RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 WASHC2AQ641Q2 1341 aa28.99■■■□□ 2.23
CRAT-207ENST00000458362 L3MBTL2Q969R5 705 aa28.99■■■□□ 2.23
CRAT-207ENST00000458362 CEP170Q5SW79 1584 aa28.96■■■□□ 2.23
CRAT-207ENST00000458362 FKBP8Q14318 412 aa28.96■■■□□ 2.23
CRAT-207ENST00000458362 ANKRD30BQ9BXX2 1392 aa28.95■■■□□ 2.23
CRAT-207ENST00000458362 PRG4Q92954 1404 aaPredicted RBP28.95■■■□□ 2.22
CRAT-207ENST00000458362 BCANQ96GW7 911 aa28.94■■■□□ 2.22
CRAT-207ENST00000458362 CDK11AQ9UQ88 783 aaPredicted RBP28.93■■■□□ 2.22
CRAT-207ENST00000458362 ERCC6Q03468 1493 aa28.93■■■□□ 2.22
CRAT-207ENST00000458362 SYNJ2O15056 1496 aa28.92■■■□□ 2.22
CRAT-207ENST00000458362 EIF4G2P78344 907 aaKnown RBP eCLIP28.92■■■□□ 2.22
CRAT-207ENST00000458362 TROQ12816 1431 aaPredicted RBP28.92■■■□□ 2.22
CRAT-207ENST00000458362 TSHZ2Q9NRE2 1034 aa28.91■■■□□ 2.22
CRAT-207ENST00000458362 RPRD2Q5VT52 1461 aaKnown RBP28.91■■■□□ 2.22
CRAT-207ENST00000458362 PLB1Q6P1J6 1458 aa28.91■■■□□ 2.22
CRAT-207ENST00000458362 CAMSAP2Q08AD1 1489 aa28.89■■■□□ 2.21
CRAT-207ENST00000458362 TEX14Q8IWB6 1497 aa28.88■■■□□ 2.21
CRAT-207ENST00000458362 KIF14Q15058 1648 aa28.87■■■□□ 2.21
CRAT-207ENST00000458362 CHMP7Q8WUX9 453 aaPredicted RBP28.86■■■□□ 2.21
CRAT-207ENST00000458362 ITSN2Q9NZM3 1697 aa28.86■■■□□ 2.21
CRAT-207ENST00000458362 NBPF8Q3BBV2 869 aa28.85■■■□□ 2.21
CRAT-207ENST00000458362 ADCY10Q96PN6 1610 aa28.84■■■□□ 2.21
CRAT-207ENST00000458362 GPATCH8Q9UKJ3 1502 aaKnown RBP28.84■■■□□ 2.21
CRAT-207ENST00000458362 SLC4A1APQ9BWU0 796 aaKnown RBP28.83■■■□□ 2.21
CRAT-207ENST00000458362 ADGBQ8N7X0 1667 aa28.83■■■□□ 2.21
CRAT-207ENST00000458362 C11orf95C9JLR9 678 aaPredicted RBP28.83■■■□□ 2.21
CRAT-207ENST00000458362 PZPP20742 1482 aa28.82■■■□□ 2.2
CRAT-207ENST00000458362 NUP160Q12769 1436 aa28.82■■■□□ 2.2
CRAT-207ENST00000458362 CNTLNQ9NXG0 1405 aa28.82■■■□□ 2.2
CRAT-207ENST00000458362 CFDP1Q9UEE9 299 aaPredicted RBP28.82■■■□□ 2.2
CRAT-207ENST00000458362 NCOA1Q15788 1441 aa28.8■■■□□ 2.2
CRAT-207ENST00000458362 CROCC2H7BZ55 1655 aa28.79■■■□□ 2.2
CRAT-207ENST00000458362 FBLN2P98095 1184 aa28.78■■■□□ 2.2
CRAT-207ENST00000458362 CCDC7Q96M83 1385 aa28.78■■■□□ 2.2
CRAT-207ENST00000458362 NEFLP07196 543 aa28.78■■■□□ 2.2
CRAT-207ENST00000458362 CARMIL2Q6F5E8 1435 aa28.76■■■□□ 2.2
CRAT-207ENST00000458362 ZNF777Q9ULD5 760 aaPredicted RBP28.74■■■□□ 2.19
CRAT-207ENST00000458362 JPH4Q96JJ6 628 aa28.74■■■□□ 2.19
CRAT-207ENST00000458362 ADGRL2O95490 1459 aa28.74■■■□□ 2.19
CRAT-207ENST00000458362 HNRNPUQ00839 825 aaKnown RBP eCLIP28.73■■■□□ 2.19
CRAT-207ENST00000458362 SPATA31E1Q6ZUB1 1445 aa28.71■■■□□ 2.19
CRAT-207ENST00000458362 CCDC184Q52MB2 194 aa28.69■■■□□ 2.18
CRAT-207ENST00000458362 POLR1AO95602 1720 aaPredicted RBP28.68■■■□□ 2.18
CRAT-207ENST00000458362 CDC42BPAQ5VT25 1732 aa28.68■■■□□ 2.18
CRAT-207ENST00000458362 ABCA8O94911 1581 aa28.67■■■□□ 2.18
CRAT-207ENST00000458362 KIAA1107Q9UPP5 1409 aa28.66■■■□□ 2.18
CRAT-207ENST00000458362 MBD5Q9P267 1494 aa28.65■■■□□ 2.18
CRAT-207ENST00000458362 MYT1Q01538 1121 aa28.64■■■□□ 2.18
CRAT-207ENST00000458362 KIF7Q2M1P5 1343 aa28.64■■■□□ 2.17
CRAT-207ENST00000458362 ANKRD30AQ9BXX3 1397 aa28.63■■■□□ 2.17
CRAT-207ENST00000458362 PRKRIP1Q9H875 184 aaPredicted RBP28.63■■■□□ 2.17
CRAT-207ENST00000458362 ABCC10Q5T3U5 1492 aa28.63■■■□□ 2.17
CRAT-207ENST00000458362 ATP10BO94823 1461 aa28.61■■■□□ 2.17
CRAT-207ENST00000458362 PKD2Q13563 968 aa28.59■■■□□ 2.17
CRAT-207ENST00000458362 ANKRD50Q9ULJ7 1429 aa28.58■■■□□ 2.17
CRAT-207ENST00000458362 PLEKHD1A6NEE1 506 aa28.58■■■□□ 2.17
CRAT-207ENST00000458362 SHANK2Q9UPX8 1470 aa28.54■■■□□ 2.16
CRAT-207ENST00000458362 C9orf84Q5VXU9 1444 aa28.53■■■□□ 2.16
CRAT-207ENST00000458362 BCORL1Q5H9F3 1711 aa28.52■■■□□ 2.16
CRAT-207ENST00000458362 MRS2Q9HD23 443 aa28.5■■■□□ 2.15
CRAT-207ENST00000458362 ZNF326Q5BKZ1 582 aaKnown RBP28.48■■■□□ 2.15
CRAT-207ENST00000458362 FAM9BQ8IZU0 186 aa28.48■■■□□ 2.15
CRAT-207ENST00000458362 USP47Q96K76 1375 aa28.47■■■□□ 2.15
CRAT-207ENST00000458362 NUP155O75694 1391 aa28.47■■■□□ 2.15
CRAT-207ENST00000458362 IRX6P78412 446 aaPredicted RBP28.46■■■□□ 2.15
CRAT-207ENST00000458362 KDM5CP41229 1560 aa28.46■■■□□ 2.15
CRAT-207ENST00000458362 KDM5DQ9BY66 1539 aa28.44■■■□□ 2.14
CRAT-207ENST00000458362 DHX29Q7Z478 1369 aaKnown RBP28.43■■■□□ 2.14
CRAT-207ENST00000458362 ARHGEF5Q12774 1597 aa28.41■■■□□ 2.14
CRAT-207ENST00000458362 HNRNPMP52272 730 aaKnown RBP eCLIP28.41■■■□□ 2.14
CRAT-207ENST00000458362 UHRF1BP1Q6BDS2 1440 aa28.41■■■□□ 2.14
CRAT-207ENST00000458362 TSPY4P0CV99 314 aa28.39■■■□□ 2.14
CRAT-207ENST00000458362 TSPY10P0CW01 314 aa28.39■■■□□ 2.14
CRAT-207ENST00000458362 KIF15Q9NS87 1388 aa28.38■■■□□ 2.13
CRAT-207ENST00000458362 PTPRGP23470 1445 aa28.38■■■□□ 2.13
CRAT-207ENST00000458362 RALGAPBQ86X10 1494 aa28.38■■■□□ 2.13
CRAT-207ENST00000458362 CDC42BPBQ9Y5S2 1711 aa28.38■■■□□ 2.13
CRAT-207ENST00000458362 SAMD9LQ8IVG5 1584 aa28.37■■■□□ 2.13
CRAT-207ENST00000458362 ZBED9Q6R2W3 1325 aa28.36■■■□□ 2.13
CRAT-207ENST00000458362 ARHGEF12Q9NZN5 1544 aa28.36■■■□□ 2.13
CRAT-207ENST00000458362 RBM19Q9Y4C8 960 aaKnown RBP28.35■■■□□ 2.13
CRAT-207ENST00000458362 POLR3GLQ9BT43 218 aa28.34■■■□□ 2.13
CRAT-207ENST00000458362 PREX2Q70Z35 1606 aa28.34■■■□□ 2.13
CRAT-207ENST00000458362 CCDC141Q6ZP82 1450 aa28.3■■■□□ 2.12
CRAT-207ENST00000458362 CNGB1Q14028 1251 aaPredicted RBP28.29■■■□□ 2.12
CRAT-207ENST00000458362 CHD1O14646 1710 aa28.28■■■□□ 2.12
CRAT-207ENST00000458362 ARID4BQ4LE39 1312 aaPredicted RBP28.28■■■□□ 2.12
CRAT-207ENST00000458362 CARD11Q9BXL7 1154 aa28.27■■■□□ 2.12
CRAT-207ENST00000458362 KDM2AQ9Y2K7 1162 aa28.26■■■□□ 2.11
CRAT-207ENST00000458362 FAM135AQ9P2D6 1515 aa28.25■■■□□ 2.11
CRAT-207ENST00000458362 SHROOM2Q13796 1616 aa28.24■■■□□ 2.11
CRAT-207ENST00000458362 ERICH6BQ5W0A0 696 aa28.23■■■□□ 2.11
CRAT-207ENST00000458362 TTC37Q6PGP7 1564 aa28.22■■■□□ 2.11
CRAT-207ENST00000458362 RSPH4AQ5TD94 716 aa28.22■■■□□ 2.11
CRAT-207ENST00000458362 DCAF11Q8TEB1 546 aa28.22■■■□□ 2.11
CRAT-207ENST00000458362 SYCP2Q9BX26 1530 aa28.21■■■□□ 2.11
CRAT-207ENST00000458362 ANP32EQ9BTT0 268 aa28.2■■■□□ 2.11
CRAT-207ENST00000458362 PPP4R2Q9NY27 417 aa28.19■■■□□ 2.1
CRAT-207ENST00000458362 ROCK2O75116 1388 aaKnown RBP28.19■■■□□ 2.1
CRAT-207ENST00000458362 ST20-MTHFSA0A0A6YYL1 179 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms