RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 SCAPERQ9BY12 1400 aa22.24■■□□□ 1.15
SNHG17-208ENST00000456953 PREX1Q8TCU6 1659 aa22.23■■□□□ 1.15
SNHG17-208ENST00000456953 PLCH2O75038 1416 aa22.23■■□□□ 1.15
SNHG17-208ENST00000456953 ATP10AO60312 1499 aa22.22■■□□□ 1.15
SNHG17-208ENST00000456953 C9orf84Q5VXU9 1444 aa22.21■■□□□ 1.15
SNHG17-208ENST00000456953 EEA1Q15075 1411 aa22.2■■□□□ 1.14
SNHG17-208ENST00000456953 DMRT2Q9Y5R5 561 aa22.19■■□□□ 1.14
SNHG17-208ENST00000456953 DISP3Q9P2K9 1392 aa22.19■■□□□ 1.14
SNHG17-208ENST00000456953 CDK13Q14004 1512 aaKnown RBP22.18■■□□□ 1.14
SNHG17-208ENST00000456953 EFCAB2Q5VUJ9 269 aa22.15■■□□□ 1.14
SNHG17-208ENST00000456953 SOCS7O14512 581 aa22.14■■□□□ 1.13
SNHG17-208ENST00000456953 CEBPAP49715 358 aaPredicted RBP22.14■■□□□ 1.13
SNHG17-208ENST00000456953 ILDR2Q71H61 639 aa22.14■■□□□ 1.13
SNHG17-208ENST00000456953 STRCQ7RTU9 1775 aa22.14■■□□□ 1.13
SNHG17-208ENST00000456953 UHRF1BP1Q6BDS2 1440 aa22.13■■□□□ 1.13
SNHG17-208ENST00000456953 MYO5CQ9NQX4 1742 aa22.11■■□□□ 1.13
SNHG17-208ENST00000456953 ZNF518AQ6AHZ1 1483 aa22.11■■□□□ 1.13
SNHG17-208ENST00000456953 SETD1BQ9UPS6 1966 aaKnown RBP22.09■■□□□ 1.13
SNHG17-208ENST00000456953 KDM5CP41229 1560 aa22.07■■□□□ 1.12
SNHG17-208ENST00000456953 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
SNHG17-208ENST00000456953 PTPRTO14522 1441 aa22.06■■□□□ 1.12
SNHG17-208ENST00000456953 REREQ9P2R6 1566 aa22.04■■□□□ 1.12
SNHG17-208ENST00000456953 FMN1Q68DA7 1419 aa22.04■■□□□ 1.12
SNHG17-208ENST00000456953 KIF14Q15058 1648 aa22.03■■□□□ 1.12
SNHG17-208ENST00000456953 AFAP1Q8N556 730 aa22.03■■□□□ 1.12
SNHG17-208ENST00000456953 SPATA31D1Q6ZQQ2 1576 aa22.03■■□□□ 1.12
SNHG17-208ENST00000456953 ARHGAP5Q13017 1502 aa22.02■■□□□ 1.12
SNHG17-208ENST00000456953 DIP2CQ9Y2E4 1556 aa22.02■■□□□ 1.12
SNHG17-208ENST00000456953 ATP1B4Q9UN42 357 aaPredicted RBP22.01■■□□□ 1.11
SNHG17-208ENST00000456953 TROQ12816 1431 aaPredicted RBP21.99■■□□□ 1.11
SNHG17-208ENST00000456953 C3P01024 1663 aa21.99■■□□□ 1.11
SNHG17-208ENST00000456953 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
SNHG17-208ENST00000456953 MLH3Q9UHC1 1453 aa21.98■■□□□ 1.11
SNHG17-208ENST00000456953 IQSEC2Q5JU85 1478 aa21.97■■□□□ 1.11
SNHG17-208ENST00000456953 CLIP1P30622 1438 aa21.97■■□□□ 1.11
SNHG17-208ENST00000456953 AGLP35573 1532 aa21.96■■□□□ 1.11
SNHG17-208ENST00000456953 ABCA6Q8N139 1617 aa21.96■■□□□ 1.11
SNHG17-208ENST00000456953 LTBP4Q8N2S1 1624 aa21.96■■□□□ 1.11
SNHG17-208ENST00000456953 ESF1Q9H501 851 aaKnown RBP21.96■■□□□ 1.11
SNHG17-208ENST00000456953 TRAPPC8Q9Y2L5 1435 aa21.96■■□□□ 1.11
SNHG17-208ENST00000456953 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
SNHG17-208ENST00000456953 ARHGAP35Q9NRY4 1499 aa21.92■■□□□ 1.1
SNHG17-208ENST00000456953 CNTLNQ9NXG0 1405 aa21.91■■□□□ 1.1
SNHG17-208ENST00000456953 CDC42BPBQ9Y5S2 1711 aa21.9■■□□□ 1.1
SNHG17-208ENST00000456953 ABCC1P33527 1531 aa21.89■■□□□ 1.09
SNHG17-208ENST00000456953 UBTFP17480 764 aaKnown RBP21.88■■□□□ 1.09
SNHG17-208ENST00000456953 PREX2Q70Z35 1606 aa21.87■■□□□ 1.09
SNHG17-208ENST00000456953 NPATQ14207 1427 aa21.86■■□□□ 1.09
SNHG17-208ENST00000456953 ITSN2Q9NZM3 1697 aa21.85■■□□□ 1.09
SNHG17-208ENST00000456953 LRRIQ1Q96JM4 1722 aa21.84■■□□□ 1.09
SNHG17-208ENST00000456953 CAMSAP1Q5T5Y3 1602 aa21.84■■□□□ 1.09
SNHG17-208ENST00000456953 KIDINS220Q9ULH0 1771 aa21.83■■□□□ 1.09
SNHG17-208ENST00000456953 MROH2AA6NES4 1674 aa21.82■■□□□ 1.08
SNHG17-208ENST00000456953 EHMT2Q96KQ7 1210 aa21.8■■□□□ 1.08
SNHG17-208ENST00000456953 CCDC18Q5T9S5 1454 aa21.77■■□□□ 1.08
SNHG17-208ENST00000456953 ZMYM3Q14202 1370 aa21.77■■□□□ 1.08
SNHG17-208ENST00000456953 UBAP1LF5GYI3 381 aa21.76■■□□□ 1.07
SNHG17-208ENST00000456953 SAMD9LQ8IVG5 1584 aa21.75■■□□□ 1.07
SNHG17-208ENST00000456953 ZNF335Q9H4Z2 1342 aaPredicted RBP21.75■■□□□ 1.07
SNHG17-208ENST00000456953 NCKAP5LQ9HCH0 1330 aa21.75■■□□□ 1.07
SNHG17-208ENST00000456953 CDC42BPAQ5VT25 1732 aa21.75■■□□□ 1.07
SNHG17-208ENST00000456953 PLA2R1Q13018 1463 aa21.73■■□□□ 1.07
SNHG17-208ENST00000456953 PKD2Q13563 968 aa21.73■■□□□ 1.07
SNHG17-208ENST00000456953 ZNF142P52746 1687 aaPredicted RBP21.72■■□□□ 1.07
SNHG17-208ENST00000456953 CASKIN1Q8WXD9 1431 aa21.72■■□□□ 1.07
SNHG17-208ENST00000456953 SPAG9O60271 1321 aaKnown RBP21.71■■□□□ 1.07
SNHG17-208ENST00000456953 MYO3AQ8NEV4 1616 aa21.7■■□□□ 1.06
SNHG17-208ENST00000456953 TCOF1Q13428 1488 aaKnown RBP21.7■■□□□ 1.06
SNHG17-208ENST00000456953 SYCP2Q9BX26 1530 aa21.69■■□□□ 1.06
SNHG17-208ENST00000456953 SUPT6HQ7KZ85 1726 aaKnown RBP21.69■■□□□ 1.06
SNHG17-208ENST00000456953 CEP170BQ9Y4F5 1589 aaPredicted RBP21.68■■□□□ 1.06
SNHG17-208ENST00000456953 CLTCQ00610 1675 aaKnown RBP21.68■■□□□ 1.06
SNHG17-208ENST00000456953 PLXNC1O60486 1568 aa21.67■■□□□ 1.06
SNHG17-208ENST00000456953 PTPRKQ15262 1439 aa21.67■■□□□ 1.06
SNHG17-208ENST00000456953 ZNF777Q9ULD5 760 aaPredicted RBP21.67■■□□□ 1.06
SNHG17-208ENST00000456953 ATP7AQ04656 1500 aa21.66■■□□□ 1.06
SNHG17-208ENST00000456953 GPATCH8Q9UKJ3 1502 aaKnown RBP21.64■■□□□ 1.05
SNHG17-208ENST00000456953 A2MP01023 1474 aa21.64■■□□□ 1.05
SNHG17-208ENST00000456953 KIAA1107Q9UPP5 1409 aa21.63■■□□□ 1.05
SNHG17-208ENST00000456953 INO80Q9ULG1 1556 aaPredicted RBP21.63■■□□□ 1.05
SNHG17-208ENST00000456953 HNRNPMP52272 730 aaKnown RBP eCLIP21.63■■□□□ 1.051e-7■■■■□ 19.4
SNHG17-208ENST00000456953 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
SNHG17-208ENST00000456953 PLEKHH2Q8IVE3 1493 aa21.63■■□□□ 1.05
SNHG17-208ENST00000456953 FYCO1Q9BQS8 1478 aa21.63■■□□□ 1.05
SNHG17-208ENST00000456953 GGT6Q6P531 493 aa21.59■■□□□ 1.05
SNHG17-208ENST00000456953 A2ML1A8K2U0 1454 aa21.58■■□□□ 1.04
SNHG17-208ENST00000456953 CFDP1Q9UEE9 299 aaPredicted RBP21.57■■□□□ 1.04
SNHG17-208ENST00000456953 HSPA1LP34931 641 aa21.55■■□□□ 1.04
SNHG17-208ENST00000456953 MED1Q15648 1581 aaPredicted RBP21.55■■□□□ 1.04
SNHG17-208ENST00000456953 ADGBQ8N7X0 1667 aa21.55■■□□□ 1.04
SNHG17-208ENST00000456953 DNMT1P26358 1616 aaKnown RBP21.55■■□□□ 1.04
SNHG17-208ENST00000456953 CPS1P31327 1500 aa21.54■■□□□ 1.04
SNHG17-208ENST00000456953 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
SNHG17-208ENST00000456953 TOM1O60784 492 aa21.53■■□□□ 1.04
SNHG17-208ENST00000456953 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
SNHG17-208ENST00000456953 PIP4K2BP78356 416 aa21.51■■□□□ 1.03
SNHG17-208ENST00000456953 POLR1AO95602 1720 aaPredicted RBP21.5■■□□□ 1.03
SNHG17-208ENST00000456953 SHANK2Q9UPX8 1470 aa21.5■■□□□ 1.03
SNHG17-208ENST00000456953 NEURL4Q96JN8 1562 aa21.48■■□□□ 1.03
SNHG17-208ENST00000456953 TNRQ92752 1358 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms