RNA–Protein interactions for RNA: ENST00000460387.6

GCSAM-202, Transcript of germinal center associated signaling and motility, humanhuman

TSL 3 BASIC

Gene GCSAM, Length 623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSAM-202ENST00000460387 ARID3CA6NKF2 412 aa14.13□□□□□ -0.15
GCSAM-202ENST00000460387 RIMS1Q86UR5 1692 aaKnown RBP14.11□□□□□ -0.15
GCSAM-202ENST00000460387 ABCA9Q8IUA7 1624 aa14.09□□□□□ -0.15
GCSAM-202ENST00000460387 CTTNBP2Q8WZ74 1663 aa14.09□□□□□ -0.15
GCSAM-202ENST00000460387 FANCAO15360 1455 aa14.08□□□□□ -0.16
GCSAM-202ENST00000460387 RBM42Q9BTD8 480 aaKnown RBP14.07□□□□□ -0.16
GCSAM-202ENST00000460387 AKNAQ7Z591 1439 aa14.07□□□□□ -0.16
GCSAM-202ENST00000460387 ATP10BO94823 1461 aa14.06□□□□□ -0.16
GCSAM-202ENST00000460387 DENND4BO75064 1496 aaPredicted RBP14.06□□□□□ -0.16
GCSAM-202ENST00000460387 MLECQ14165 292 aa14.05□□□□□ -0.16
GCSAM-202ENST00000460387 SPATA31D1Q6ZQQ2 1576 aa14.04□□□□□ -0.16
GCSAM-202ENST00000460387 P3H3Q8IVL6 736 aa14.03□□□□□ -0.16
GCSAM-202ENST00000460387 ARHGEF40Q8TER5 1519 aa14.02□□□□□ -0.16
GCSAM-202ENST00000460387 YEATS2Q9ULM3 1422 aa14.02□□□□□ -0.16
GCSAM-202ENST00000460387 PLEKHD1A6NEE1 506 aa14.01□□□□□ -0.17
GCSAM-202ENST00000460387 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
GCSAM-202ENST00000460387 FRMPD1Q5SYB0 1578 aa14□□□□□ -0.17
GCSAM-202ENST00000460387 EFCAB5A4FU69 1503 aa13.99□□□□□ -0.17
GCSAM-202ENST00000460387 FHOD3Q2V2M9 1422 aa13.98□□□□□ -0.17
GCSAM-202ENST00000460387 CFAP74Q9C0B2 1584 aa13.97□□□□□ -0.17
GCSAM-202ENST00000460387 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
GCSAM-202ENST00000460387 MAGI2Q86UL8 1455 aa13.97□□□□□ -0.17
GCSAM-202ENST00000460387 ZFYVE16Q7Z3T8 1539 aa13.96□□□□□ -0.17
GCSAM-202ENST00000460387 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.18
GCSAM-202ENST00000460387 PREX1Q8TCU6 1659 aa13.95□□□□□ -0.18
GCSAM-202ENST00000460387 UHRF1BP1Q6BDS2 1440 aa13.95□□□□□ -0.18
GCSAM-202ENST00000460387 RICTORQ6R327 1708 aa13.95□□□□□ -0.18
GCSAM-202ENST00000460387 TTC37Q6PGP7 1564 aa13.94□□□□□ -0.18
GCSAM-202ENST00000460387 ESF1Q9H501 851 aaKnown RBP13.93□□□□□ -0.18
GCSAM-202ENST00000460387 RAPGEF6Q8TEU7 1601 aa13.93□□□□□ -0.18
GCSAM-202ENST00000460387 ZMYM4Q5VZL5 1548 aa13.91□□□□□ -0.18
GCSAM-202ENST00000460387 CEBPAP49715 358 aaPredicted RBP13.91□□□□□ -0.18
GCSAM-202ENST00000460387 MYT1LQ9UL68 1186 aa13.9□□□□□ -0.18
GCSAM-202ENST00000460387 SETD1BQ9UPS6 1966 aaKnown RBP13.9□□□□□ -0.18
GCSAM-202ENST00000460387 PTPRTO14522 1441 aa13.9□□□□□ -0.19
GCSAM-202ENST00000460387 ATP10AO60312 1499 aa13.88□□□□□ -0.19
GCSAM-202ENST00000460387 IQSEC2Q5JU85 1478 aa13.88□□□□□ -0.19
GCSAM-202ENST00000460387 PRXQ9BXM0 1461 aa13.88□□□□□ -0.19
GCSAM-202ENST00000460387 APLP2Q06481 763 aa13.87□□□□□ -0.19
GCSAM-202ENST00000460387 C9orf84Q5VXU9 1444 aa13.87□□□□□ -0.19
GCSAM-202ENST00000460387 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
GCSAM-202ENST00000460387 STRCQ7RTU9 1775 aa13.86□□□□□ -0.19
GCSAM-202ENST00000460387 ARHGEF12Q9NZN5 1544 aa13.86□□□□□ -0.19
GCSAM-202ENST00000460387 HECW1Q76N89 1606 aa13.86□□□□□ -0.19
GCSAM-202ENST00000460387 NUP153P49790 1475 aaKnown RBP13.85□□□□□ -0.19
GCSAM-202ENST00000460387 EFCAB2Q5VUJ9 269 aa13.84□□□□□ -0.19
GCSAM-202ENST00000460387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.84□□□□□ -0.19
GCSAM-202ENST00000460387 UBAP1LF5GYI3 381 aa13.83□□□□□ -0.2
GCSAM-202ENST00000460387 RANGAP1P46060 587 aaPredicted RBP13.83□□□□□ -0.2
GCSAM-202ENST00000460387 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
GCSAM-202ENST00000460387 SIGLEC1Q9BZZ2 1709 aa13.81□□□□□ -0.2
GCSAM-202ENST00000460387 PLCH2O75038 1416 aa13.8□□□□□ -0.2
GCSAM-202ENST00000460387 LTBP4Q8N2S1 1624 aa13.79□□□□□ -0.2
GCSAM-202ENST00000460387 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
GCSAM-202ENST00000460387 TRAPPC8Q9Y2L5 1435 aa13.78□□□□□ -0.2
GCSAM-202ENST00000460387 ZNF518AQ6AHZ1 1483 aa13.77□□□□□ -0.21
GCSAM-202ENST00000460387 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
GCSAM-202ENST00000460387 ATP1B4Q9UN42 357 aaPredicted RBP13.75□□□□□ -0.21
GCSAM-202ENST00000460387 NCOA1Q15788 1441 aa13.73□□□□□ -0.21
GCSAM-202ENST00000460387 KCNA4P22459 653 aa13.73□□□□□ -0.21
GCSAM-202ENST00000460387 AFAP1Q8N556 730 aa13.73□□□□□ -0.21
GCSAM-202ENST00000460387 CNTLNQ9NXG0 1405 aa13.73□□□□□ -0.21
GCSAM-202ENST00000460387 TOM1O60784 492 aa13.71□□□□□ -0.21
GCSAM-202ENST00000460387 C3P01024 1663 aa13.71□□□□□ -0.21
GCSAM-202ENST00000460387 ZNF335Q9H4Z2 1342 aaPredicted RBP13.7□□□□□ -0.22
GCSAM-202ENST00000460387 PKD2Q13563 968 aa13.7□□□□□ -0.22
GCSAM-202ENST00000460387 MYO5CQ9NQX4 1742 aa13.7□□□□□ -0.22
GCSAM-202ENST00000460387 NCKAP5LQ9HCH0 1330 aa13.69□□□□□ -0.22
GCSAM-202ENST00000460387 CAMSAP1Q5T5Y3 1602 aa13.68□□□□□ -0.22
GCSAM-202ENST00000460387 HAX1O00165 279 aa13.68□□□□□ -0.22
GCSAM-202ENST00000460387 PIP4K2BP78356 416 aa13.68□□□□□ -0.22
GCSAM-202ENST00000460387 AGLP35573 1532 aa13.68□□□□□ -0.22
GCSAM-202ENST00000460387 ARHGAP5Q13017 1502 aa13.68□□□□□ -0.22
GCSAM-202ENST00000460387 REREQ9P2R6 1566 aa13.67□□□□□ -0.22
GCSAM-202ENST00000460387 NPATQ14207 1427 aa13.66□□□□□ -0.22
GCSAM-202ENST00000460387 CDK13Q14004 1512 aaKnown RBP13.66□□□□□ -0.22
GCSAM-202ENST00000460387 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
GCSAM-202ENST00000460387 KDM5CP41229 1560 aa13.66□□□□□ -0.22
GCSAM-202ENST00000460387 CLIP1P30622 1438 aa13.65□□□□□ -0.22
GCSAM-202ENST00000460387 HSPA1LP34931 641 aa13.65□□□□□ -0.22
GCSAM-202ENST00000460387 MLH3Q9UHC1 1453 aa13.65□□□□□ -0.22
GCSAM-202ENST00000460387 DIP2CQ9Y2E4 1556 aa13.65□□□□□ -0.22
GCSAM-202ENST00000460387 MED1Q15648 1581 aaPredicted RBP13.64□□□□□ -0.23
GCSAM-202ENST00000460387 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
GCSAM-202ENST00000460387 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
GCSAM-202ENST00000460387 KIF14Q15058 1648 aa13.62□□□□□ -0.23
GCSAM-202ENST00000460387 PLA2R1Q13018 1463 aa13.61□□□□□ -0.23
GCSAM-202ENST00000460387 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
GCSAM-202ENST00000460387 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
GCSAM-202ENST00000460387 EEA1Q15075 1411 aa13.59□□□□□ -0.23
GCSAM-202ENST00000460387 ABCA6Q8N139 1617 aa13.59□□□□□ -0.23
GCSAM-202ENST00000460387 TROQ12816 1431 aaPredicted RBP13.58□□□□□ -0.24
GCSAM-202ENST00000460387 MROH2AA6NES4 1674 aa13.58□□□□□ -0.24
GCSAM-202ENST00000460387 PTPRKQ15262 1439 aa13.56□□□□□ -0.24
GCSAM-202ENST00000460387 CPS1P31327 1500 aa13.55□□□□□ -0.24
GCSAM-202ENST00000460387 TCOF1Q13428 1488 aaKnown RBP13.55□□□□□ -0.24
GCSAM-202ENST00000460387 GGT6Q6P531 493 aa13.54□□□□□ -0.24
GCSAM-202ENST00000460387 CEP170BQ9Y4F5 1589 aaPredicted RBP13.54□□□□□ -0.24
GCSAM-202ENST00000460387 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
GCSAM-202ENST00000460387 SPAG9O60271 1321 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms