RNA–Protein interactions for RNA: ENST00000457327.2

TREML3P-201, Transcript of triggering receptor expressed on myeloid cells like 3, pseudogene, humanhuman

BASIC

Gene TREML3P, Length 501 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREML3P-201ENST00000457327 ATP10AO60312 1499 aa12.01□□□□□ -0.49
TREML3P-201ENST00000457327 NUP153P49790 1475 aaKnown RBP12.01□□□□□ -0.49
TREML3P-201ENST00000457327 CFAP74Q9C0B2 1584 aa12.01□□□□□ -0.49
TREML3P-201ENST00000457327 EFCAB2Q5VUJ9 269 aa12□□□□□ -0.49
TREML3P-201ENST00000457327 UHRF1BP1Q6BDS2 1440 aa11.99□□□□□ -0.49
TREML3P-201ENST00000457327 PREX1Q8TCU6 1659 aa11.98□□□□□ -0.49
TREML3P-201ENST00000457327 HECW1Q76N89 1606 aa11.98□□□□□ -0.49
TREML3P-201ENST00000457327 TTC37Q6PGP7 1564 aa11.98□□□□□ -0.49
TREML3P-201ENST00000457327 SPATA31D1Q6ZQQ2 1576 aa11.98□□□□□ -0.49
TREML3P-201ENST00000457327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.98□□□□□ -0.49
TREML3P-201ENST00000457327 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
TREML3P-201ENST00000457327 ZMYM4Q5VZL5 1548 aa11.97□□□□□ -0.49
TREML3P-201ENST00000457327 SETD1BQ9UPS6 1966 aaKnown RBP11.97□□□□□ -0.49
TREML3P-201ENST00000457327 STRCQ7RTU9 1775 aa11.97□□□□□ -0.49
TREML3P-201ENST00000457327 SAMD9Q5K651 1589 aa11.96□□□□□ -0.49
TREML3P-201ENST00000457327 AFAP1Q8N556 730 aa11.96□□□□□ -0.49
TREML3P-201ENST00000457327 PTPRTO14522 1441 aa11.95□□□□□ -0.5
TREML3P-201ENST00000457327 PLCH2O75038 1416 aa11.95□□□□□ -0.5
TREML3P-201ENST00000457327 C9orf84Q5VXU9 1444 aa11.95□□□□□ -0.5
TREML3P-201ENST00000457327 ARHGEF12Q9NZN5 1544 aa11.95□□□□□ -0.5
TREML3P-201ENST00000457327 UBAP1LF5GYI3 381 aa11.94□□□□□ -0.5
TREML3P-201ENST00000457327 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
TREML3P-201ENST00000457327 TRAPPC8Q9Y2L5 1435 aa11.89□□□□□ -0.51
TREML3P-201ENST00000457327 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
TREML3P-201ENST00000457327 LTBP4Q8N2S1 1624 aa11.87□□□□□ -0.51
TREML3P-201ENST00000457327 IQSEC2Q5JU85 1478 aa11.87□□□□□ -0.51
TREML3P-201ENST00000457327 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
TREML3P-201ENST00000457327 CDK13Q14004 1512 aaKnown RBP11.86□□□□□ -0.51
TREML3P-201ENST00000457327 ZNF518AQ6AHZ1 1483 aa11.86□□□□□ -0.51
TREML3P-201ENST00000457327 ZNF335Q9H4Z2 1342 aaPredicted RBP11.86□□□□□ -0.51
TREML3P-201ENST00000457327 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
TREML3P-201ENST00000457327 C3P01024 1663 aa11.84□□□□□ -0.51
TREML3P-201ENST00000457327 ARHGAP5Q13017 1502 aa11.83□□□□□ -0.52
TREML3P-201ENST00000457327 UBTFP17480 764 aaKnown RBP11.83□□□□□ -0.52
TREML3P-201ENST00000457327 PIP4K2BP78356 416 aa11.83□□□□□ -0.52
TREML3P-201ENST00000457327 NCOA1Q15788 1441 aa11.83□□□□□ -0.52
TREML3P-201ENST00000457327 MYO5CQ9NQX4 1742 aa11.83□□□□□ -0.52
TREML3P-201ENST00000457327 PKD2Q13563 968 aa11.82□□□□□ -0.52
TREML3P-201ENST00000457327 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
TREML3P-201ENST00000457327 HSPA1LP34931 641 aa11.81□□□□□ -0.52
TREML3P-201ENST00000457327 CNTLNQ9NXG0 1405 aa11.8□□□□□ -0.52
TREML3P-201ENST00000457327 CAMSAP1Q5T5Y3 1602 aa11.8□□□□□ -0.52
TREML3P-201ENST00000457327 TOM1O60784 492 aa11.8□□□□□ -0.52
TREML3P-201ENST00000457327 PHF23Q9BUL5 403 aaPredicted RBP11.8□□□□□ -0.52
TREML3P-201ENST00000457327 CLIP1P30622 1438 aa11.79□□□□□ -0.52
TREML3P-201ENST00000457327 MLH3Q9UHC1 1453 aa11.79□□□□□ -0.52
TREML3P-201ENST00000457327 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
TREML3P-201ENST00000457327 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
TREML3P-201ENST00000457327 EEA1Q15075 1411 aa11.78□□□□□ -0.52
TREML3P-201ENST00000457327 PPP6R1Q9UPN7 881 aa11.78□□□□□ -0.52
TREML3P-201ENST00000457327 KDM5CP41229 1560 aa11.78□□□□□ -0.52
TREML3P-201ENST00000457327 FMN1Q68DA7 1419 aa11.77□□□□□ -0.52
TREML3P-201ENST00000457327 AGLP35573 1532 aa11.77□□□□□ -0.52
TREML3P-201ENST00000457327 TROQ12816 1431 aaPredicted RBP11.77□□□□□ -0.53
TREML3P-201ENST00000457327 REREQ9P2R6 1566 aa11.76□□□□□ -0.53
TREML3P-201ENST00000457327 GGT6Q6P531 493 aa11.76□□□□□ -0.53
TREML3P-201ENST00000457327 NPATQ14207 1427 aa11.76□□□□□ -0.53
TREML3P-201ENST00000457327 KIF14Q15058 1648 aa11.75□□□□□ -0.53
TREML3P-201ENST00000457327 HNRNPMP52272 730 aaKnown RBP eCLIP11.74□□□□□ -0.53
TREML3P-201ENST00000457327 SPAG9O60271 1321 aaKnown RBP11.74□□□□□ -0.53
TREML3P-201ENST00000457327 ABCA6Q8N139 1617 aa11.74□□□□□ -0.53
TREML3P-201ENST00000457327 SENP3Q9H4L4 574 aaPredicted RBP11.73□□□□□ -0.53
TREML3P-201ENST00000457327 CDC42BPBQ9Y5S2 1711 aa11.72□□□□□ -0.53
TREML3P-201ENST00000457327 SUPT6HQ7KZ85 1726 aaKnown RBP11.7□□□□□ -0.54
TREML3P-201ENST00000457327 PLA2R1Q13018 1463 aa11.7□□□□□ -0.54
TREML3P-201ENST00000457327 KIDINS220Q9ULH0 1771 aa11.69□□□□□ -0.54
TREML3P-201ENST00000457327 MED1Q15648 1581 aaPredicted RBP11.69□□□□□ -0.54
TREML3P-201ENST00000457327 ANKLE2Q86XL3 938 aa11.68□□□□□ -0.54
TREML3P-201ENST00000457327 MROH2AA6NES4 1674 aa11.68□□□□□ -0.54
TREML3P-201ENST00000457327 PTPRKQ15262 1439 aa11.68□□□□□ -0.54
TREML3P-201ENST00000457327 ABCC1P33527 1531 aa11.67□□□□□ -0.54
TREML3P-201ENST00000457327 TCOF1Q13428 1488 aaKnown RBP11.67□□□□□ -0.54
TREML3P-201ENST00000457327 ARHGAP35Q9NRY4 1499 aa11.67□□□□□ -0.54
TREML3P-201ENST00000457327 CLTCQ00610 1675 aaKnown RBP11.66□□□□□ -0.54
TREML3P-201ENST00000457327 ITSN2Q9NZM3 1697 aa11.66□□□□□ -0.54
TREML3P-201ENST00000457327 CFDP1Q9UEE9 299 aaPredicted RBP11.66□□□□□ -0.54
TREML3P-201ENST00000457327 THEMISQ8N1K5 641 aaPredicted RBP11.65□□□□□ -0.54
TREML3P-201ENST00000457327 CEP170BQ9Y4F5 1589 aaPredicted RBP11.65□□□□□ -0.54
TREML3P-201ENST00000457327 PREX2Q70Z35 1606 aa11.64□□□□□ -0.55
TREML3P-201ENST00000457327 SHANK2Q9UPX8 1470 aa11.64□□□□□ -0.55
TREML3P-201ENST00000457327 SAMD9LQ8IVG5 1584 aa11.64□□□□□ -0.55
TREML3P-201ENST00000457327 FBXO31Q5XUX0 539 aaPredicted RBP11.64□□□□□ -0.55
TREML3P-201ENST00000457327 A2MP01023 1474 aa11.63□□□□□ -0.55
TREML3P-201ENST00000457327 CPS1P31327 1500 aa11.63□□□□□ -0.55
TREML3P-201ENST00000457327 MYO3AQ8NEV4 1616 aa11.63□□□□□ -0.55
TREML3P-201ENST00000457327 A2ML1A8K2U0 1454 aa11.63□□□□□ -0.55
TREML3P-201ENST00000457327 LRRIQ1Q96JM4 1722 aa11.61□□□□□ -0.55
TREML3P-201ENST00000457327 ZNF142P52746 1687 aaPredicted RBP11.61□□□□□ -0.55
TREML3P-201ENST00000457327 CCDC18Q5T9S5 1454 aa11.6□□□□□ -0.55
TREML3P-201ENST00000457327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.6□□□□□ -0.55
TREML3P-201ENST00000457327 CDC42BPAQ5VT25 1732 aa11.6□□□□□ -0.55
TREML3P-201ENST00000457327 DNMT1P26358 1616 aaKnown RBP11.6□□□□□ -0.55
TREML3P-201ENST00000457327 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
TREML3P-201ENST00000457327 TNRQ92752 1358 aa11.59□□□□□ -0.55
TREML3P-201ENST00000457327 KIF3BO15066 747 aa11.59□□□□□ -0.55
TREML3P-201ENST00000457327 ATP7AQ04656 1500 aa11.59□□□□□ -0.55
TREML3P-201ENST00000457327 SYCP2Q9BX26 1530 aa11.59□□□□□ -0.55
TREML3P-201ENST00000457327 GPATCH8Q9UKJ3 1502 aaKnown RBP11.59□□□□□ -0.55
TREML3P-201ENST00000457327 CASKIN1Q8WXD9 1431 aa11.59□□□□□ -0.55
TREML3P-201ENST00000457327 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms