RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TROQ12816 1431 aaPredicted RBP26.16■■□□□ 1.78
SEMA3B-209ENST00000456560 PLB1Q6P1J6 1458 aa26.14■■□□□ 1.78
SEMA3B-209ENST00000456560 CARMIL2Q6F5E8 1435 aa26.13■■□□□ 1.77
SEMA3B-209ENST00000456560 PRG4Q92954 1404 aaPredicted RBP26.13■■□□□ 1.77
SEMA3B-209ENST00000456560 TRIM52Q96A61 297 aa26.13■■□□□ 1.77
SEMA3B-209ENST00000456560 ZNF644Q9H582 1327 aaPredicted RBP26.11■■□□□ 1.77
SEMA3B-209ENST00000456560 MPHOSPH9Q99550 1183 aa26.11■■□□□ 1.77
SEMA3B-209ENST00000456560 HIRIP3Q9BW71 556 aaPredicted RBP26.1■■□□□ 1.77
SEMA3B-209ENST00000456560 ADCY10Q96PN6 1610 aa26.1■■□□□ 1.77
SEMA3B-209ENST00000456560 KCNH8Q96L42 1107 aa26.06■■□□□ 1.76
SEMA3B-209ENST00000456560 ITSN2Q9NZM3 1697 aa26.06■■□□□ 1.76
SEMA3B-209ENST00000456560 GPATCH8Q9UKJ3 1502 aaKnown RBP26.05■■□□□ 1.76
SEMA3B-209ENST00000456560 CAMSAP2Q08AD1 1489 aa26.03■■□□□ 1.76
SEMA3B-209ENST00000456560 KIF14Q15058 1648 aa26.03■■□□□ 1.76
SEMA3B-209ENST00000456560 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
SEMA3B-209ENST00000456560 ABCA8O94911 1581 aa26.03■■□□□ 1.76
SEMA3B-209ENST00000456560 OSCARQ8IYS5 282 aa26■■□□□ 1.75
SEMA3B-209ENST00000456560 CFDP1Q9UEE9 299 aaPredicted RBP26■■□□□ 1.75
SEMA3B-209ENST00000456560 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
SEMA3B-209ENST00000456560 ANKRD30BQ9BXX2 1392 aa25.98■■□□□ 1.75
SEMA3B-209ENST00000456560 SHROOM2Q13796 1616 aa25.96■■□□□ 1.75
SEMA3B-209ENST00000456560 ADGBQ8N7X0 1667 aa25.95■■□□□ 1.75
SEMA3B-209ENST00000456560 CCER2I3L3R5 266 aa25.95■■□□□ 1.75
SEMA3B-209ENST00000456560 ADGRL2O95490 1459 aa25.94■■□□□ 1.74
SEMA3B-209ENST00000456560 NCOA1Q15788 1441 aa25.94■■□□□ 1.74
SEMA3B-209ENST00000456560 FOXD1Q16676 465 aa25.94■■□□□ 1.74
SEMA3B-209ENST00000456560 CROCC2H7BZ55 1655 aa25.93■■□□□ 1.74
SEMA3B-209ENST00000456560 ATP10BO94823 1461 aa25.93■■□□□ 1.74
SEMA3B-209ENST00000456560 RPRD2Q5VT52 1461 aaKnown RBP25.93■■□□□ 1.74
SEMA3B-209ENST00000456560 L3MBTL2Q969R5 705 aa25.92■■□□□ 1.74
SEMA3B-209ENST00000456560 ABCC10Q5T3U5 1492 aa25.91■■□□□ 1.74
SEMA3B-209ENST00000456560 ANP32CO43423 234 aa25.91■■□□□ 1.74
SEMA3B-209ENST00000456560 PLEKHD1A6NEE1 506 aa25.9■■□□□ 1.74
SEMA3B-209ENST00000456560 PZPP20742 1482 aa25.89■■□□□ 1.73
SEMA3B-209ENST00000456560 CDC42BPAQ5VT25 1732 aa25.88■■□□□ 1.73
SEMA3B-209ENST00000456560 HSPA5P11021 654 aaKnown RBP25.87■■□□□ 1.73
SEMA3B-209ENST00000456560 SLC4A1APQ9BWU0 796 aaKnown RBP25.87■■□□□ 1.73
SEMA3B-209ENST00000456560 TEX14Q8IWB6 1497 aa25.86■■□□□ 1.73
SEMA3B-209ENST00000456560 ZNF777Q9ULD5 760 aaPredicted RBP25.86■■□□□ 1.73
SEMA3B-209ENST00000456560 PTPRGP23470 1445 aa25.85■■□□□ 1.73
SEMA3B-209ENST00000456560 ANKRD30AQ9BXX3 1397 aa25.82■■□□□ 1.72
SEMA3B-209ENST00000456560 EIF4G2P78344 907 aaKnown RBP eCLIP25.82■■□□□ 1.72
SEMA3B-209ENST00000456560 SUPT16HQ9Y5B9 1047 aaKnown RBP25.8■■□□□ 1.72
SEMA3B-209ENST00000456560 SHANK2Q9UPX8 1470 aa25.8■■□□□ 1.72
SEMA3B-209ENST00000456560 WASHC2AQ641Q2 1341 aa25.8■■□□□ 1.72
SEMA3B-209ENST00000456560 NBPF8Q3BBV2 869 aa25.77■■□□□ 1.72
SEMA3B-209ENST00000456560 KIAA1107Q9UPP5 1409 aa25.75■■□□□ 1.71
SEMA3B-209ENST00000456560 ANKRD50Q9ULJ7 1429 aa25.74■■□□□ 1.71
SEMA3B-209ENST00000456560 C9orf84Q5VXU9 1444 aa25.73■■□□□ 1.71
SEMA3B-209ENST00000456560 ARHGEF5Q12774 1597 aa25.71■■□□□ 1.71
SEMA3B-209ENST00000456560 MBD5Q9P267 1494 aa25.68■■□□□ 1.7
SEMA3B-209ENST00000456560 SPATA31E1Q6ZUB1 1445 aa25.68■■□□□ 1.7
SEMA3B-209ENST00000456560 PKD2Q13563 968 aa25.67■■□□□ 1.7
SEMA3B-209ENST00000456560 CNTLNQ9NXG0 1405 aa25.66■■□□□ 1.7
SEMA3B-209ENST00000456560 KDM5DQ9BY66 1539 aa25.66■■□□□ 1.7
SEMA3B-209ENST00000456560 C11orf95C9JLR9 678 aaPredicted RBP25.65■■□□□ 1.7
SEMA3B-209ENST00000456560 CCDC7Q96M83 1385 aa25.65■■□□□ 1.7
SEMA3B-209ENST00000456560 PREX2Q70Z35 1606 aa25.64■■□□□ 1.7
SEMA3B-209ENST00000456560 TSPY4P0CV99 314 aa25.64■■□□□ 1.69
SEMA3B-209ENST00000456560 TSPY10P0CW01 314 aa25.64■■□□□ 1.69
SEMA3B-209ENST00000456560 CDC42BPBQ9Y5S2 1711 aa25.64■■□□□ 1.69
SEMA3B-209ENST00000456560 HNRNPMP52272 730 aaKnown RBP eCLIP25.62■■□□□ 1.69
SEMA3B-209ENST00000456560 SAMD9LQ8IVG5 1584 aa25.62■■□□□ 1.69
SEMA3B-209ENST00000456560 NUP155O75694 1391 aa25.61■■□□□ 1.69
SEMA3B-209ENST00000456560 POLR1AO95602 1720 aaPredicted RBP25.59■■□□□ 1.69
SEMA3B-209ENST00000456560 KIF15Q9NS87 1388 aa25.58■■□□□ 1.69
SEMA3B-209ENST00000456560 CCDC141Q6ZP82 1450 aa25.58■■□□□ 1.69
SEMA3B-209ENST00000456560 ABCC2Q92887 1545 aa25.57■■□□□ 1.68
SEMA3B-209ENST00000456560 RSPH4AQ5TD94 716 aa25.56■■□□□ 1.68
SEMA3B-209ENST00000456560 KIF7Q2M1P5 1343 aa25.52■■□□□ 1.68
SEMA3B-209ENST00000456560 TTC37Q6PGP7 1564 aa25.52■■□□□ 1.68
SEMA3B-209ENST00000456560 UHRF1BP1Q6BDS2 1440 aa25.52■■□□□ 1.68
SEMA3B-209ENST00000456560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.52■■□□□ 1.68
SEMA3B-209ENST00000456560 MAST1Q9Y2H9 1570 aa25.5■■□□□ 1.67
SEMA3B-209ENST00000456560 ARHGEF12Q9NZN5 1544 aa25.49■■□□□ 1.67
SEMA3B-209ENST00000456560 PRKRIP1Q9H875 184 aaPredicted RBP25.47■■□□□ 1.67
SEMA3B-209ENST00000456560 SYCP2Q9BX26 1530 aa25.46■■□□□ 1.67
SEMA3B-209ENST00000456560 UHRF1BP1LA0JNW5 1464 aa25.46■■□□□ 1.67
SEMA3B-209ENST00000456560 ARHGAP5Q13017 1502 aa25.46■■□□□ 1.67
SEMA3B-209ENST00000456560 CYB5RLQ6IPT4 315 aa25.45■■□□□ 1.67
SEMA3B-209ENST00000456560 TSHZ2Q9NRE2 1034 aa25.45■■□□□ 1.66
SEMA3B-209ENST00000456560 USP47Q96K76 1375 aa25.45■■□□□ 1.66
SEMA3B-209ENST00000456560 KDM5CP41229 1560 aa25.44■■□□□ 1.66
SEMA3B-209ENST00000456560 RALGAPBQ86X10 1494 aa25.44■■□□□ 1.66
SEMA3B-209ENST00000456560 RIMBP3CA6NJZ7 1639 aa25.44■■□□□ 1.66
SEMA3B-209ENST00000456560 RIMBP3BA6NNM3 1639 aa25.44■■□□□ 1.66
SEMA3B-209ENST00000456560 RIMBP3Q9UFD9 1639 aa25.44■■□□□ 1.66
SEMA3B-209ENST00000456560 FKBP8Q14318 412 aa25.44■■□□□ 1.66
SEMA3B-209ENST00000456560 FAM135AQ9P2D6 1515 aa25.43■■□□□ 1.66
SEMA3B-209ENST00000456560 ZCCHC11Q5TAX3 1644 aaKnown RBP25.43■■□□□ 1.66
SEMA3B-209ENST00000456560 MYO5CQ9NQX4 1742 aa25.43■■□□□ 1.66
SEMA3B-209ENST00000456560 BCORL1Q5H9F3 1711 aa25.43■■□□□ 1.66
SEMA3B-209ENST00000456560 PLEKHH2Q8IVE3 1493 aa25.42■■□□□ 1.66
SEMA3B-209ENST00000456560 CCDC184Q52MB2 194 aa25.41■■□□□ 1.66
SEMA3B-209ENST00000456560 HNRNPUQ00839 825 aaKnown RBP eCLIP25.4■■□□□ 1.66
SEMA3B-209ENST00000456560 ZNF326Q5BKZ1 582 aaKnown RBP25.4■■□□□ 1.66
SEMA3B-209ENST00000456560 UNC13BO14795 1591 aa25.39■■□□□ 1.66
SEMA3B-209ENST00000456560 PLXNC1O60486 1568 aa25.38■■□□□ 1.65
SEMA3B-209ENST00000456560 ARID4BQ4LE39 1312 aaPredicted RBP25.38■■□□□ 1.65
SEMA3B-209ENST00000456560 NEFLP07196 543 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms