RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 FANCD2Q9BXW9 1451 aa8.39□□□□□ -1.07
HMGB1P4-201ENST00000455362 PYGBP11216 843 aa8.39□□□□□ -1.07
HMGB1P4-201ENST00000455362 KIF12Q96FN5 646 aa8.39□□□□□ -1.07
HMGB1P4-201ENST00000455362 PDS5BQ9NTI5 1447 aa8.38□□□□□ -1.07
HMGB1P4-201ENST00000455362 GABBR2O75899 941 aa8.38□□□□□ -1.07
HMGB1P4-201ENST00000455362 KCNV2Q8TDN2 545 aa8.38□□□□□ -1.07
HMGB1P4-201ENST00000455362 SYNJ1O43426 1573 aa8.37□□□□□ -1.07
HMGB1P4-201ENST00000455362 ZC3H15Q8WU90 426 aaKnown RBP8.36□□□□□ -1.07
HMGB1P4-201ENST00000455362 CUX1P39880 1505 aa8.35□□□□□ -1.07
HMGB1P4-201ENST00000455362 ZNF467Q7Z7K2 595 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P4-201ENST00000455362 ZMYND15Q9H091 742 aa8.35□□□□□ -1.07
HMGB1P4-201ENST00000455362 SLC24A3Q9HC58 644 aa8.35□□□□□ -1.07
HMGB1P4-201ENST00000455362 TOP2BQ02880 1626 aa8.35□□□□□ -1.07
HMGB1P4-201ENST00000455362 BIVM-ERCC5R4GMW8 1640 aa8.34□□□□□ -1.07
HMGB1P4-201ENST00000455362 MAP3K13O43283 966 aa8.34□□□□□ -1.07
HMGB1P4-201ENST00000455362 RSPH6AQ9H0K4 717 aa8.34□□□□□ -1.07
HMGB1P4-201ENST00000455362 KIF21AQ7Z4S6 1674 aa8.34□□□□□ -1.08
HMGB1P4-201ENST00000455362 CEP164Q9UPV0 1460 aa8.33□□□□□ -1.08
HMGB1P4-201ENST00000455362 GALR2O43603 387 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P4-201ENST00000455362 PAK3O75914 559 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P4-201ENST00000455362 HRCP23327 699 aa8.32□□□□□ -1.08
HMGB1P4-201ENST00000455362 MS4A3Q96HJ5 214 aa8.31□□□□□ -1.08
HMGB1P4-201ENST00000455362 POTEIP0CG38 1075 aa8.3□□□□□ -1.08
HMGB1P4-201ENST00000455362 CLCN6P51797 869 aa8.3□□□□□ -1.08
HMGB1P4-201ENST00000455362 PDAP1Q13442 181 aaKnown RBP8.3□□□□□ -1.08
HMGB1P4-201ENST00000455362 TRPC6Q9Y210 931 aa8.3□□□□□ -1.08
HMGB1P4-201ENST00000455362 DNMBPQ6XZF7 1577 aa8.3□□□□□ -1.08
HMGB1P4-201ENST00000455362 URB2Q14146 1524 aaKnown RBP8.29□□□□□ -1.08
HMGB1P4-201ENST00000455362 TOPBP1Q92547 1522 aa8.29□□□□□ -1.08
HMGB1P4-201ENST00000455362 FAM9AQ8IZU1 332 aaPredicted RBP8.29□□□□□ -1.08
HMGB1P4-201ENST00000455362 ARID3AQ99856 593 aa8.29□□□□□ -1.08
HMGB1P4-201ENST00000455362 IFNL1Q8IU54 200 aa8.28□□□□□ -1.08
HMGB1P4-201ENST00000455362 SOGA1O94964 1423 aa8.28□□□□□ -1.08
HMGB1P4-201ENST00000455362 ERCC6Q03468 1493 aa8.27□□□□□ -1.09
HMGB1P4-201ENST00000455362 FGD5Q6ZNL6 1462 aa8.26□□□□□ -1.09
HMGB1P4-201ENST00000455362 MRC2Q9UBG0 1479 aa8.26□□□□□ -1.09
HMGB1P4-201ENST00000455362 RUSC2Q8N2Y8 1516 aa8.26□□□□□ -1.09
HMGB1P4-201ENST00000455362 ARHGEF1Q92888 912 aaKnown RBP8.25□□□□□ -1.09
HMGB1P4-201ENST00000455362 EEA1Q15075 1411 aa8.24□□□□□ -1.09
HMGB1P4-201ENST00000455362 LOC105371045A0A1W2PR82 267 aa8.24□□□□□ -1.09
HMGB1P4-201ENST00000455362 CADPS2Q86UW7 1296 aa8.24□□□□□ -1.09
HMGB1P4-201ENST00000455362 PCDHB8Q9UN66 801 aa8.24□□□□□ -1.09
HMGB1P4-201ENST00000455362 PCDHB13Q9Y5F0 798 aa8.24□□□□□ -1.09
HMGB1P4-201ENST00000455362 POLA1P09884 1462 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P4-201ENST00000455362 RAD54L2Q9Y4B4 1467 aa8.22□□□□□ -1.09
HMGB1P4-201ENST00000455362 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
HMGB1P4-201ENST00000455362 CCDC9Q9Y3X0 531 aaKnown RBP8.22□□□□□ -1.09
HMGB1P4-201ENST00000455362 WDR62O43379 1518 aa8.22□□□□□ -1.09
HMGB1P4-201ENST00000455362 E2F4Q16254 413 aa8.21□□□□□ -1.1
HMGB1P4-201ENST00000455362 THOC2Q8NI27 1593 aaKnown RBP8.21□□□□□ -1.1
HMGB1P4-201ENST00000455362 KIF27Q86VH2 1401 aa8.2□□□□□ -1.1
HMGB1P4-201ENST00000455362 ABCA10Q8WWZ4 1543 aa8.2□□□□□ -1.1
HMGB1P4-201ENST00000455362 ZMYND10O75800 440 aa8.2□□□□□ -1.1
HMGB1P4-201ENST00000455362 PSEN1P49768 467 aa8.2□□□□□ -1.1
HMGB1P4-201ENST00000455362 ASTLQ6HA08 431 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P4-201ENST00000455362 PELP1Q8IZL8 1130 aaKnown RBP8.2□□□□□ -1.1
HMGB1P4-201ENST00000455362 BMP2KQ9NSY1 1161 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P4-201ENST00000455362 CUX2O14529 1486 aa8.19□□□□□ -1.1
HMGB1P4-201ENST00000455362 SMYD5Q6GMV2 418 aa8.19□□□□□ -1.1
HMGB1P4-201ENST00000455362 TARBP1Q13395 1621 aaKnown RBP8.18□□□□□ -1.1
HMGB1P4-201ENST00000455362 TESPA1A2RU30 521 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P4-201ENST00000455362 SEMA3EO15041 775 aa8.18□□□□□ -1.1
HMGB1P4-201ENST00000455362 ATMINO43313 823 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P4-201ENST00000455362 PDIA4P13667 645 aaKnown RBP8.18□□□□□ -1.1
HMGB1P4-201ENST00000455362 NLRP6P59044 892 aa8.18□□□□□ -1.1
HMGB1P4-201ENST00000455362 IL27Q8NEV9 243 aa8.18□□□□□ -1.1
HMGB1P4-201ENST00000455362 MFRPQ9BY79 579 aa8.18□□□□□ -1.1
HMGB1P4-201ENST00000455362 TIE1P35590 1138 aa8.17□□□□□ -1.1
HMGB1P4-201ENST00000455362 LHX8Q68G74 356 aa8.17□□□□□ -1.1
HMGB1P4-201ENST00000455362 IGF1RP08069 1367 aa8.17□□□□□ -1.1
HMGB1P4-201ENST00000455362 WDR97A6NE52 1622 aa8.16□□□□□ -1.1
HMGB1P4-201ENST00000455362 TTLL13PA6NNM8 815 aa8.16□□□□□ -1.1
HMGB1P4-201ENST00000455362 ATN1P54259 1190 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P4-201ENST00000455362 TDRD9Q8NDG6 1382 aaKnown RBP8.16□□□□□ -1.1
HMGB1P4-201ENST00000455362 IFT140Q96RY7 1462 aa8.15□□□□□ -1.1
HMGB1P4-201ENST00000455362 SOX12O15370 315 aa8.15□□□□□ -1.1
HMGB1P4-201ENST00000455362 GPBP1L1Q9HC44 474 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P4-201ENST00000455362 BARGINQ6ZT62 677 aa8.13□□□□□ -1.11
HMGB1P4-201ENST00000455362 AK7Q96M32 723 aa8.13□□□□□ -1.11
HMGB1P4-201ENST00000455362 KIF21BO75037 1637 aa8.13□□□□□ -1.11
HMGB1P4-201ENST00000455362 ABCA5Q8WWZ7 1642 aa8.13□□□□□ -1.11
HMGB1P4-201ENST00000455362 GAPVD1Q14C86 1478 aa8.13□□□□□ -1.11
HMGB1P4-201ENST00000455362 PRXQ9BXM0 1461 aa8.13□□□□□ -1.11
HMGB1P4-201ENST00000455362 APBB1O00213 710 aa8.12□□□□□ -1.11
HMGB1P4-201ENST00000455362 C1orf115Q9H7X2 142 aa8.12□□□□□ -1.11
HMGB1P4-201ENST00000455362 ZNF608Q9ULD9 1512 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P4-201ENST00000455362 AQRO60306 1485 aaKnown RBP eCLIP8.12□□□□□ -1.11
HMGB1P4-201ENST00000455362 CARMIL1Q5VZK9 1371 aa8.11□□□□□ -1.11
HMGB1P4-201ENST00000455362 PDE4AP27815 886 aa8.11□□□□□ -1.11
HMGB1P4-201ENST00000455362 DCBLD2Q96PD2 775 aa8.11□□□□□ -1.11
HMGB1P4-201ENST00000455362 TMEM106CQ9BVX2 250 aa8.11□□□□□ -1.11
HMGB1P4-201ENST00000455362 GOLGA3Q08378 1498 aa8.11□□□□□ -1.11
HMGB1P4-201ENST00000455362 RAPGEF2Q9Y4G8 1499 aa8.11□□□□□ -1.11
HMGB1P4-201ENST00000455362 POTEFA5A3E0 1075 aa8.1□□□□□ -1.11
HMGB1P4-201ENST00000455362 ARID3CA6NKF2 412 aa8.1□□□□□ -1.11
HMGB1P4-201ENST00000455362 EFCAB3Q8N7B9 438 aa8.1□□□□□ -1.11
HMGB1P4-201ENST00000455362 KRI1Q8N9T8 703 aaKnown RBP8.1□□□□□ -1.11
HMGB1P4-201ENST00000455362 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
HMGB1P4-201ENST00000455362 TNIKQ9UKE5 1360 aa8.1□□□□□ -1.11
HMGB1P4-201ENST00000455362 ERICH3Q5RHP9 1530 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms