPA1LP34931 641 aa12.22□□□□□ -0.45
PCP4-202ENST00000462224 CLTCQ00610 1675 aaKnown RBP12.22□□□□□ -0.45
PCP4-202ENST00000462224 GPATCH8Q9UKJ3 1502 aaKnown RBP12.21□□□□□ -0.45
PCP4-202ENST00000462224 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.45
PCP4-202ENST00000462224 PIP4K2BP78356 416 aa12.21□□□□□ -0.45
PCP4-202ENST00000462224 MYO3AQ8NEV4 1616 aa12.21□□□□□ -0.46
PCP4-202ENST00000462224 CPS1P31327 1500 aa12.21□□□□□ -0.46
PCP4-202ENST00000462224 ATP7AQ04656 1500 aa12.21□□□□□ -0.46
PCP4-202ENST00000462224 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.46
PCP4-202ENST00000462224 PLXNC1O60486 1568 aa12.19□□□□□ -0.46
PCP4-202ENST00000462224 ANKLE2Q86XL3 938 aa12.19□□□□□ -0.46
PCP4-202ENST00000462224 THEMISQ8N1K5 641 aaPredicted RBP12.19□□□□□ -0.46
PCP4-202ENST00000462224 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
PCP4-202ENST00000462224 SHANK2Q9UPX8 1470 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms