RNA–Protein interactions for RNA: ENST00000450288.3

PDXDC1-203, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5 BASIC

Gene PDXDC1, Length 4,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-203ENST00000450288 EPRSP07814 1512 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-203ENST00000450288 EIF4G2P78344 907 aaKnown RBP eCLIP11.31□□□□□ -0.6
PDXDC1-203ENST00000450288 WASHC2CQ9Y4E1 1318 aa11.31□□□□□ -0.6
PDXDC1-203ENST00000450288 UACAQ9BZF9 1416 aa11.31□□□□□ -0.6
PDXDC1-203ENST00000450288 EFCAB5A4FU69 1503 aa11.31□□□□□ -0.6
PDXDC1-203ENST00000450288 L3MBTL2Q969R5 705 aa11.3□□□□□ -0.6
PDXDC1-203ENST00000450288 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
PDXDC1-203ENST00000450288 DHX57Q6P158 1386 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-203ENST00000450288 TIAM1Q13009 1591 aa11.29□□□□□ -0.6
PDXDC1-203ENST00000450288 STK26Q9P289 416 aa11.29□□□□□ -0.6
PDXDC1-203ENST00000450288 TMC1Q8TDI8 760 aa11.28□□□□□ -0.6
PDXDC1-203ENST00000450288 FAM9BQ8IZU0 186 aa11.28□□□□□ -0.6
PDXDC1-203ENST00000450288 ARHGAP5Q13017 1502 aa11.28□□□□□ -0.6
PDXDC1-203ENST00000450288 TROQ12816 1431 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-203ENST00000450288 ADAMTS12P58397 1594 aa11.27□□□□□ -0.61
PDXDC1-203ENST00000450288 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.61
PDXDC1-203ENST00000450288 KANK1Q14678 1352 aa11.26□□□□□ -0.61
PDXDC1-203ENST00000450288 KIF15Q9NS87 1388 aa11.26□□□□□ -0.61
PDXDC1-203ENST00000450288 SCAPERQ9BY12 1400 aa11.25□□□□□ -0.61
PDXDC1-203ENST00000450288 C14orf37Q86TY3 774 aa11.24□□□□□ -0.61
PDXDC1-203ENST00000450288 NEFLP07196 543 aa11.24□□□□□ -0.61
PDXDC1-203ENST00000450288 ABCA5Q8WWZ7 1642 aa11.24□□□□□ -0.61
PDXDC1-203ENST00000450288 RSPH4AQ5TD94 716 aa11.24□□□□□ -0.61
PDXDC1-203ENST00000450288 THOC2Q8NI27 1593 aaKnown RBP11.23□□□□□ -0.61
PDXDC1-203ENST00000450288 PBRM1Q86U86 1689 aa11.22□□□□□ -0.61
PDXDC1-203ENST00000450288 HECW1Q76N89 1606 aa11.22□□□□□ -0.61
PDXDC1-203ENST00000450288 SCAF1Q9H7N4 1312 aaKnown RBP11.21□□□□□ -0.61
PDXDC1-203ENST00000450288 HSPA5P11021 654 aaKnown RBP11.21□□□□□ -0.61
PDXDC1-203ENST00000450288 SLC24A1O60721 1099 aa11.21□□□□□ -0.62
PDXDC1-203ENST00000450288 TNNT2P45379 298 aaPredicted RBP11.21□□□□□ -0.62
PDXDC1-203ENST00000450288 ATP10BO94823 1461 aa11.2□□□□□ -0.62
PDXDC1-203ENST00000450288 NUTM2FA1L443 756 aa11.2□□□□□ -0.62
PDXDC1-203ENST00000450288 NUP153P49790 1475 aaKnown RBP11.2□□□□□ -0.62
PDXDC1-203ENST00000450288 ANKRD50Q9ULJ7 1429 aa11.19□□□□□ -0.62
PDXDC1-203ENST00000450288 ZBTB7CA1YPR0 619 aa11.19□□□□□ -0.62
PDXDC1-203ENST00000450288 RRBP1Q9P2E9 1410 aaKnown RBP11.19□□□□□ -0.62
PDXDC1-203ENST00000450288 POGKQ9P215 609 aa11.19□□□□□ -0.62
PDXDC1-203ENST00000450288 DISP1Q96F81 1524 aa11.18□□□□□ -0.62
PDXDC1-203ENST00000450288 CEP170Q5SW79 1584 aa11.18□□□□□ -0.62
PDXDC1-203ENST00000450288 EHBP1L1Q8N3D4 1523 aa11.18□□□□□ -0.62
PDXDC1-203ENST00000450288 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
PDXDC1-203ENST00000450288 HNRNPUQ00839 825 aaKnown RBP eCLIP11.17□□□□□ -0.62
PDXDC1-203ENST00000450288 MRS2Q9HD23 443 aa11.17□□□□□ -0.62
PDXDC1-203ENST00000450288 NUP160Q12769 1436 aa11.16□□□□□ -0.62
PDXDC1-203ENST00000450288 SOX12O15370 315 aa11.16□□□□□ -0.62
PDXDC1-203ENST00000450288 CLSPNQ9HAW4 1339 aa11.16□□□□□ -0.62
PDXDC1-203ENST00000450288 C9orf84Q5VXU9 1444 aa11.15□□□□□ -0.62
PDXDC1-203ENST00000450288 CD109Q6YHK3 1445 aa11.15□□□□□ -0.62
PDXDC1-203ENST00000450288 CC2D1BQ5T0F9 858 aaKnown RBP11.15□□□□□ -0.62
PDXDC1-203ENST00000450288 PPM1GO15355 546 aaPredicted RBP11.15□□□□□ -0.62
PDXDC1-203ENST00000450288 TRAK1Q9UPV9 953 aa11.15□□□□□ -0.62
PDXDC1-203ENST00000450288 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
PDXDC1-203ENST00000450288 BCL11AQ9H165 835 aa11.14□□□□□ -0.63
PDXDC1-203ENST00000450288 KIAA0556O60303 1618 aa11.14□□□□□ -0.63
PDXDC1-203ENST00000450288 SUPT6HQ7KZ85 1726 aaKnown RBP11.14□□□□□ -0.63
PDXDC1-203ENST00000450288 DAPK1P53355 1430 aa11.13□□□□□ -0.63
PDXDC1-203ENST00000450288 PTPRKQ15262 1439 aa11.12□□□□□ -0.63
PDXDC1-203ENST00000450288 CCDC144AA2RUR9 1427 aa11.12□□□□□ -0.63
PDXDC1-203ENST00000450288 RAPGEF6Q8TEU7 1601 aa11.12□□□□□ -0.63
PDXDC1-203ENST00000450288 ROCK2O75116 1388 aaKnown RBP11.12□□□□□ -0.63
PDXDC1-203ENST00000450288 UGGT2Q9NYU1 1516 aa11.12□□□□□ -0.63
PDXDC1-203ENST00000450288 ASXL2Q76L83 1435 aa11.12□□□□□ -0.63
PDXDC1-203ENST00000450288 SRPK2P78362 688 aaKnown RBP11.11□□□□□ -0.63
PDXDC1-203ENST00000450288 ST20-MTHFSA0A0A6YYL1 179 aa11.11□□□□□ -0.63
PDXDC1-203ENST00000450288 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
PDXDC1-203ENST00000450288 GTF3C3Q9Y5Q9 886 aa11.11□□□□□ -0.63
PDXDC1-203ENST00000450288 ABCC5O15440 1437 aa11.1□□□□□ -0.63
PDXDC1-203ENST00000450288 TMEM132EQ6IEE7 984 aa11.1□□□□□ -0.63
PDXDC1-203ENST00000450288 CAMSAP2Q08AD1 1489 aa11.1□□□□□ -0.63
PDXDC1-203ENST00000450288 NAIPQ13075 1403 aa11.1□□□□□ -0.63
PDXDC1-203ENST00000450288 MIA2Q96PC5 1412 aa11.1□□□□□ -0.63
PDXDC1-203ENST00000450288 CEBPAP49715 358 aaPredicted RBP11.09□□□□□ -0.63
PDXDC1-203ENST00000450288 GPATCH8Q9UKJ3 1502 aaKnown RBP11.09□□□□□ -0.63
PDXDC1-203ENST00000450288 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
PDXDC1-203ENST00000450288 PTPN23Q9H3S7 1636 aa11.07□□□□□ -0.64
PDXDC1-203ENST00000450288 CHD1O14646 1710 aa11.07□□□□□ -0.64
PDXDC1-203ENST00000450288 ADGRL1O94910 1474 aa11.07□□□□□ -0.64
PDXDC1-203ENST00000450288 NBPF1Q3BBV0 1214 aa11.06□□□□□ -0.64
PDXDC1-203ENST00000450288 KNSTRNQ9Y448 316 aa11.06□□□□□ -0.64
PDXDC1-203ENST00000450288 FBXO31Q5XUX0 539 aaPredicted RBP11.06□□□□□ -0.64
PDXDC1-203ENST00000450288 FANCAO15360 1455 aa11.06□□□□□ -0.64
PDXDC1-203ENST00000450288 NEUROD2Q15784 382 aa11.06□□□□□ -0.64
PDXDC1-203ENST00000450288 KIF14Q15058 1648 aa11.05□□□□□ -0.64
PDXDC1-203ENST00000450288 HFM1A2PYH4 1435 aa11.05□□□□□ -0.64
PDXDC1-203ENST00000450288 IRX6P78412 446 aaPredicted RBP11.05□□□□□ -0.64
PDXDC1-203ENST00000450288 NBPF8Q3BBV2 869 aa11.05□□□□□ -0.64
PDXDC1-203ENST00000450288 ACIN1Q9UKV3 1341 aaKnown RBP11.05□□□□□ -0.64
PDXDC1-203ENST00000450288 TMF1P82094 1093 aa11.05□□□□□ -0.64
PDXDC1-203ENST00000450288 TIMELESSQ9UNS1 1208 aa11.05□□□□□ -0.64
PDXDC1-203ENST00000450288 CFAP70Q5T0N1 1121 aa11.04□□□□□ -0.64
PDXDC1-203ENST00000450288 MAGI3Q5TCQ9 1506 aa11.04□□□□□ -0.64
PDXDC1-203ENST00000450288 PLEKHH2Q8IVE3 1493 aa11.03□□□□□ -0.64
PDXDC1-203ENST00000450288 NCOA1Q15788 1441 aa11.03□□□□□ -0.64
PDXDC1-203ENST00000450288 MINK1Q8N4C8 1332 aaPredicted RBP11.02□□□□□ -0.64
PDXDC1-203ENST00000450288 TRAPPC8Q9Y2L5 1435 aa11.02□□□□□ -0.64
PDXDC1-203ENST00000450288 CCDC141Q6ZP82 1450 aa11.02□□□□□ -0.65
PDXDC1-203ENST00000450288 A0A0G2JS52 829 aa11.01□□□□□ -0.65
PDXDC1-203ENST00000450288 WDR43Q15061 677 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDXDC1-203ENST00000450288 WDR97A6NE52 1622 aa11.01□□□□□ -0.65
PDXDC1-203ENST00000450288 AKNAQ7Z591 1439 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms