RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 GCC2Q8IWJ2 1684 aa15.62■□□□□ 0.09
SYVN1-204ENST00000449943 MRS2Q9HD23 443 aa15.61■□□□□ 0.09
SYVN1-204ENST00000449943 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
SYVN1-204ENST00000449943 NBPF8Q3BBV2 869 aa15.61■□□□□ 0.09
SYVN1-204ENST00000449943 CNTLNQ9NXG0 1405 aa15.61■□□□□ 0.09
SYVN1-204ENST00000449943 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
SYVN1-204ENST00000449943 ZNF777Q9ULD5 760 aaPredicted RBP15.59■□□□□ 0.09
SYVN1-204ENST00000449943 PBRM1Q86U86 1689 aa15.59■□□□□ 0.09
SYVN1-204ENST00000449943 WDR62O43379 1518 aa15.59■□□□□ 0.09
SYVN1-204ENST00000449943 AKNAQ7Z591 1439 aa15.59■□□□□ 0.09
SYVN1-204ENST00000449943 CCDC7Q96M83 1385 aa15.59■□□□□ 0.09
SYVN1-204ENST00000449943 DAPK1P53355 1430 aa15.58■□□□□ 0.08
SYVN1-204ENST00000449943 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.08
SYVN1-204ENST00000449943 ADAMTS12P58397 1594 aa15.57■□□□□ 0.08
SYVN1-204ENST00000449943 ANKRD30BQ9BXX2 1392 aa15.55■□□□□ 0.08
SYVN1-204ENST00000449943 ABCC5O15440 1437 aa15.55■□□□□ 0.08
SYVN1-204ENST00000449943 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
SYVN1-204ENST00000449943 NCOA1Q15788 1441 aa15.54■□□□□ 0.08
SYVN1-204ENST00000449943 KIF7Q2M1P5 1343 aa15.53■□□□□ 0.08
SYVN1-204ENST00000449943 CFDP1Q9UEE9 299 aaPredicted RBP15.53■□□□□ 0.08
SYVN1-204ENST00000449943 RPRD2Q5VT52 1461 aaKnown RBP15.52■□□□□ 0.08
SYVN1-204ENST00000449943 SENP3-EIF4A1A0A087X0R7 540 aa15.52■□□□□ 0.07
SYVN1-204ENST00000449943 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
SYVN1-204ENST00000449943 ROCK1Q13464 1354 aa15.51■□□□□ 0.07
SYVN1-204ENST00000449943 NUP153P49790 1475 aaKnown RBP15.5■□□□□ 0.07
SYVN1-204ENST00000449943 PRG4Q92954 1404 aaPredicted RBP15.49■□□□□ 0.07
SYVN1-204ENST00000449943 CHMP7Q8WUX9 453 aaPredicted RBP15.49■□□□□ 0.07
SYVN1-204ENST00000449943 TEX14Q8IWB6 1497 aa15.49■□□□□ 0.07
SYVN1-204ENST00000449943 DISP1Q96F81 1524 aa15.48■□□□□ 0.07
SYVN1-204ENST00000449943 B4GALNT3Q6L9W6 998 aa15.48■□□□□ 0.07
SYVN1-204ENST00000449943 PPP4R2Q9NY27 417 aa15.47■□□□□ 0.07
SYVN1-204ENST00000449943 KIAA0556O60303 1618 aa15.47■□□□□ 0.07
SYVN1-204ENST00000449943 DNMT1P26358 1616 aaKnown RBP15.47■□□□□ 0.07
SYVN1-204ENST00000449943 KIAA0586Q9BVV6 1533 aa15.46■□□□□ 0.07
SYVN1-204ENST00000449943 PKD2Q13563 968 aa15.46■□□□□ 0.07
SYVN1-204ENST00000449943 MSH5O43196 834 aa15.45■□□□□ 0.06
SYVN1-204ENST00000449943 ZBED9Q6R2W3 1325 aa15.45■□□□□ 0.06
SYVN1-204ENST00000449943 ERICH6Q7L0X2 663 aa15.44■□□□□ 0.06
SYVN1-204ENST00000449943 CAMSAP2Q08AD1 1489 aa15.43■□□□□ 0.06
SYVN1-204ENST00000449943 RAPGEF6Q8TEU7 1601 aa15.43■□□□□ 0.06
SYVN1-204ENST00000449943 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
SYVN1-204ENST00000449943 PLB1Q6P1J6 1458 aa15.42■□□□□ 0.06
SYVN1-204ENST00000449943 PZPP20742 1482 aa15.42■□□□□ 0.06
SYVN1-204ENST00000449943 SPATA31E1Q6ZUB1 1445 aa15.42■□□□□ 0.06
SYVN1-204ENST00000449943 USP47Q96K76 1375 aa15.42■□□□□ 0.06
SYVN1-204ENST00000449943 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
SYVN1-204ENST00000449943 GRIN2AQ12879 1464 aa15.41■□□□□ 0.06
SYVN1-204ENST00000449943 KDM2AQ9Y2K7 1162 aa15.4■□□□□ 0.06
SYVN1-204ENST00000449943 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
SYVN1-204ENST00000449943 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
SYVN1-204ENST00000449943 GPATCH8Q9UKJ3 1502 aaKnown RBP15.38■□□□□ 0.05
SYVN1-204ENST00000449943 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
SYVN1-204ENST00000449943 ANKRD30AQ9BXX3 1397 aa15.37■□□□□ 0.05
SYVN1-204ENST00000449943 CARD11Q9BXL7 1154 aa15.36■□□□□ 0.05
SYVN1-204ENST00000449943 NUP155O75694 1391 aa15.36■□□□□ 0.05
SYVN1-204ENST00000449943 KIF14Q15058 1648 aa15.36■□□□□ 0.05
SYVN1-204ENST00000449943 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
SYVN1-204ENST00000449943 ANKRD50Q9ULJ7 1429 aa15.35■□□□□ 0.05
SYVN1-204ENST00000449943 PLEKHD1A6NEE1 506 aa15.35■□□□□ 0.05
SYVN1-204ENST00000449943 DHX29Q7Z478 1369 aaKnown RBP15.34■□□□□ 0.05
SYVN1-204ENST00000449943 EIF4G3O43432 1585 aaKnown RBP15.34■□□□□ 0.05
SYVN1-204ENST00000449943 TMC1Q8TDI8 760 aa15.34■□□□□ 0.05
SYVN1-204ENST00000449943 JPH4Q96JJ6 628 aa15.33■□□□□ 0.05
SYVN1-204ENST00000449943 TSPY4P0CV99 314 aa15.31■□□□□ 0.04
SYVN1-204ENST00000449943 TSPY10P0CW01 314 aa15.31■□□□□ 0.04
SYVN1-204ENST00000449943 DCAF11Q8TEB1 546 aa15.31■□□□□ 0.04
SYVN1-204ENST00000449943 HNRNPMP52272 730 aaKnown RBP eCLIP15.31■□□□□ 0.04
SYVN1-204ENST00000449943 NUDCQ9Y266 331 aa15.31■□□□□ 0.04
SYVN1-204ENST00000449943 CARMIL2Q6F5E8 1435 aa15.31■□□□□ 0.04
SYVN1-204ENST00000449943 MBD5Q9P267 1494 aa15.31■□□□□ 0.04
SYVN1-204ENST00000449943 ITSN2Q9NZM3 1697 aa15.3■□□□□ 0.04
SYVN1-204ENST00000449943 BCORL1Q5H9F3 1711 aa15.3■□□□□ 0.04
SYVN1-204ENST00000449943 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
SYVN1-204ENST00000449943 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
SYVN1-204ENST00000449943 SALL2Q9Y467 1007 aaPredicted RBP15.29■□□□□ 0.04
SYVN1-204ENST00000449943 ADGBQ8N7X0 1667 aa15.28■□□□□ 0.04
SYVN1-204ENST00000449943 CCDC136Q96JN2 1154 aa15.28■□□□□ 0.04
SYVN1-204ENST00000449943 C9orf84Q5VXU9 1444 aa15.28■□□□□ 0.04
SYVN1-204ENST00000449943 ADGRL2O95490 1459 aa15.28■□□□□ 0.04
SYVN1-204ENST00000449943 SMG6Q86US8 1419 aaKnown RBP15.28■□□□□ 0.04
SYVN1-204ENST00000449943 NPM1P06748 294 aaKnown RBP eCLIP15.27■□□□□ 0.04
SYVN1-204ENST00000449943 POLR1AO95602 1720 aaPredicted RBP15.26■□□□□ 0.03
SYVN1-204ENST00000449943 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
SYVN1-204ENST00000449943 PNISRQ8TF01 805 aaKnown RBP15.25■□□□□ 0.03
SYVN1-204ENST00000449943 RGL3Q3MIN7 710 aa15.25■□□□□ 0.03
SYVN1-204ENST00000449943 MAGI1Q96QZ7 1491 aaPredicted RBP15.25■□□□□ 0.03
SYVN1-204ENST00000449943 KDM5CP41229 1560 aa15.25■□□□□ 0.03
SYVN1-204ENST00000449943 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
SYVN1-204ENST00000449943 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
SYVN1-204ENST00000449943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.036e-6■□□□□ 11.2
SYVN1-204ENST00000449943 CROCC2H7BZ55 1655 aa15.23■□□□□ 0.03
SYVN1-204ENST00000449943 ROCK2O75116 1388 aaKnown RBP15.23■□□□□ 0.03
SYVN1-204ENST00000449943 ARID4BQ4LE39 1312 aaPredicted RBP15.23■□□□□ 0.03
SYVN1-204ENST00000449943 RALGAPBQ86X10 1494 aa15.23■□□□□ 0.03
SYVN1-204ENST00000449943 ATP10BO94823 1461 aa15.21■□□□□ 0.03
SYVN1-204ENST00000449943 ADCY10Q96PN6 1610 aa15.2■□□□□ 0.02
SYVN1-204ENST00000449943 UHRF1BP1Q6BDS2 1440 aa15.19■□□□□ 0.02
SYVN1-204ENST00000449943 MYBBP1AQ9BQG0 1328 aaKnown RBP15.19■□□□□ 0.02
SYVN1-204ENST00000449943 ABCC10Q5T3U5 1492 aa15.18■□□□□ 0.02
SYVN1-204ENST00000449943 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms