RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 HSP90AA1P07900 732 aaKnown RBP13.2□□□□□ -0.3
CSGALNACT1-203ENST00000454498 CC2D2AQ9P2K1 1620 aa13.19□□□□□ -0.3
CSGALNACT1-203ENST00000454498 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
CSGALNACT1-203ENST00000454498 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
CSGALNACT1-203ENST00000454498 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
CSGALNACT1-203ENST00000454498 STK26Q9P289 416 aa13.18□□□□□ -0.3
CSGALNACT1-203ENST00000454498 PHLDB1Q86UU1 1377 aa13.18□□□□□ -0.3
CSGALNACT1-203ENST00000454498 PRXQ9BXM0 1461 aa13.18□□□□□ -0.3
CSGALNACT1-203ENST00000454498 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
CSGALNACT1-203ENST00000454498 ERICH3Q5RHP9 1530 aa13.17□□□□□ -0.3
CSGALNACT1-203ENST00000454498 U2SURPO15042 1029 aaKnown RBP13.17□□□□□ -0.3
CSGALNACT1-203ENST00000454498 CUX1P39880 1505 aa13.16□□□□□ -0.3
CSGALNACT1-203ENST00000454498 ZNF644Q9H582 1327 aaPredicted RBP13.16□□□□□ -0.3
CSGALNACT1-203ENST00000454498 FGD6Q6ZV73 1430 aa13.16□□□□□ -0.3
CSGALNACT1-203ENST00000454498 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
CSGALNACT1-203ENST00000454498 MYH16Q9H6N6 1097 aa13.15□□□□□ -0.3
CSGALNACT1-203ENST00000454498 TOP2BQ02880 1626 aa13.15□□□□□ -0.3
CSGALNACT1-203ENST00000454498 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
CSGALNACT1-203ENST00000454498 LRRC9Q6ZRR7 1453 aa13.15□□□□□ -0.3
CSGALNACT1-203ENST00000454498 OSCARQ8IYS5 282 aa13.15□□□□□ -0.31
CSGALNACT1-203ENST00000454498 WASHC2CQ9Y4E1 1318 aa13.14□□□□□ -0.31
CSGALNACT1-203ENST00000454498 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
CSGALNACT1-203ENST00000454498 MYOM3Q5VTT5 1437 aa13.14□□□□□ -0.31
CSGALNACT1-203ENST00000454498 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
CSGALNACT1-203ENST00000454498 LMOD2Q6P5Q4 547 aa13.13□□□□□ -0.31
CSGALNACT1-203ENST00000454498 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
CSGALNACT1-203ENST00000454498 CASKIN1Q8WXD9 1431 aa13.13□□□□□ -0.31
CSGALNACT1-203ENST00000454498 KTN1Q86UP2 1357 aaKnown RBP13.13□□□□□ -0.31
CSGALNACT1-203ENST00000454498 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
CSGALNACT1-203ENST00000454498 LAS1LQ9Y4W2 734 aaKnown RBP13.12□□□□□ -0.31
CSGALNACT1-203ENST00000454498 FTSJ3Q8IY81 847 aaKnown RBP13.1□□□□□ -0.31
CSGALNACT1-203ENST00000454498 FRAT1Q92837 279 aaPredicted RBP13.1□□□□□ -0.31
CSGALNACT1-203ENST00000454498 CCDC144AA2RUR9 1427 aa13.1□□□□□ -0.31
CSGALNACT1-203ENST00000454498 ST20-MTHFSA0A0A6YYL1 179 aa13.1□□□□□ -0.31
CSGALNACT1-203ENST00000454498 A0A0G2JS52 829 aa13.1□□□□□ -0.31
CSGALNACT1-203ENST00000454498 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
CSGALNACT1-203ENST00000454498 RALBP1Q15311 655 aa13.09□□□□□ -0.31
CSGALNACT1-203ENST00000454498 HAP1P54257 671 aaPredicted RBP13.09□□□□□ -0.31
CSGALNACT1-203ENST00000454498 B4GALNT3Q6L9W6 998 aa13.09□□□□□ -0.31
CSGALNACT1-203ENST00000454498 SOX12O15370 315 aa13.08□□□□□ -0.32
CSGALNACT1-203ENST00000454498 MRC2Q9UBG0 1479 aa13.08□□□□□ -0.32
CSGALNACT1-203ENST00000454498 NCOA2Q15596 1464 aa13.07□□□□□ -0.32
CSGALNACT1-203ENST00000454498 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
CSGALNACT1-203ENST00000454498 HDGFL2Q7Z4V5 671 aaPredicted RBP13.05□□□□□ -0.32
CSGALNACT1-203ENST00000454498 NBR1Q14596 966 aa13.05□□□□□ -0.32
CSGALNACT1-203ENST00000454498 PNNQ9H307 717 aaKnown RBP13.05□□□□□ -0.32
CSGALNACT1-203ENST00000454498 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
CSGALNACT1-203ENST00000454498 EIF3AQ14152 1382 aaKnown RBP13.04□□□□□ -0.32
CSGALNACT1-203ENST00000454498 KIF15Q9NS87 1388 aa13.04□□□□□ -0.32
CSGALNACT1-203ENST00000454498 IFT140Q96RY7 1462 aa13.04□□□□□ -0.32
CSGALNACT1-203ENST00000454498 NLRP13Q86W25 1043 aa13.04□□□□□ -0.32
CSGALNACT1-203ENST00000454498 UACAQ9BZF9 1416 aa13.04□□□□□ -0.32
CSGALNACT1-203ENST00000454498 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
CSGALNACT1-203ENST00000454498 TRAK1Q9UPV9 953 aa13.03□□□□□ -0.32
CSGALNACT1-203ENST00000454498 RGS3P49796 1198 aa13.02□□□□□ -0.32
CSGALNACT1-203ENST00000454498 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
CSGALNACT1-203ENST00000454498 PRDM2Q13029 1718 aa13.02□□□□□ -0.33
CSGALNACT1-203ENST00000454498 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
CSGALNACT1-203ENST00000454498 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
CSGALNACT1-203ENST00000454498 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.33
CSGALNACT1-203ENST00000454498 ANKRD50Q9ULJ7 1429 aa13.01□□□□□ -0.33
CSGALNACT1-203ENST00000454498 USP47Q96K76 1375 aa13□□□□□ -0.33
CSGALNACT1-203ENST00000454498 EFCAB5A4FU69 1503 aa13□□□□□ -0.33
CSGALNACT1-203ENST00000454498 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
CSGALNACT1-203ENST00000454498 MS4A1P11836 297 aa12.99□□□□□ -0.33
CSGALNACT1-203ENST00000454498 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
CSGALNACT1-203ENST00000454498 AFAP1Q8N556 730 aa12.98□□□□□ -0.33
CSGALNACT1-203ENST00000454498 TERF2IPQ9NYB0 399 aa12.98□□□□□ -0.33
CSGALNACT1-203ENST00000454498 PEG3Q9GZU2 1588 aa12.97□□□□□ -0.33
CSGALNACT1-203ENST00000454498 ABCA10Q8WWZ4 1543 aa12.97□□□□□ -0.33
CSGALNACT1-203ENST00000454498 PANK3Q9H999 370 aa12.97□□□□□ -0.33
CSGALNACT1-203ENST00000454498 RCAN3Q9UKA8 241 aa12.97□□□□□ -0.33
CSGALNACT1-203ENST00000454498 VGFO15240 615 aaPredicted RBP12.96□□□□□ -0.33
CSGALNACT1-203ENST00000454498 SNAPC4Q5SXM2 1469 aa12.96□□□□□ -0.33
CSGALNACT1-203ENST00000454498 DDRGK1Q96HY6 314 aa12.96□□□□□ -0.33
CSGALNACT1-203ENST00000454498 SYNJ2O15056 1496 aa12.96□□□□□ -0.33
CSGALNACT1-203ENST00000454498 BECN1Q14457 450 aa12.96□□□□□ -0.34
CSGALNACT1-203ENST00000454498 ARXQ96QS3 562 aa12.95□□□□□ -0.34
CSGALNACT1-203ENST00000454498 ANP32BQ92688 251 aaKnown RBP12.95□□□□□ -0.34
CSGALNACT1-203ENST00000454498 CHMP4BQ9H444 224 aaKnown RBP12.95□□□□□ -0.34
CSGALNACT1-203ENST00000454498 EID1Q9Y6B2 187 aa12.95□□□□□ -0.34
CSGALNACT1-203ENST00000454498 FAM69CQ0P6D2 419 aa12.93□□□□□ -0.34
CSGALNACT1-203ENST00000454498 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
CSGALNACT1-203ENST00000454498 LAMC3Q9Y6N6 1575 aa12.93□□□□□ -0.34
CSGALNACT1-203ENST00000454498 TROQ12816 1431 aaPredicted RBP12.93□□□□□ -0.34
CSGALNACT1-203ENST00000454498 MYBBP1AQ9BQG0 1328 aaKnown RBP12.92□□□□□ -0.34
CSGALNACT1-203ENST00000454498 ERICH6BQ5W0A0 696 aa12.92□□□□□ -0.34
CSGALNACT1-203ENST00000454498 TIAM1Q13009 1591 aa12.92□□□□□ -0.34
CSGALNACT1-203ENST00000454498 PRKCSHP14314 528 aaPredicted RBP12.92□□□□□ -0.34
CSGALNACT1-203ENST00000454498 NUTM2FA1L443 756 aa12.91□□□□□ -0.34
CSGALNACT1-203ENST00000454498 MIA2Q96PC5 1412 aa12.91□□□□□ -0.34
CSGALNACT1-203ENST00000454498 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
CSGALNACT1-203ENST00000454498 CCDC146Q8IYE0 955 aa12.91□□□□□ -0.34
CSGALNACT1-203ENST00000454498 KIAA0586Q9BVV6 1533 aa12.91□□□□□ -0.34
CSGALNACT1-203ENST00000454498 RTF1Q92541 710 aaKnown RBP12.9□□□□□ -0.34
CSGALNACT1-203ENST00000454498 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
CSGALNACT1-203ENST00000454498 PDE3BQ13370 1112 aa12.89□□□□□ -0.35
CSGALNACT1-203ENST00000454498 EHBP1L1Q8N3D4 1523 aa12.89□□□□□ -0.35
CSGALNACT1-203ENST00000454498 ARHGAP5Q13017 1502 aa12.89□□□□□ -0.35
CSGALNACT1-203ENST00000454498 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms