RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 HECW1Q76N89 1606 aa11.79□□□□□ -0.52
CHEK2-220ENST00000454252 PLCH2O75038 1416 aa11.78□□□□□ -0.52
CHEK2-220ENST00000454252 EEA1Q15075 1411 aa11.78□□□□□ -0.52
CHEK2-220ENST00000454252 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
CHEK2-220ENST00000454252 EFCAB5A4FU69 1503 aa11.76□□□□□ -0.53
CHEK2-220ENST00000454252 AFAP1Q8N556 730 aa11.76□□□□□ -0.53
CHEK2-220ENST00000454252 MAGI2Q86UL8 1455 aa11.75□□□□□ -0.53
CHEK2-220ENST00000454252 CFAP74Q9C0B2 1584 aa11.75□□□□□ -0.53
CHEK2-220ENST00000454252 UBTFP17480 764 aaKnown RBP11.74□□□□□ -0.53
CHEK2-220ENST00000454252 ATP10AO60312 1499 aa11.74□□□□□ -0.53
CHEK2-220ENST00000454252 KIF14Q15058 1648 aa11.73□□□□□ -0.53
CHEK2-220ENST00000454252 EFCAB2Q5VUJ9 269 aa11.73□□□□□ -0.53
CHEK2-220ENST00000454252 C9orf84Q5VXU9 1444 aa11.73□□□□□ -0.53
CHEK2-220ENST00000454252 ARHGAP35Q9NRY4 1499 aa11.73□□□□□ -0.53
CHEK2-220ENST00000454252 ARHGEF12Q9NZN5 1544 aa11.73□□□□□ -0.53
CHEK2-220ENST00000454252 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
CHEK2-220ENST00000454252 FER1L4A9Z1Z3 1794 aa11.69□□□□□ -0.54
CHEK2-220ENST00000454252 ARHGAP5Q13017 1502 aa11.69□□□□□ -0.54
CHEK2-220ENST00000454252 TROQ12816 1431 aaPredicted RBP11.69□□□□□ -0.54
CHEK2-220ENST00000454252 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
CHEK2-220ENST00000454252 ILDR2Q71H61 639 aa11.68□□□□□ -0.54
CHEK2-220ENST00000454252 ZNF518AQ6AHZ1 1483 aa11.68□□□□□ -0.54
CHEK2-220ENST00000454252 TRAPPC8Q9Y2L5 1435 aa11.68□□□□□ -0.54
CHEK2-220ENST00000454252 CDK11AQ9UQ88 783 aaPredicted RBP11.66□□□□□ -0.54
CHEK2-220ENST00000454252 KDM5CP41229 1560 aa11.66□□□□□ -0.54
CHEK2-220ENST00000454252 DIP2CQ9Y2E4 1556 aa11.66□□□□□ -0.54
CHEK2-220ENST00000454252 UHRF1BP1Q6BDS2 1440 aa11.65□□□□□ -0.54
CHEK2-220ENST00000454252 DISP3Q9P2K9 1392 aa11.64□□□□□ -0.55
CHEK2-220ENST00000454252 ABCA6Q8N139 1617 aa11.64□□□□□ -0.55
CHEK2-220ENST00000454252 CLIP1P30622 1438 aa11.63□□□□□ -0.55
CHEK2-220ENST00000454252 MYO5CQ9NQX4 1742 aa11.63□□□□□ -0.55
CHEK2-220ENST00000454252 PHF23Q9BUL5 403 aaPredicted RBP11.62□□□□□ -0.55
CHEK2-220ENST00000454252 PREX1Q8TCU6 1659 aa11.62□□□□□ -0.55
CHEK2-220ENST00000454252 STRCQ7RTU9 1775 aa11.62□□□□□ -0.55
CHEK2-220ENST00000454252 MLH3Q9UHC1 1453 aa11.61□□□□□ -0.55
CHEK2-220ENST00000454252 ABCC1P33527 1531 aa11.6□□□□□ -0.55
CHEK2-220ENST00000454252 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
CHEK2-220ENST00000454252 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
CHEK2-220ENST00000454252 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
CHEK2-220ENST00000454252 ESF1Q9H501 851 aaKnown RBP11.58□□□□□ -0.56
CHEK2-220ENST00000454252 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
CHEK2-220ENST00000454252 REREQ9P2R6 1566 aa11.58□□□□□ -0.56
CHEK2-220ENST00000454252 HNRNPMP52272 730 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHEK2-220ENST00000454252 PTPRTO14522 1441 aa11.57□□□□□ -0.56
CHEK2-220ENST00000454252 NCOA1Q15788 1441 aa11.57□□□□□ -0.56
CHEK2-220ENST00000454252 LTBP4Q8N2S1 1624 aa11.57□□□□□ -0.56
CHEK2-220ENST00000454252 AGLP35573 1532 aa11.56□□□□□ -0.56
CHEK2-220ENST00000454252 C3P01024 1663 aa11.56□□□□□ -0.56
CHEK2-220ENST00000454252 CDC42BPBQ9Y5S2 1711 aa11.56□□□□□ -0.56
CHEK2-220ENST00000454252 PREX2Q70Z35 1606 aa11.56□□□□□ -0.56
CHEK2-220ENST00000454252 NCKAP5LQ9HCH0 1330 aa11.56□□□□□ -0.56
CHEK2-220ENST00000454252 ZNF335Q9H4Z2 1342 aaPredicted RBP11.55□□□□□ -0.56
CHEK2-220ENST00000454252 SYCP2Q9BX26 1530 aa11.55□□□□□ -0.56
CHEK2-220ENST00000454252 KIDINS220Q9ULH0 1771 aa11.54□□□□□ -0.56
CHEK2-220ENST00000454252 SAMD9LQ8IVG5 1584 aa11.54□□□□□ -0.56
CHEK2-220ENST00000454252 ZMYM3Q14202 1370 aa11.54□□□□□ -0.56
CHEK2-220ENST00000454252 ITSN2Q9NZM3 1697 aa11.53□□□□□ -0.56
CHEK2-220ENST00000454252 CCDC18Q5T9S5 1454 aa11.53□□□□□ -0.56
CHEK2-220ENST00000454252 SOCS7O14512 581 aa11.53□□□□□ -0.56
CHEK2-220ENST00000454252 GPATCH8Q9UKJ3 1502 aaKnown RBP11.53□□□□□ -0.56
CHEK2-220ENST00000454252 SPAG9O60271 1321 aaKnown RBP11.53□□□□□ -0.56
CHEK2-220ENST00000454252 CAMSAP1Q5T5Y3 1602 aa11.52□□□□□ -0.57
CHEK2-220ENST00000454252 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
CHEK2-220ENST00000454252 ZNF644Q9H582 1327 aaPredicted RBP11.51□□□□□ -0.57
CHEK2-220ENST00000454252 SPATA31D1Q6ZQQ2 1576 aa11.5□□□□□ -0.57
CHEK2-220ENST00000454252 GGT6Q6P531 493 aa11.5□□□□□ -0.57
CHEK2-220ENST00000454252 CFDP1Q9UEE9 299 aaPredicted RBP11.49□□□□□ -0.57
CHEK2-220ENST00000454252 NPATQ14207 1427 aa11.49□□□□□ -0.57
CHEK2-220ENST00000454252 FYCO1Q9BQS8 1478 aa11.49□□□□□ -0.57
CHEK2-220ENST00000454252 CDC42BPAQ5VT25 1732 aa11.49□□□□□ -0.57
CHEK2-220ENST00000454252 UBAP1LF5GYI3 381 aa11.48□□□□□ -0.57
CHEK2-220ENST00000454252 PTPRKQ15262 1439 aa11.48□□□□□ -0.57
CHEK2-220ENST00000454252 ATP7AQ04656 1500 aa11.47□□□□□ -0.57
CHEK2-220ENST00000454252 A2MP01023 1474 aa11.47□□□□□ -0.57
CHEK2-220ENST00000454252 CCNB3Q8WWL7 1395 aa11.47□□□□□ -0.57
CHEK2-220ENST00000454252 PLXNC1O60486 1568 aa11.46□□□□□ -0.57
CHEK2-220ENST00000454252 KIAA1107Q9UPP5 1409 aa11.45□□□□□ -0.58
CHEK2-220ENST00000454252 SUPT6HQ7KZ85 1726 aaKnown RBP11.45□□□□□ -0.58
CHEK2-220ENST00000454252 INO80Q9ULG1 1556 aaPredicted RBP11.45□□□□□ -0.58
CHEK2-220ENST00000454252 CLTCQ00610 1675 aaKnown RBP11.44□□□□□ -0.58
CHEK2-220ENST00000454252 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
CHEK2-220ENST00000454252 MYO3AQ8NEV4 1616 aa11.44□□□□□ -0.58
CHEK2-220ENST00000454252 CEP170BQ9Y4F5 1589 aaPredicted RBP11.44□□□□□ -0.58
CHEK2-220ENST00000454252 TCOF1Q13428 1488 aaKnown RBP11.44□□□□□ -0.58
CHEK2-220ENST00000454252 IQSEC2Q5JU85 1478 aa11.44□□□□□ -0.58
CHEK2-220ENST00000454252 MTUS2Q5JR59 1369 aa11.43□□□□□ -0.58
CHEK2-220ENST00000454252 SETD1BQ9UPS6 1966 aaKnown RBP11.43□□□□□ -0.58
CHEK2-220ENST00000454252 PKD2Q13563 968 aa11.42□□□□□ -0.58
CHEK2-220ENST00000454252 PPP6R1Q9UPN7 881 aa11.42□□□□□ -0.58
CHEK2-220ENST00000454252 PLA2R1Q13018 1463 aa11.42□□□□□ -0.58
CHEK2-220ENST00000454252 MBD5Q9P267 1494 aa11.42□□□□□ -0.58
CHEK2-220ENST00000454252 SCAF1Q9H7N4 1312 aaKnown RBP11.41□□□□□ -0.58
CHEK2-220ENST00000454252 MROH2AA6NES4 1674 aa11.41□□□□□ -0.58
CHEK2-220ENST00000454252 HSPA1LP34931 641 aa11.41□□□□□ -0.58
CHEK2-220ENST00000454252 PIP4K2BP78356 416 aa11.41□□□□□ -0.58
CHEK2-220ENST00000454252 PLEKHH2Q8IVE3 1493 aa11.4□□□□□ -0.58
CHEK2-220ENST00000454252 TIAM1Q13009 1591 aa11.4□□□□□ -0.58
CHEK2-220ENST00000454252 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
CHEK2-220ENST00000454252 KIF3BO15066 747 aa11.38□□□□□ -0.59
CHEK2-220ENST00000454252 ZNF142P52746 1687 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms