RNA–Protein interactions for RNA: ENST00000452264.1

SMIM1-202, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

TSL 2

Gene SMIM1, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-202ENST00000452264 HECW1Q76N89 1606 aa27.19■■□□□ 1.94
SMIM1-202ENST00000452264 STRCQ7RTU9 1775 aa27.15■■□□□ 1.94
SMIM1-202ENST00000452264 ARHGEF12Q9NZN5 1544 aa27.15■■□□□ 1.94
SMIM1-202ENST00000452264 SPATA31D1Q6ZQQ2 1576 aa27.14■■□□□ 1.93
SMIM1-202ENST00000452264 DMRT2Q9Y5R5 561 aa27.12■■□□□ 1.93
SMIM1-202ENST00000452264 CEBPAP49715 358 aaPredicted RBP27.1■■□□□ 1.93
SMIM1-202ENST00000452264 SCAPERQ9BY12 1400 aa27.09■■□□□ 1.93
SMIM1-202ENST00000452264 ATP10AO60312 1499 aa27.08■■□□□ 1.93
SMIM1-202ENST00000452264 SETD1BQ9UPS6 1966 aaKnown RBP27.08■■□□□ 1.93
SMIM1-202ENST00000452264 RANGAP1P46060 587 aaPredicted RBP27.08■■□□□ 1.93
SMIM1-202ENST00000452264 C9orf84Q5VXU9 1444 aa27.07■■□□□ 1.92
SMIM1-202ENST00000452264 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
SMIM1-202ENST00000452264 UHRF1BP1Q6BDS2 1440 aa27.03■■□□□ 1.92
SMIM1-202ENST00000452264 PLCH2O75038 1416 aa27.02■■□□□ 1.92
SMIM1-202ENST00000452264 CDK13Q14004 1512 aaKnown RBP26.97■■□□□ 1.91
SMIM1-202ENST00000452264 PTPRTO14522 1441 aa26.97■■□□□ 1.91
SMIM1-202ENST00000452264 MYO5CQ9NQX4 1742 aa26.93■■□□□ 1.9
SMIM1-202ENST00000452264 LTBP4Q8N2S1 1624 aa26.92■■□□□ 1.9
SMIM1-202ENST00000452264 EFCAB2Q5VUJ9 269 aa26.92■■□□□ 1.9
SMIM1-202ENST00000452264 C3P01024 1663 aa26.89■■□□□ 1.89
SMIM1-202ENST00000452264 IQSEC2Q5JU85 1478 aa26.87■■□□□ 1.89
SMIM1-202ENST00000452264 ZNF518AQ6AHZ1 1483 aa26.87■■□□□ 1.89
SMIM1-202ENST00000452264 KDM5CP41229 1560 aa26.86■■□□□ 1.89
SMIM1-202ENST00000452264 DIP2CQ9Y2E4 1556 aa26.84■■□□□ 1.89
SMIM1-202ENST00000452264 AFAP1Q8N556 730 aa26.83■■□□□ 1.89
SMIM1-202ENST00000452264 REREQ9P2R6 1566 aa26.82■■□□□ 1.88
SMIM1-202ENST00000452264 MYT1LQ9UL68 1186 aa26.81■■□□□ 1.88
SMIM1-202ENST00000452264 KIF14Q15058 1648 aa26.8■■□□□ 1.88
SMIM1-202ENST00000452264 NCOA1Q15788 1441 aa26.8■■□□□ 1.88
SMIM1-202ENST00000452264 TRAPPC8Q9Y2L5 1435 aa26.79■■□□□ 1.88
SMIM1-202ENST00000452264 ARHGAP5Q13017 1502 aa26.78■■□□□ 1.88
SMIM1-202ENST00000452264 ABCA6Q8N139 1617 aa26.78■■□□□ 1.88
SMIM1-202ENST00000452264 EEA1Q15075 1411 aa26.76■■□□□ 1.87
SMIM1-202ENST00000452264 ESF1Q9H501 851 aaKnown RBP26.76■■□□□ 1.87
SMIM1-202ENST00000452264 ATP1B4Q9UN42 357 aaPredicted RBP26.75■■□□□ 1.87
SMIM1-202ENST00000452264 CDK11AQ9UQ88 783 aaPredicted RBP26.73■■□□□ 1.87
SMIM1-202ENST00000452264 AGLP35573 1532 aa26.73■■□□□ 1.87
SMIM1-202ENST00000452264 MLH3Q9UHC1 1453 aa26.73■■□□□ 1.87
SMIM1-202ENST00000452264 CAMSAP1Q5T5Y3 1602 aa26.69■■□□□ 1.86
SMIM1-202ENST00000452264 TROQ12816 1431 aaPredicted RBP26.69■■□□□ 1.86
SMIM1-202ENST00000452264 CDC42BPBQ9Y5S2 1711 aa26.68■■□□□ 1.86
SMIM1-202ENST00000452264 CNTLNQ9NXG0 1405 aa26.67■■□□□ 1.86
SMIM1-202ENST00000452264 UBAP1LF5GYI3 381 aa26.67■■□□□ 1.86
SMIM1-202ENST00000452264 FMN1Q68DA7 1419 aa26.66■■□□□ 1.86
SMIM1-202ENST00000452264 ZNF335Q9H4Z2 1342 aaPredicted RBP26.64■■□□□ 1.85
SMIM1-202ENST00000452264 CLIP1P30622 1438 aa26.63■■□□□ 1.85
SMIM1-202ENST00000452264 NPATQ14207 1427 aa26.62■■□□□ 1.85
SMIM1-202ENST00000452264 NCKAP5LQ9HCH0 1330 aa26.62■■□□□ 1.85
SMIM1-202ENST00000452264 KIDINS220Q9ULH0 1771 aa26.61■■□□□ 1.85
SMIM1-202ENST00000452264 ABCC1P33527 1531 aa26.61■■□□□ 1.85
SMIM1-202ENST00000452264 ITSN2Q9NZM3 1697 aa26.61■■□□□ 1.85
SMIM1-202ENST00000452264 MROH2AA6NES4 1674 aa26.6■■□□□ 1.85
SMIM1-202ENST00000452264 PREX2Q70Z35 1606 aa26.57■■□□□ 1.84
SMIM1-202ENST00000452264 LRRIQ1Q96JM4 1722 aa26.57■■□□□ 1.84
SMIM1-202ENST00000452264 ARHGAP35Q9NRY4 1499 aa26.55■■□□□ 1.84
SMIM1-202ENST00000452264 ZMYM3Q14202 1370 aa26.54■■□□□ 1.84
SMIM1-202ENST00000452264 ZNF142P52746 1687 aaPredicted RBP26.52■■□□□ 1.84
SMIM1-202ENST00000452264 PKD2Q13563 968 aa26.52■■□□□ 1.84
SMIM1-202ENST00000452264 SUPT6HQ7KZ85 1726 aaKnown RBP26.52■■□□□ 1.84
SMIM1-202ENST00000452264 PLA2R1Q13018 1463 aa26.51■■□□□ 1.83
SMIM1-202ENST00000452264 MYO3AQ8NEV4 1616 aa26.5■■□□□ 1.83
SMIM1-202ENST00000452264 TCOF1Q13428 1488 aaKnown RBP26.49■■□□□ 1.83
SMIM1-202ENST00000452264 MED1Q15648 1581 aaPredicted RBP26.48■■□□□ 1.83
SMIM1-202ENST00000452264 UBTFP17480 764 aaKnown RBP26.47■■□□□ 1.83
SMIM1-202ENST00000452264 CLTCQ00610 1675 aaKnown RBP26.47■■□□□ 1.83
SMIM1-202ENST00000452264 SAMD9LQ8IVG5 1584 aa26.46■■□□□ 1.83
SMIM1-202ENST00000452264 CEP170BQ9Y4F5 1589 aaPredicted RBP26.46■■□□□ 1.83
SMIM1-202ENST00000452264 CDC42BPAQ5VT25 1732 aa26.46■■□□□ 1.83
SMIM1-202ENST00000452264 EHMT2Q96KQ7 1210 aa26.45■■□□□ 1.82
SMIM1-202ENST00000452264 HSPA1LP34931 641 aa26.44■■□□□ 1.82
SMIM1-202ENST00000452264 PPP6R1Q9UPN7 881 aa26.43■■□□□ 1.82
SMIM1-202ENST00000452264 SCAF1Q9H7N4 1312 aaKnown RBP26.41■■□□□ 1.82
SMIM1-202ENST00000452264 PTPRKQ15262 1439 aa26.41■■□□□ 1.82
SMIM1-202ENST00000452264 SPAG9O60271 1321 aaKnown RBP26.39■■□□□ 1.81
SMIM1-202ENST00000452264 PIP4K2BP78356 416 aa26.38■■□□□ 1.81
SMIM1-202ENST00000452264 SYCP2Q9BX26 1530 aa26.36■■□□□ 1.81
SMIM1-202ENST00000452264 ZNF777Q9ULD5 760 aaPredicted RBP26.36■■□□□ 1.81
SMIM1-202ENST00000452264 PLXNC1O60486 1568 aa26.36■■□□□ 1.81
SMIM1-202ENST00000452264 CCDC18Q5T9S5 1454 aa26.36■■□□□ 1.81
SMIM1-202ENST00000452264 ATP7AQ04656 1500 aa26.34■■□□□ 1.81
SMIM1-202ENST00000452264 TOM1O60784 492 aa26.33■■□□□ 1.81
SMIM1-202ENST00000452264 CHIC1Q5VXU3 224 aa26.33■■□□□ 1.81
SMIM1-202ENST00000452264 A2MP01023 1474 aa26.32■■□□□ 1.8
SMIM1-202ENST00000452264 CPS1P31327 1500 aa26.31■■□□□ 1.8
SMIM1-202ENST00000452264 HNRNPMP52272 730 aaKnown RBP eCLIP26.31■■□□□ 1.8
SMIM1-202ENST00000452264 GGT6Q6P531 493 aa26.31■■□□□ 1.8
SMIM1-202ENST00000452264 DNMT1P26358 1616 aaKnown RBP26.31■■□□□ 1.8
SMIM1-202ENST00000452264 CASKIN1Q8WXD9 1431 aa26.31■■□□□ 1.8
SMIM1-202ENST00000452264 A2ML1A8K2U0 1454 aa26.3■■□□□ 1.8
SMIM1-202ENST00000452264 INO80Q9ULG1 1556 aaPredicted RBP26.3■■□□□ 1.8
SMIM1-202ENST00000452264 POLR1AO95602 1720 aaPredicted RBP26.29■■□□□ 1.8
SMIM1-202ENST00000452264 PHF23Q9BUL5 403 aaPredicted RBP26.28■■□□□ 1.8
SMIM1-202ENST00000452264 GPATCH8Q9UKJ3 1502 aaKnown RBP26.27■■□□□ 1.8
SMIM1-202ENST00000452264 SHANK2Q9UPX8 1470 aa26.26■■□□□ 1.79
SMIM1-202ENST00000452264 NEURL4Q96JN8 1562 aa26.25■■□□□ 1.79
SMIM1-202ENST00000452264 KIAA1107Q9UPP5 1409 aa26.23■■□□□ 1.79
SMIM1-202ENST00000452264 PLEKHH2Q8IVE3 1493 aa26.21■■□□□ 1.79
SMIM1-202ENST00000452264 ADGBQ8N7X0 1667 aa26.21■■□□□ 1.79
SMIM1-202ENST00000452264 ALKQ9UM73 1620 aa26.18■■□□□ 1.78
SMIM1-202ENST00000452264 VWDEQ8N2E2 1590 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms