RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 ARHGEF12Q9NZN5 1544 aa23.08■■□□□ 1.28
CPSF7-207ENST00000449811 PLCH2O75038 1416 aa23.08■■□□□ 1.28
CPSF7-207ENST00000449811 CDK13Q14004 1512 aaKnown RBP23.07■■□□□ 1.28
CPSF7-207ENST00000449811 EEA1Q15075 1411 aa23.07■■□□□ 1.28
CPSF7-207ENST00000449811 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
CPSF7-207ENST00000449811 ATP10AO60312 1499 aa23.06■■□□□ 1.28
CPSF7-207ENST00000449811 PREX1Q8TCU6 1659 aa23.04■■□□□ 1.28
CPSF7-207ENST00000449811 CEBPAP49715 358 aaPredicted RBP23.03■■□□□ 1.28
CPSF7-207ENST00000449811 DISP3Q9P2K9 1392 aa23.01■■□□□ 1.27
CPSF7-207ENST00000449811 EFCAB2Q5VUJ9 269 aa23■■□□□ 1.27
CPSF7-207ENST00000449811 DMRT2Q9Y5R5 561 aa23■■□□□ 1.27
CPSF7-207ENST00000449811 ILDR2Q71H61 639 aa22.97■■□□□ 1.27
CPSF7-207ENST00000449811 UHRF1BP1Q6BDS2 1440 aa22.97■■□□□ 1.27
CPSF7-207ENST00000449811 ZNF518AQ6AHZ1 1483 aa22.95■■□□□ 1.26
CPSF7-207ENST00000449811 STRCQ7RTU9 1775 aa22.95■■□□□ 1.26
CPSF7-207ENST00000449811 MYO5CQ9NQX4 1742 aa22.95■■□□□ 1.26
CPSF7-207ENST00000449811 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
CPSF7-207ENST00000449811 SOCS7O14512 581 aa22.93■■□□□ 1.26
CPSF7-207ENST00000449811 CDK11AQ9UQ88 783 aaPredicted RBP22.91■■□□□ 1.26
CPSF7-207ENST00000449811 KDM5CP41229 1560 aa22.9■■□□□ 1.26
CPSF7-207ENST00000449811 AFAP1Q8N556 730 aa22.9■■□□□ 1.26
CPSF7-207ENST00000449811 MYT1LQ9UL68 1186 aa22.9■■□□□ 1.26
CPSF7-207ENST00000449811 FMN1Q68DA7 1419 aa22.9■■□□□ 1.26
CPSF7-207ENST00000449811 ARHGAP5Q13017 1502 aa22.89■■□□□ 1.26
CPSF7-207ENST00000449811 KIF14Q15058 1648 aa22.89■■□□□ 1.25
CPSF7-207ENST00000449811 SETD1BQ9UPS6 1966 aaKnown RBP22.87■■□□□ 1.25
CPSF7-207ENST00000449811 DIP2CQ9Y2E4 1556 aa22.86■■□□□ 1.25
CPSF7-207ENST00000449811 PTPRTO14522 1441 aa22.86■■□□□ 1.25
CPSF7-207ENST00000449811 REREQ9P2R6 1566 aa22.84■■□□□ 1.25
CPSF7-207ENST00000449811 TROQ12816 1431 aaPredicted RBP22.84■■□□□ 1.25
CPSF7-207ENST00000449811 SPATA31D1Q6ZQQ2 1576 aa22.83■■□□□ 1.25
CPSF7-207ENST00000449811 CLIP1P30622 1438 aa22.82■■□□□ 1.24
CPSF7-207ENST00000449811 ESF1Q9H501 851 aaKnown RBP22.82■■□□□ 1.24
CPSF7-207ENST00000449811 C3P01024 1663 aa22.81■■□□□ 1.24
CPSF7-207ENST00000449811 ABCA6Q8N139 1617 aa22.81■■□□□ 1.24
CPSF7-207ENST00000449811 MLH3Q9UHC1 1453 aa22.8■■□□□ 1.24
CPSF7-207ENST00000449811 ARHGAP35Q9NRY4 1499 aa22.79■■□□□ 1.24
CPSF7-207ENST00000449811 UBTFP17480 764 aaKnown RBP22.79■■□□□ 1.24
CPSF7-207ENST00000449811 AGLP35573 1532 aa22.78■■□□□ 1.24
CPSF7-207ENST00000449811 EHMT2Q96KQ7 1210 aa22.78■■□□□ 1.24
CPSF7-207ENST00000449811 TRAPPC8Q9Y2L5 1435 aa22.78■■□□□ 1.24
CPSF7-207ENST00000449811 LTBP4Q8N2S1 1624 aa22.78■■□□□ 1.24
CPSF7-207ENST00000449811 IQSEC2Q5JU85 1478 aa22.75■■□□□ 1.23
CPSF7-207ENST00000449811 NCOA1Q15788 1441 aa22.74■■□□□ 1.23
CPSF7-207ENST00000449811 CDC42BPBQ9Y5S2 1711 aa22.74■■□□□ 1.23
CPSF7-207ENST00000449811 CNTLNQ9NXG0 1405 aa22.73■■□□□ 1.23
CPSF7-207ENST00000449811 ABCC1P33527 1531 aa22.72■■□□□ 1.23
CPSF7-207ENST00000449811 PREX2Q70Z35 1606 aa22.7■■□□□ 1.22
CPSF7-207ENST00000449811 LRRIQ1Q96JM4 1722 aa22.69■■□□□ 1.22
CPSF7-207ENST00000449811 ITSN2Q9NZM3 1697 aa22.69■■□□□ 1.22
CPSF7-207ENST00000449811 CAMSAP1Q5T5Y3 1602 aa22.67■■□□□ 1.22
CPSF7-207ENST00000449811 KIDINS220Q9ULH0 1771 aa22.66■■□□□ 1.22
CPSF7-207ENST00000449811 NPATQ14207 1427 aa22.65■■□□□ 1.22
CPSF7-207ENST00000449811 CCDC18Q5T9S5 1454 aa22.62■■□□□ 1.21
CPSF7-207ENST00000449811 MROH2AA6NES4 1674 aa22.61■■□□□ 1.21
CPSF7-207ENST00000449811 ZMYM3Q14202 1370 aa22.61■■□□□ 1.21
CPSF7-207ENST00000449811 NCKAP5LQ9HCH0 1330 aa22.6■■□□□ 1.21
CPSF7-207ENST00000449811 ZNF335Q9H4Z2 1342 aaPredicted RBP22.59■■□□□ 1.21
CPSF7-207ENST00000449811 SAMD9LQ8IVG5 1584 aa22.59■■□□□ 1.21
CPSF7-207ENST00000449811 CASKIN1Q8WXD9 1431 aa22.58■■□□□ 1.21
CPSF7-207ENST00000449811 CDC42BPAQ5VT25 1732 aa22.58■■□□□ 1.21
CPSF7-207ENST00000449811 UBAP1LF5GYI3 381 aa22.58■■□□□ 1.21
CPSF7-207ENST00000449811 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
CPSF7-207ENST00000449811 SPAG9O60271 1321 aaKnown RBP22.56■■□□□ 1.2
CPSF7-207ENST00000449811 PKD2Q13563 968 aa22.55■■□□□ 1.2
CPSF7-207ENST00000449811 PLA2R1Q13018 1463 aa22.54■■□□□ 1.2
CPSF7-207ENST00000449811 SYCP2Q9BX26 1530 aa22.54■■□□□ 1.2
CPSF7-207ENST00000449811 SUPT6HQ7KZ85 1726 aaKnown RBP22.53■■□□□ 1.2
CPSF7-207ENST00000449811 MYO3AQ8NEV4 1616 aa22.53■■□□□ 1.2
CPSF7-207ENST00000449811 ZNF142P52746 1687 aaPredicted RBP22.52■■□□□ 1.2
CPSF7-207ENST00000449811 CLTCQ00610 1675 aaKnown RBP22.51■■□□□ 1.19
CPSF7-207ENST00000449811 CEP170BQ9Y4F5 1589 aaPredicted RBP22.5■■□□□ 1.19
CPSF7-207ENST00000449811 TCOF1Q13428 1488 aaKnown RBP22.5■■□□□ 1.19
CPSF7-207ENST00000449811 HNRNPMP52272 730 aaKnown RBP eCLIP22.5■■□□□ 1.19
CPSF7-207ENST00000449811 ATP7AQ04656 1500 aa22.5■■□□□ 1.19
CPSF7-207ENST00000449811 PTPRKQ15262 1439 aa22.49■■□□□ 1.19
CPSF7-207ENST00000449811 GPATCH8Q9UKJ3 1502 aaKnown RBP22.48■■□□□ 1.19
CPSF7-207ENST00000449811 PLXNC1O60486 1568 aa22.48■■□□□ 1.19
CPSF7-207ENST00000449811 A2MP01023 1474 aa22.47■■□□□ 1.19
CPSF7-207ENST00000449811 GGT6Q6P531 493 aa22.46■■□□□ 1.19
CPSF7-207ENST00000449811 PPP6R1Q9UPN7 881 aa22.46■■□□□ 1.19
CPSF7-207ENST00000449811 KIAA1107Q9UPP5 1409 aa22.46■■□□□ 1.19
CPSF7-207ENST00000449811 FYCO1Q9BQS8 1478 aa22.46■■□□□ 1.19
CPSF7-207ENST00000449811 INO80Q9ULG1 1556 aaPredicted RBP22.46■■□□□ 1.19
CPSF7-207ENST00000449811 PLEKHH2Q8IVE3 1493 aa22.44■■□□□ 1.18
CPSF7-207ENST00000449811 CFDP1Q9UEE9 299 aaPredicted RBP22.42■■□□□ 1.18
CPSF7-207ENST00000449811 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
CPSF7-207ENST00000449811 A2ML1A8K2U0 1454 aa22.39■■□□□ 1.17
CPSF7-207ENST00000449811 CCNB3Q8WWL7 1395 aa22.38■■□□□ 1.17
CPSF7-207ENST00000449811 HSPA1LP34931 641 aa22.37■■□□□ 1.17
CPSF7-207ENST00000449811 DNMT1P26358 1616 aaKnown RBP22.36■■□□□ 1.17
CPSF7-207ENST00000449811 PIP4K2BP78356 416 aa22.36■■□□□ 1.17
CPSF7-207ENST00000449811 MED1Q15648 1581 aaPredicted RBP22.35■■□□□ 1.17
CPSF7-207ENST00000449811 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
CPSF7-207ENST00000449811 ADGBQ8N7X0 1667 aa22.35■■□□□ 1.17
CPSF7-207ENST00000449811 TOM1O60784 492 aa22.34■■□□□ 1.17
CPSF7-207ENST00000449811 CPS1P31327 1500 aa22.33■■□□□ 1.17
CPSF7-207ENST00000449811 SHANK2Q9UPX8 1470 aa22.3■■□□□ 1.16
CPSF7-207ENST00000449811 MTUS2Q5JR59 1369 aa22.3■■□□□ 1.16
CPSF7-207ENST00000449811 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms