RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-208ENST00000460125 ARHGEF12Q9NZN5 1544 aa18.64■□□□□ 0.57
NUCB1-208ENST00000460125 CEBPAP49715 358 aaPredicted RBP18.63■□□□□ 0.57
NUCB1-208ENST00000460125 SPATA31D1Q6ZQQ2 1576 aa18.63■□□□□ 0.57
NUCB1-208ENST00000460125 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
NUCB1-208ENST00000460125 PREX1Q8TCU6 1659 aa18.62■□□□□ 0.57
NUCB1-208ENST00000460125 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
NUCB1-208ENST00000460125 ATP10AO60312 1499 aa18.6■□□□□ 0.57
NUCB1-208ENST00000460125 SCAPERQ9BY12 1400 aa18.59■□□□□ 0.57
NUCB1-208ENST00000460125 PTPRTO14522 1441 aa18.57■□□□□ 0.56
NUCB1-208ENST00000460125 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
NUCB1-208ENST00000460125 UHRF1BP1Q6BDS2 1440 aa18.57■□□□□ 0.56
NUCB1-208ENST00000460125 PLCH2O75038 1416 aa18.55■□□□□ 0.56
NUCB1-208ENST00000460125 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
NUCB1-208ENST00000460125 RANGAP1P46060 587 aaPredicted RBP18.52■□□□□ 0.56
NUCB1-208ENST00000460125 LTBP4Q8N2S1 1624 aa18.51■□□□□ 0.55
NUCB1-208ENST00000460125 SETD1BQ9UPS6 1966 aaKnown RBP18.5■□□□□ 0.55
NUCB1-208ENST00000460125 IQSEC2Q5JU85 1478 aa18.5■□□□□ 0.55
NUCB1-208ENST00000460125 EFCAB2Q5VUJ9 269 aa18.49■□□□□ 0.55
NUCB1-208ENST00000460125 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
NUCB1-208ENST00000460125 AFAP1Q8N556 730 aa18.43■□□□□ 0.54
NUCB1-208ENST00000460125 ZNF518AQ6AHZ1 1483 aa18.43■□□□□ 0.54
NUCB1-208ENST00000460125 TRAPPC8Q9Y2L5 1435 aa18.41■□□□□ 0.54
NUCB1-208ENST00000460125 NCOA1Q15788 1441 aa18.4■□□□□ 0.54
NUCB1-208ENST00000460125 C3P01024 1663 aa18.4■□□□□ 0.54
NUCB1-208ENST00000460125 KDM5CP41229 1560 aa18.39■□□□□ 0.53
NUCB1-208ENST00000460125 REREQ9P2R6 1566 aa18.39■□□□□ 0.53
NUCB1-208ENST00000460125 ESF1Q9H501 851 aaKnown RBP18.38■□□□□ 0.53
NUCB1-208ENST00000460125 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
NUCB1-208ENST00000460125 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
NUCB1-208ENST00000460125 MYO5CQ9NQX4 1742 aa18.37■□□□□ 0.53
NUCB1-208ENST00000460125 AGLP35573 1532 aa18.35■□□□□ 0.53
NUCB1-208ENST00000460125 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
NUCB1-208ENST00000460125 MLH3Q9UHC1 1453 aa18.34■□□□□ 0.53
NUCB1-208ENST00000460125 CDK11AQ9UQ88 783 aaPredicted RBP18.34■□□□□ 0.53
NUCB1-208ENST00000460125 ATP1B4Q9UN42 357 aaPredicted RBP18.32■□□□□ 0.52
NUCB1-208ENST00000460125 ARHGAP5Q13017 1502 aa18.32■□□□□ 0.52
NUCB1-208ENST00000460125 CNTLNQ9NXG0 1405 aa18.32■□□□□ 0.52
NUCB1-208ENST00000460125 ABCA6Q8N139 1617 aa18.31■□□□□ 0.52
NUCB1-208ENST00000460125 ZNF335Q9H4Z2 1342 aaPredicted RBP18.31■□□□□ 0.52
NUCB1-208ENST00000460125 EEA1Q15075 1411 aa18.31■□□□□ 0.52
NUCB1-208ENST00000460125 KIF14Q15058 1648 aa18.31■□□□□ 0.52
NUCB1-208ENST00000460125 CAMSAP1Q5T5Y3 1602 aa18.31■□□□□ 0.52
NUCB1-208ENST00000460125 NCKAP5LQ9HCH0 1330 aa18.3■□□□□ 0.52
NUCB1-208ENST00000460125 TROQ12816 1431 aaPredicted RBP18.29■□□□□ 0.52
NUCB1-208ENST00000460125 NPATQ14207 1427 aa18.28■□□□□ 0.52
NUCB1-208ENST00000460125 FMN1Q68DA7 1419 aa18.26■□□□□ 0.51
NUCB1-208ENST00000460125 PKD2Q13563 968 aa18.25■□□□□ 0.51
NUCB1-208ENST00000460125 ZMYM3Q14202 1370 aa18.25■□□□□ 0.51
NUCB1-208ENST00000460125 CLIP1P30622 1438 aa18.23■□□□□ 0.51
NUCB1-208ENST00000460125 PLA2R1Q13018 1463 aa18.21■□□□□ 0.51
NUCB1-208ENST00000460125 CDC42BPBQ9Y5S2 1711 aa18.21■□□□□ 0.51
NUCB1-208ENST00000460125 ABCC1P33527 1531 aa18.21■□□□□ 0.51
NUCB1-208ENST00000460125 MROH2AA6NES4 1674 aa18.2■□□□□ 0.5
NUCB1-208ENST00000460125 HSPA1LP34931 641 aa18.2■□□□□ 0.5
NUCB1-208ENST00000460125 TCOF1Q13428 1488 aaKnown RBP18.2■□□□□ 0.5
NUCB1-208ENST00000460125 KIDINS220Q9ULH0 1771 aa18.19■□□□□ 0.5
NUCB1-208ENST00000460125 MED1Q15648 1581 aaPredicted RBP18.18■□□□□ 0.5
NUCB1-208ENST00000460125 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
NUCB1-208ENST00000460125 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
NUCB1-208ENST00000460125 ITSN2Q9NZM3 1697 aa18.16■□□□□ 0.5
NUCB1-208ENST00000460125 PREX2Q70Z35 1606 aa18.15■□□□□ 0.5
NUCB1-208ENST00000460125 PIP4K2BP78356 416 aa18.14■□□□□ 0.49
NUCB1-208ENST00000460125 ZNF142P52746 1687 aaPredicted RBP18.14■□□□□ 0.49
NUCB1-208ENST00000460125 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
NUCB1-208ENST00000460125 PTPRKQ15262 1439 aa18.14■□□□□ 0.49
NUCB1-208ENST00000460125 TOM1O60784 492 aa18.13■□□□□ 0.49
NUCB1-208ENST00000460125 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
NUCB1-208ENST00000460125 MYO3AQ8NEV4 1616 aa18.12■□□□□ 0.49
NUCB1-208ENST00000460125 SAMD9LQ8IVG5 1584 aa18.12■□□□□ 0.49
NUCB1-208ENST00000460125 UBTFP17480 764 aaKnown RBP18.11■□□□□ 0.49
NUCB1-208ENST00000460125 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
NUCB1-208ENST00000460125 LRRIQ1Q96JM4 1722 aa18.09■□□□□ 0.49
NUCB1-208ENST00000460125 CLTCQ00610 1675 aaKnown RBP18.09■□□□□ 0.49
NUCB1-208ENST00000460125 SUPT6HQ7KZ85 1726 aaKnown RBP18.07■□□□□ 0.48
NUCB1-208ENST00000460125 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
NUCB1-208ENST00000460125 ZNF777Q9ULD5 760 aaPredicted RBP18.07■□□□□ 0.48
NUCB1-208ENST00000460125 CPS1P31327 1500 aa18.07■□□□□ 0.48
NUCB1-208ENST00000460125 HNRNPMP52272 730 aaKnown RBP eCLIP18.06■□□□□ 0.48
NUCB1-208ENST00000460125 GGT6Q6P531 493 aa18.06■□□□□ 0.48
NUCB1-208ENST00000460125 EHMT2Q96KQ7 1210 aa18.06■□□□□ 0.48
NUCB1-208ENST00000460125 A2ML1A8K2U0 1454 aa18.05■□□□□ 0.48
NUCB1-208ENST00000460125 A2MP01023 1474 aa18.05■□□□□ 0.48
NUCB1-208ENST00000460125 SHANK2Q9UPX8 1470 aa18.05■□□□□ 0.48
NUCB1-208ENST00000460125 PLXNC1O60486 1568 aa18.04■□□□□ 0.48
NUCB1-208ENST00000460125 CDC42BPAQ5VT25 1732 aa18.04■□□□□ 0.48
NUCB1-208ENST00000460125 DNMT1P26358 1616 aaKnown RBP18.03■□□□□ 0.48
NUCB1-208ENST00000460125 SYCP2Q9BX26 1530 aa18.03■□□□□ 0.48
NUCB1-208ENST00000460125 CCDC18Q5T9S5 1454 aa18.02■□□□□ 0.48
NUCB1-208ENST00000460125 ATP7AQ04656 1500 aa18.02■□□□□ 0.47
NUCB1-208ENST00000460125 CASKIN1Q8WXD9 1431 aa18■□□□□ 0.47
NUCB1-208ENST00000460125 KIAA1107Q9UPP5 1409 aa18■□□□□ 0.47
NUCB1-208ENST00000460125 GPATCH8Q9UKJ3 1502 aaKnown RBP18■□□□□ 0.47
NUCB1-208ENST00000460125 NEURL4Q96JN8 1562 aa17.99■□□□□ 0.47
NUCB1-208ENST00000460125 INO80Q9ULG1 1556 aaPredicted RBP17.98■□□□□ 0.47
NUCB1-208ENST00000460125 ALKQ9UM73 1620 aa17.98■□□□□ 0.47
NUCB1-208ENST00000460125 ANKLE2Q86XL3 938 aa17.96■□□□□ 0.47
NUCB1-208ENST00000460125 VWDEQ8N2E2 1590 aa17.96■□□□□ 0.46
NUCB1-208ENST00000460125 PLEKHH2Q8IVE3 1493 aa17.95■□□□□ 0.46
NUCB1-208ENST00000460125 POLR1AO95602 1720 aaPredicted RBP17.95■□□□□ 0.46
NUCB1-208ENST00000460125 TNRQ92752 1358 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms