RNA–Protein interactions for RNA: ENST00000453213.1

LINC00963-206, long intergenic non-protein coding RNA 963, humanhuman

TSL 3

Gene LINC00963, Length 469 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-206ENST00000453213 STRCQ7RTU9 1775 aa14.7□□□□□ -0.06
LINC00963-206ENST00000453213 RAPGEF6Q8TEU7 1601 aa14.7□□□□□ -0.06
LINC00963-206ENST00000453213 ARHGEF12Q9NZN5 1544 aa14.69□□□□□ -0.06
LINC00963-206ENST00000453213 IQSEC2Q5JU85 1478 aa14.68□□□□□ -0.06
LINC00963-206ENST00000453213 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
LINC00963-206ENST00000453213 HECW1Q76N89 1606 aa14.66□□□□□ -0.06
LINC00963-206ENST00000453213 ATP10AO60312 1499 aa14.66□□□□□ -0.06
LINC00963-206ENST00000453213 NUP153P49790 1475 aaKnown RBP14.66□□□□□ -0.06
LINC00963-206ENST00000453213 C9orf84Q5VXU9 1444 aa14.66□□□□□ -0.06
LINC00963-206ENST00000453213 LTBP4Q8N2S1 1624 aa14.64□□□□□ -0.07
LINC00963-206ENST00000453213 SCAPERQ9BY12 1400 aa14.64□□□□□ -0.07
LINC00963-206ENST00000453213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.63□□□□□ -0.07
LINC00963-206ENST00000453213 UBAP1LF5GYI3 381 aa14.62□□□□□ -0.07
LINC00963-206ENST00000453213 SAMD9Q5K651 1589 aa14.61□□□□□ -0.07
LINC00963-206ENST00000453213 ESF1Q9H501 851 aaKnown RBP14.57□□□□□ -0.08
LINC00963-206ENST00000453213 PLCH2O75038 1416 aa14.57□□□□□ -0.08
LINC00963-206ENST00000453213 NCOA1Q15788 1441 aa14.57□□□□□ -0.08
LINC00963-206ENST00000453213 RANGAP1P46060 587 aaPredicted RBP14.56□□□□□ -0.08
LINC00963-206ENST00000453213 MYT1LQ9UL68 1186 aa14.56□□□□□ -0.08
LINC00963-206ENST00000453213 EFCAB2Q5VUJ9 269 aa14.55□□□□□ -0.08
LINC00963-206ENST00000453213 TRAPPC8Q9Y2L5 1435 aa14.55□□□□□ -0.08
LINC00963-206ENST00000453213 SETD1BQ9UPS6 1966 aaKnown RBP14.54□□□□□ -0.08
LINC00963-206ENST00000453213 ZNF335Q9H4Z2 1342 aaPredicted RBP14.52□□□□□ -0.08
LINC00963-206ENST00000453213 ZNF518AQ6AHZ1 1483 aa14.51□□□□□ -0.09
LINC00963-206ENST00000453213 AFAP1Q8N556 730 aa14.5□□□□□ -0.09
LINC00963-206ENST00000453213 C3P01024 1663 aa14.49□□□□□ -0.09
LINC00963-206ENST00000453213 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
LINC00963-206ENST00000453213 NCKAP5LQ9HCH0 1330 aa14.49□□□□□ -0.09
LINC00963-206ENST00000453213 MED1Q15648 1581 aaPredicted RBP14.49□□□□□ -0.09
LINC00963-206ENST00000453213 HSPA1LP34931 641 aa14.48□□□□□ -0.09
LINC00963-206ENST00000453213 PHF23Q9BUL5 403 aaPredicted RBP14.48□□□□□ -0.09
LINC00963-206ENST00000453213 CAMSAP1Q5T5Y3 1602 aa14.48□□□□□ -0.09
LINC00963-206ENST00000453213 CNTLNQ9NXG0 1405 aa14.46□□□□□ -0.09
LINC00963-206ENST00000453213 REREQ9P2R6 1566 aa14.46□□□□□ -0.09
LINC00963-206ENST00000453213 DIP2CQ9Y2E4 1556 aa14.46□□□□□ -0.09
LINC00963-206ENST00000453213 CDK13Q14004 1512 aaKnown RBP14.46□□□□□ -0.1
LINC00963-206ENST00000453213 KDM5CP41229 1560 aa14.45□□□□□ -0.1
LINC00963-206ENST00000453213 PIP4K2BP78356 416 aa14.45□□□□□ -0.1
LINC00963-206ENST00000453213 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
LINC00963-206ENST00000453213 PKD2Q13563 968 aa14.44□□□□□ -0.1
LINC00963-206ENST00000453213 AGLP35573 1532 aa14.44□□□□□ -0.1
LINC00963-206ENST00000453213 NPATQ14207 1427 aa14.43□□□□□ -0.1
LINC00963-206ENST00000453213 ARHGAP5Q13017 1502 aa14.42□□□□□ -0.1
LINC00963-206ENST00000453213 MYO5CQ9NQX4 1742 aa14.42□□□□□ -0.1
LINC00963-206ENST00000453213 TOM1O60784 492 aa14.42□□□□□ -0.1
LINC00963-206ENST00000453213 CDK11AQ9UQ88 783 aaPredicted RBP14.42□□□□□ -0.1
LINC00963-206ENST00000453213 ATP1B4Q9UN42 357 aaPredicted RBP14.41□□□□□ -0.1
LINC00963-206ENST00000453213 MLH3Q9UHC1 1453 aa14.41□□□□□ -0.1
LINC00963-206ENST00000453213 PPP6R1Q9UPN7 881 aa14.4□□□□□ -0.1
LINC00963-206ENST00000453213 ABCA6Q8N139 1617 aa14.4□□□□□ -0.1
LINC00963-206ENST00000453213 PLA2R1Q13018 1463 aa14.39□□□□□ -0.11
LINC00963-206ENST00000453213 ZMYM3Q14202 1370 aa14.38□□□□□ -0.11
LINC00963-206ENST00000453213 TCOF1Q13428 1488 aaKnown RBP14.36□□□□□ -0.11
LINC00963-206ENST00000453213 KIF14Q15058 1648 aa14.35□□□□□ -0.11
LINC00963-206ENST00000453213 CLIP1P30622 1438 aa14.34□□□□□ -0.11
LINC00963-206ENST00000453213 MROH2AA6NES4 1674 aa14.33□□□□□ -0.11
LINC00963-206ENST00000453213 TROQ12816 1431 aaPredicted RBP14.32□□□□□ -0.12
LINC00963-206ENST00000453213 CPS1P31327 1500 aa14.31□□□□□ -0.12
LINC00963-206ENST00000453213 CEP170BQ9Y4F5 1589 aaPredicted RBP14.31□□□□□ -0.12
LINC00963-206ENST00000453213 MYO3AQ8NEV4 1616 aa14.31□□□□□ -0.12
LINC00963-206ENST00000453213 ZNF142P52746 1687 aaPredicted RBP14.3□□□□□ -0.12
LINC00963-206ENST00000453213 PTPRKQ15262 1439 aa14.3□□□□□ -0.12
LINC00963-206ENST00000453213 FMN1Q68DA7 1419 aa14.29□□□□□ -0.12
LINC00963-206ENST00000453213 ABCC1P33527 1531 aa14.29□□□□□ -0.12
LINC00963-206ENST00000453213 SHANK2Q9UPX8 1470 aa14.28□□□□□ -0.12
LINC00963-206ENST00000453213 SUPT6HQ7KZ85 1726 aaKnown RBP14.27□□□□□ -0.12
LINC00963-206ENST00000453213 SENP3Q9H4L4 574 aaPredicted RBP14.27□□□□□ -0.13
LINC00963-206ENST00000453213 KIDINS220Q9ULH0 1771 aa14.27□□□□□ -0.13
LINC00963-206ENST00000453213 EEA1Q15075 1411 aa14.25□□□□□ -0.13
LINC00963-206ENST00000453213 ITSN2Q9NZM3 1697 aa14.25□□□□□ -0.13
LINC00963-206ENST00000453213 A2ML1A8K2U0 1454 aa14.25□□□□□ -0.13
LINC00963-206ENST00000453213 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
LINC00963-206ENST00000453213 CLTCQ00610 1675 aaKnown RBP14.24□□□□□ -0.13
LINC00963-206ENST00000453213 SPAG9O60271 1321 aaKnown RBP14.24□□□□□ -0.13
LINC00963-206ENST00000453213 GGT6Q6P531 493 aa14.24□□□□□ -0.13
LINC00963-206ENST00000453213 PREX2Q70Z35 1606 aa14.23□□□□□ -0.13
LINC00963-206ENST00000453213 RGS17Q9UGC6 210 aaPredicted RBP14.22□□□□□ -0.13
LINC00963-206ENST00000453213 ZNF777Q9ULD5 760 aaPredicted RBP14.22□□□□□ -0.13
LINC00963-206ENST00000453213 SAMD9LQ8IVG5 1584 aa14.22□□□□□ -0.13
LINC00963-206ENST00000453213 DNMT1P26358 1616 aaKnown RBP14.2□□□□□ -0.14
LINC00963-206ENST00000453213 ANKLE2Q86XL3 938 aa14.2□□□□□ -0.14
LINC00963-206ENST00000453213 A2MP01023 1474 aa14.19□□□□□ -0.14
LINC00963-206ENST00000453213 ALKQ9UM73 1620 aa14.19□□□□□ -0.14
LINC00963-206ENST00000453213 NEURL4Q96JN8 1562 aa14.18□□□□□ -0.14
LINC00963-206ENST00000453213 HNRNPMP52272 730 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC00963-206ENST00000453213 VWDEQ8N2E2 1590 aa14.17□□□□□ -0.14
LINC00963-206ENST00000453213 ATP7AQ04656 1500 aa14.16□□□□□ -0.14
LINC00963-206ENST00000453213 POLR1AO95602 1720 aaPredicted RBP14.16□□□□□ -0.14
LINC00963-206ENST00000453213 UBTFP17480 764 aaKnown RBP14.16□□□□□ -0.14
LINC00963-206ENST00000453213 TNRQ92752 1358 aa14.16□□□□□ -0.14
LINC00963-206ENST00000453213 ARHGAP35Q9NRY4 1499 aa14.16□□□□□ -0.14
LINC00963-206ENST00000453213 PLXNC1O60486 1568 aa14.16□□□□□ -0.14
LINC00963-206ENST00000453213 SYCP2Q9BX26 1530 aa14.15□□□□□ -0.14
LINC00963-206ENST00000453213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC00963-206ENST00000453213 THEMISQ8N1K5 641 aaPredicted RBP14.15□□□□□ -0.14
LINC00963-206ENST00000453213 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
LINC00963-206ENST00000453213 FBXO31Q5XUX0 539 aaPredicted RBP14.13□□□□□ -0.15
LINC00963-206ENST00000453213 POTEAQ6S8J7 498 aa14.13□□□□□ -0.15
LINC00963-206ENST00000453213 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
LINC00963-206ENST00000453213 LRRC7Q96NW7 1537 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms