RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.43
ECHDC1-209ENST00000454591 ADGRL2O95490 1459 aa17.76■□□□□ 0.43
ECHDC1-209ENST00000454591 DDX10Q13206 875 aaKnown RBP17.75■□□□□ 0.43
ECHDC1-209ENST00000454591 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
ECHDC1-209ENST00000454591 CARMIL2Q6F5E8 1435 aa17.73■□□□□ 0.43
ECHDC1-209ENST00000454591 ABCA8O94911 1581 aa17.73■□□□□ 0.43
ECHDC1-209ENST00000454591 RRP7BPQ9NSQ0 103 aa17.72■□□□□ 0.43
ECHDC1-209ENST00000454591 RPRD2Q5VT52 1461 aaKnown RBP17.71■□□□□ 0.43
ECHDC1-209ENST00000454591 MPHOSPH9Q99550 1183 aa17.7■□□□□ 0.42
ECHDC1-209ENST00000454591 ANKRD30BQ9BXX2 1392 aa17.7■□□□□ 0.42
ECHDC1-209ENST00000454591 CAMSAP2Q08AD1 1489 aa17.7■□□□□ 0.42
ECHDC1-209ENST00000454591 GPATCH8Q9UKJ3 1502 aaKnown RBP17.69■□□□□ 0.42
ECHDC1-209ENST00000454591 POLR1AO95602 1720 aaPredicted RBP17.68■□□□□ 0.42
ECHDC1-209ENST00000454591 TEX14Q8IWB6 1497 aa17.68■□□□□ 0.42
ECHDC1-209ENST00000454591 ANP32CO43423 234 aa17.67■□□□□ 0.42
ECHDC1-209ENST00000454591 CHIC2Q9UKJ5 165 aa17.67■□□□□ 0.42
ECHDC1-209ENST00000454591 SUPT16HQ9Y5B9 1047 aaKnown RBP17.67■□□□□ 0.42
ECHDC1-209ENST00000454591 KIF14Q15058 1648 aa17.67■□□□□ 0.42
ECHDC1-209ENST00000454591 PLB1Q6P1J6 1458 aa17.66■□□□□ 0.42
ECHDC1-209ENST00000454591 SHANK2Q9UPX8 1470 aa17.66■□□□□ 0.42
ECHDC1-209ENST00000454591 PRG4Q92954 1404 aaPredicted RBP17.65■□□□□ 0.42
ECHDC1-209ENST00000454591 NCOA1Q15788 1441 aa17.65■□□□□ 0.42
ECHDC1-209ENST00000454591 CDC42BPAQ5VT25 1732 aa17.64■□□□□ 0.41
ECHDC1-209ENST00000454591 ABCC10Q5T3U5 1492 aa17.64■□□□□ 0.41
ECHDC1-209ENST00000454591 PZPP20742 1482 aa17.63■□□□□ 0.41
ECHDC1-209ENST00000454591 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
ECHDC1-209ENST00000454591 KCNH8Q96L42 1107 aa17.63■□□□□ 0.41
ECHDC1-209ENST00000454591 TRIM52Q96A61 297 aa17.62■□□□□ 0.41
ECHDC1-209ENST00000454591 KDM5DQ9BY66 1539 aa17.6■□□□□ 0.41
ECHDC1-209ENST00000454591 JPH4Q96JJ6 628 aa17.6■□□□□ 0.41
ECHDC1-209ENST00000454591 MBD5Q9P267 1494 aa17.59■□□□□ 0.41
ECHDC1-209ENST00000454591 ARHGEF5Q12774 1597 aa17.59■□□□□ 0.41
ECHDC1-209ENST00000454591 ZNF644Q9H582 1327 aaPredicted RBP17.58■□□□□ 0.4
ECHDC1-209ENST00000454591 HSPA5P11021 654 aaKnown RBP17.57■□□□□ 0.4
ECHDC1-209ENST00000454591 EIF4G2P78344 907 aaKnown RBP eCLIP17.57■□□□□ 0.4
ECHDC1-209ENST00000454591 ATP10BO94823 1461 aa17.57■□□□□ 0.4
ECHDC1-209ENST00000454591 L3MBTL2Q969R5 705 aa17.57■□□□□ 0.4
ECHDC1-209ENST00000454591 SPATA31E1Q6ZUB1 1445 aa17.56■□□□□ 0.4
ECHDC1-209ENST00000454591 CNTLNQ9NXG0 1405 aa17.56■□□□□ 0.4
ECHDC1-209ENST00000454591 CFDP1Q9UEE9 299 aaPredicted RBP17.56■□□□□ 0.4
ECHDC1-209ENST00000454591 ANKRD30AQ9BXX3 1397 aa17.55■□□□□ 0.4
ECHDC1-209ENST00000454591 KIAA1107Q9UPP5 1409 aa17.55■□□□□ 0.4
ECHDC1-209ENST00000454591 HIRIP3Q9BW71 556 aaPredicted RBP17.55■□□□□ 0.4
ECHDC1-209ENST00000454591 WASHC2AQ641Q2 1341 aa17.55■□□□□ 0.4
ECHDC1-209ENST00000454591 SHROOM2Q13796 1616 aa17.53■□□□□ 0.4
ECHDC1-209ENST00000454591 ARID3CA6NKF2 412 aa17.52■□□□□ 0.39
ECHDC1-209ENST00000454591 CCDC7Q96M83 1385 aa17.51■□□□□ 0.39
ECHDC1-209ENST00000454591 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
ECHDC1-209ENST00000454591 PTPRGP23470 1445 aa17.5■□□□□ 0.39
ECHDC1-209ENST00000454591 PREX2Q70Z35 1606 aa17.5■□□□□ 0.39
ECHDC1-209ENST00000454591 ANKRD50Q9ULJ7 1429 aa17.49■□□□□ 0.39
ECHDC1-209ENST00000454591 ARHGEF12Q9NZN5 1544 aa17.49■□□□□ 0.39
ECHDC1-209ENST00000454591 PLEKHD1A6NEE1 506 aa17.48■□□□□ 0.39
ECHDC1-209ENST00000454591 UHRF1BP1Q6BDS2 1440 aa17.48■□□□□ 0.39
ECHDC1-209ENST00000454591 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
ECHDC1-209ENST00000454591 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
ECHDC1-209ENST00000454591 NBPF8Q3BBV2 869 aa17.47■□□□□ 0.39
ECHDC1-209ENST00000454591 CDC42BPBQ9Y5S2 1711 aa17.46■□□□□ 0.39
ECHDC1-209ENST00000454591 MSH5O43196 834 aa17.45■□□□□ 0.38
ECHDC1-209ENST00000454591 CHD1O14646 1710 aa17.44■□□□□ 0.38
ECHDC1-209ENST00000454591 SAMD9LQ8IVG5 1584 aa17.43■□□□□ 0.38
ECHDC1-209ENST00000454591 ARID4BQ4LE39 1312 aaPredicted RBP17.43■□□□□ 0.38
ECHDC1-209ENST00000454591 KDM5CP41229 1560 aa17.42■□□□□ 0.38
ECHDC1-209ENST00000454591 RSPH4AQ5TD94 716 aa17.42■□□□□ 0.38
ECHDC1-209ENST00000454591 CCDC141Q6ZP82 1450 aa17.41■□□□□ 0.38
ECHDC1-209ENST00000454591 RALGAPBQ86X10 1494 aa17.41■□□□□ 0.38
ECHDC1-209ENST00000454591 FBLN2P98095 1184 aa17.4■□□□□ 0.38
ECHDC1-209ENST00000454591 MYT1Q01538 1121 aa17.38■□□□□ 0.37
ECHDC1-209ENST00000454591 UNC13BO14795 1591 aa17.38■□□□□ 0.37
ECHDC1-209ENST00000454591 PLXNC1O60486 1568 aa17.37■□□□□ 0.37
ECHDC1-209ENST00000454591 C11orf95C9JLR9 678 aaPredicted RBP17.37■□□□□ 0.37
ECHDC1-209ENST00000454591 PRKRIP1Q9H875 184 aaPredicted RBP17.37■□□□□ 0.37
ECHDC1-209ENST00000454591 KIF7Q2M1P5 1343 aa17.36■□□□□ 0.37
ECHDC1-209ENST00000454591 BCORL1Q5H9F3 1711 aa17.36■□□□□ 0.37
ECHDC1-209ENST00000454591 PKD2Q13563 968 aa17.36■□□□□ 0.37
ECHDC1-209ENST00000454591 PLEKHH2Q8IVE3 1493 aa17.35■□□□□ 0.37
ECHDC1-209ENST00000454591 KIF15Q9NS87 1388 aa17.35■□□□□ 0.37
ECHDC1-209ENST00000454591 ABCC2Q92887 1545 aa17.35■□□□□ 0.37
ECHDC1-209ENST00000454591 NEFLP07196 543 aa17.34■□□□□ 0.37
ECHDC1-209ENST00000454591 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
ECHDC1-209ENST00000454591 MYO5CQ9NQX4 1742 aa17.33■□□□□ 0.37
ECHDC1-209ENST00000454591 TSPY4P0CV99 314 aa17.33■□□□□ 0.37
ECHDC1-209ENST00000454591 TSPY10P0CW01 314 aa17.33■□□□□ 0.37
ECHDC1-209ENST00000454591 FKBP8Q14318 412 aa17.33■□□□□ 0.37
ECHDC1-209ENST00000454591 NUP155O75694 1391 aa17.33■□□□□ 0.36
ECHDC1-209ENST00000454591 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
ECHDC1-209ENST00000454591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
ECHDC1-209ENST00000454591 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
ECHDC1-209ENST00000454591 TTC37Q6PGP7 1564 aa17.31■□□□□ 0.36
ECHDC1-209ENST00000454591 ROCK2O75116 1388 aaKnown RBP17.31■□□□□ 0.36
ECHDC1-209ENST00000454591 USP47Q96K76 1375 aa17.31■□□□□ 0.36
ECHDC1-209ENST00000454591 ERICH6BQ5W0A0 696 aa17.31■□□□□ 0.36
ECHDC1-209ENST00000454591 DHX29Q7Z478 1369 aaKnown RBP17.3■□□□□ 0.36
ECHDC1-209ENST00000454591 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
ECHDC1-209ENST00000454591 LAMC1P11047 1609 aa17.3■□□□□ 0.36
ECHDC1-209ENST00000454591 IQGAP3Q86VI3 1631 aa17.3■□□□□ 0.36
ECHDC1-209ENST00000454591 MAGI2Q86UL8 1455 aa17.29■□□□□ 0.36
ECHDC1-209ENST00000454591 CLASP1Q7Z460 1538 aa17.27■□□□□ 0.36
ECHDC1-209ENST00000454591 SYCP2Q9BX26 1530 aa17.27■□□□□ 0.36
ECHDC1-209ENST00000454591 E9PCH4 1651 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms