RNA–Protein interactions for RNA: ENST00000460675.5

COMMD6-206, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-206ENST00000460675 MAGI2Q86UL8 1455 aa17.56■□□□□ 0.4
COMMD6-206ENST00000460675 EEA1Q15075 1411 aa17.56■□□□□ 0.4
COMMD6-206ENST00000460675 SCAPERQ9BY12 1400 aa17.56■□□□□ 0.4
COMMD6-206ENST00000460675 SIGLEC1Q9BZZ2 1709 aa17.56■□□□□ 0.4
COMMD6-206ENST00000460675 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
COMMD6-206ENST00000460675 HECW1Q76N89 1606 aa17.55■□□□□ 0.4
COMMD6-206ENST00000460675 CDK13Q14004 1512 aaKnown RBP17.53■□□□□ 0.4
COMMD6-206ENST00000460675 PLCH2O75038 1416 aa17.53■□□□□ 0.4
COMMD6-206ENST00000460675 FER1L4A9Z1Z3 1794 aa17.53■□□□□ 0.4
COMMD6-206ENST00000460675 CEBPAP49715 358 aaPredicted RBP17.51■□□□□ 0.39
COMMD6-206ENST00000460675 EFCAB2Q5VUJ9 269 aa17.51■□□□□ 0.39
COMMD6-206ENST00000460675 ATP10AO60312 1499 aa17.5■□□□□ 0.39
COMMD6-206ENST00000460675 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
COMMD6-206ENST00000460675 MYT1LQ9UL68 1186 aa17.49■□□□□ 0.39
COMMD6-206ENST00000460675 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
COMMD6-206ENST00000460675 CDK11AQ9UQ88 783 aaPredicted RBP17.47■□□□□ 0.39
COMMD6-206ENST00000460675 ARHGEF12Q9NZN5 1544 aa17.46■□□□□ 0.39
COMMD6-206ENST00000460675 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
COMMD6-206ENST00000460675 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
COMMD6-206ENST00000460675 PREX1Q8TCU6 1659 aa17.44■□□□□ 0.38
COMMD6-206ENST00000460675 MYO5CQ9NQX4 1742 aa17.44■□□□□ 0.38
COMMD6-206ENST00000460675 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
COMMD6-206ENST00000460675 FMN1Q68DA7 1419 aa17.41■□□□□ 0.38
COMMD6-206ENST00000460675 ZNF518AQ6AHZ1 1483 aa17.41■□□□□ 0.38
COMMD6-206ENST00000460675 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
COMMD6-206ENST00000460675 UHRF1BP1Q6BDS2 1440 aa17.39■□□□□ 0.38
COMMD6-206ENST00000460675 ARHGAP5Q13017 1502 aa17.39■□□□□ 0.37
COMMD6-206ENST00000460675 ESF1Q9H501 851 aaKnown RBP17.38■□□□□ 0.37
COMMD6-206ENST00000460675 KIF14Q15058 1648 aa17.38■□□□□ 0.37
COMMD6-206ENST00000460675 STRCQ7RTU9 1775 aa17.37■□□□□ 0.37
COMMD6-206ENST00000460675 SETD1BQ9UPS6 1966 aaKnown RBP17.36■□□□□ 0.37
COMMD6-206ENST00000460675 CLIP1P30622 1438 aa17.36■□□□□ 0.37
COMMD6-206ENST00000460675 TROQ12816 1431 aaPredicted RBP17.36■□□□□ 0.37
COMMD6-206ENST00000460675 ILDR2Q71H61 639 aa17.35■□□□□ 0.37
COMMD6-206ENST00000460675 ARHGAP35Q9NRY4 1499 aa17.35■□□□□ 0.37
COMMD6-206ENST00000460675 KDM5CP41229 1560 aa17.34■□□□□ 0.37
COMMD6-206ENST00000460675 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
COMMD6-206ENST00000460675 MLH3Q9UHC1 1453 aa17.3■□□□□ 0.36
COMMD6-206ENST00000460675 PTPRTO14522 1441 aa17.3■□□□□ 0.36
COMMD6-206ENST00000460675 SOCS7O14512 581 aa17.29■□□□□ 0.36
COMMD6-206ENST00000460675 C3P01024 1663 aa17.29■□□□□ 0.36
COMMD6-206ENST00000460675 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
COMMD6-206ENST00000460675 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
COMMD6-206ENST00000460675 CDC42BPBQ9Y5S2 1711 aa17.28■□□□□ 0.36
COMMD6-206ENST00000460675 TRAPPC8Q9Y2L5 1435 aa17.28■□□□□ 0.36
COMMD6-206ENST00000460675 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
COMMD6-206ENST00000460675 AGLP35573 1532 aa17.25■□□□□ 0.35
COMMD6-206ENST00000460675 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
COMMD6-206ENST00000460675 ABCC1P33527 1531 aa17.23■□□□□ 0.35
COMMD6-206ENST00000460675 PREX2Q70Z35 1606 aa17.23■□□□□ 0.35
COMMD6-206ENST00000460675 CNTLNQ9NXG0 1405 aa17.22■□□□□ 0.35
COMMD6-206ENST00000460675 ITSN2Q9NZM3 1697 aa17.22■□□□□ 0.35
COMMD6-206ENST00000460675 LTBP4Q8N2S1 1624 aa17.21■□□□□ 0.35
COMMD6-206ENST00000460675 NCOA1Q15788 1441 aa17.21■□□□□ 0.34
COMMD6-206ENST00000460675 KIDINS220Q9ULH0 1771 aa17.2■□□□□ 0.34
COMMD6-206ENST00000460675 SPATA31D1Q6ZQQ2 1576 aa17.19■□□□□ 0.34
COMMD6-206ENST00000460675 CCDC18Q5T9S5 1454 aa17.18■□□□□ 0.34
COMMD6-206ENST00000460675 MSH5O43196 834 aa17.18■□□□□ 0.34
COMMD6-206ENST00000460675 CASKIN1Q8WXD9 1431 aa17.18■□□□□ 0.34
COMMD6-206ENST00000460675 NCKAP5LQ9HCH0 1330 aa17.18■□□□□ 0.34
COMMD6-206ENST00000460675 ZMYM3Q14202 1370 aa17.17■□□□□ 0.34
COMMD6-206ENST00000460675 CAMSAP1Q5T5Y3 1602 aa17.17■□□□□ 0.34
COMMD6-206ENST00000460675 IQSEC2Q5JU85 1478 aa17.17■□□□□ 0.34
COMMD6-206ENST00000460675 SPAG9O60271 1321 aaKnown RBP17.17■□□□□ 0.34
COMMD6-206ENST00000460675 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
COMMD6-206ENST00000460675 HNRNPMP52272 730 aaKnown RBP eCLIP17.16■□□□□ 0.34
COMMD6-206ENST00000460675 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
COMMD6-206ENST00000460675 NPATQ14207 1427 aa17.15■□□□□ 0.34
COMMD6-206ENST00000460675 UBAP1LF5GYI3 381 aa17.14■□□□□ 0.33
COMMD6-206ENST00000460675 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
COMMD6-206ENST00000460675 SUPT6HQ7KZ85 1726 aaKnown RBP17.13■□□□□ 0.33
COMMD6-206ENST00000460675 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
COMMD6-206ENST00000460675 GGT6Q6P531 493 aa17.12■□□□□ 0.33
COMMD6-206ENST00000460675 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
COMMD6-206ENST00000460675 PKD2Q13563 968 aa17.1■□□□□ 0.33
COMMD6-206ENST00000460675 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
COMMD6-206ENST00000460675 GPATCH8Q9UKJ3 1502 aaKnown RBP17.1■□□□□ 0.33
COMMD6-206ENST00000460675 CLTCQ00610 1675 aaKnown RBP17.09■□□□□ 0.33
COMMD6-206ENST00000460675 ATP7AQ04656 1500 aa17.08■□□□□ 0.32
COMMD6-206ENST00000460675 A2MP01023 1474 aa17.07■□□□□ 0.32
COMMD6-206ENST00000460675 FYCO1Q9BQS8 1478 aa17.07■□□□□ 0.32
COMMD6-206ENST00000460675 PTPRKQ15262 1439 aa17.05■□□□□ 0.32
COMMD6-206ENST00000460675 KIAA1107Q9UPP5 1409 aa17.05■□□□□ 0.32
COMMD6-206ENST00000460675 CCNB3Q8WWL7 1395 aa17.05■□□□□ 0.32
COMMD6-206ENST00000460675 PPP6R1Q9UPN7 881 aa17.05■□□□□ 0.32
COMMD6-206ENST00000460675 MYO3AQ8NEV4 1616 aa17.05■□□□□ 0.32
COMMD6-206ENST00000460675 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
COMMD6-206ENST00000460675 PLEKHH2Q8IVE3 1493 aa17.05■□□□□ 0.32
COMMD6-206ENST00000460675 CEP170BQ9Y4F5 1589 aaPredicted RBP17.04■□□□□ 0.32
COMMD6-206ENST00000460675 ZNF142P52746 1687 aaPredicted RBP17.03■□□□□ 0.32
COMMD6-206ENST00000460675 PLXNC1O60486 1568 aa17.02■□□□□ 0.32
COMMD6-206ENST00000460675 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.32
COMMD6-206ENST00000460675 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.32
COMMD6-206ENST00000460675 INO80Q9ULG1 1556 aaPredicted RBP17.02■□□□□ 0.31
COMMD6-206ENST00000460675 MTUS2Q5JR59 1369 aa17.01■□□□□ 0.31
COMMD6-206ENST00000460675 ZNF644Q9H582 1327 aaPredicted RBP16.99■□□□□ 0.31
COMMD6-206ENST00000460675 PIP4K2BP78356 416 aa16.99■□□□□ 0.31
COMMD6-206ENST00000460675 ADGBQ8N7X0 1667 aa16.97■□□□□ 0.31
COMMD6-206ENST00000460675 A2ML1A8K2U0 1454 aa16.97■□□□□ 0.31
COMMD6-206ENST00000460675 HSPA1LP34931 641 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms