RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 GBP4Q96PP9 640 aa10.46□□□□□ -0.73
LPP-208ENST00000448637 IPO8O15397 1037 aaKnown RBP10.46□□□□□ -0.74
LPP-208ENST00000448637 CALD1Q05682 793 aaKnown RBP10.45□□□□□ -0.74
LPP-208ENST00000448637 HIRIP3Q9BW71 556 aaPredicted RBP10.45□□□□□ -0.74
LPP-208ENST00000448637 CSPP1Q1MSJ5 1256 aa10.45□□□□□ -0.74
LPP-208ENST00000448637 GPATCH3Q96I76 525 aa10.45□□□□□ -0.74
LPP-208ENST00000448637 CFDP1Q9UEE9 299 aaPredicted RBP10.44□□□□□ -0.74
LPP-208ENST00000448637 MARCH6O60337 910 aa10.44□□□□□ -0.74
LPP-208ENST00000448637 CSB-PGBD3P0DP91 1061 aa10.44□□□□□ -0.74
LPP-208ENST00000448637 RBM19Q9Y4C8 960 aaKnown RBP10.44□□□□□ -0.74
LPP-208ENST00000448637 SETQ01105 290 aaPredicted RBP10.44□□□□□ -0.74
LPP-208ENST00000448637 TAF7LQ5H9L4 462 aa10.43□□□□□ -0.74
LPP-208ENST00000448637 KANK1Q14678 1352 aa10.43□□□□□ -0.74
LPP-208ENST00000448637 HSP90B1P14625 803 aaKnown RBP10.42□□□□□ -0.74
LPP-208ENST00000448637 TMF1P82094 1093 aa10.42□□□□□ -0.74
LPP-208ENST00000448637 ZNF330Q9Y3S2 320 aaPredicted RBP10.42□□□□□ -0.74
LPP-208ENST00000448637 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
LPP-208ENST00000448637 MYO15BQ96JP2 1530 aa10.41□□□□□ -0.74
LPP-208ENST00000448637 VPS53Q5VIR6 699 aa10.41□□□□□ -0.74
LPP-208ENST00000448637 SOX12O15370 315 aa10.4□□□□□ -0.74
LPP-208ENST00000448637 MORC1Q86VD1 984 aa10.4□□□□□ -0.74
LPP-208ENST00000448637 HDGFL2Q7Z4V5 671 aaPredicted RBP10.4□□□□□ -0.74
LPP-208ENST00000448637 CCDC9Q9Y3X0 531 aaKnown RBP10.4□□□□□ -0.74
LPP-208ENST00000448637 KIF3AQ9Y496 699 aa10.4□□□□□ -0.74
LPP-208ENST00000448637 TRHP20396 242 aaPredicted RBP10.4□□□□□ -0.75
LPP-208ENST00000448637 CC2D1BQ5T0F9 858 aaKnown RBP10.39□□□□□ -0.75
LPP-208ENST00000448637 TSR1Q2NL82 804 aaKnown RBP10.39□□□□□ -0.75
LPP-208ENST00000448637 CHMP4CQ96CF2 233 aa10.38□□□□□ -0.75
LPP-208ENST00000448637 TPM2P07951 284 aa10.38□□□□□ -0.75
LPP-208ENST00000448637 CNKSR2Q8WXI2 1034 aa10.38□□□□□ -0.75
LPP-208ENST00000448637 CALRP27797 417 aaKnown RBP10.38□□□□□ -0.75
LPP-208ENST00000448637 CREBRFQ8IUR6 639 aa10.37□□□□□ -0.75
LPP-208ENST00000448637 TSHZ2Q9NRE2 1034 aa10.37□□□□□ -0.75
LPP-208ENST00000448637 STK31Q9BXU1 1019 aa10.37□□□□□ -0.75
LPP-208ENST00000448637 CHMP3Q9Y3E7 222 aa10.37□□□□□ -0.75
LPP-208ENST00000448637 CCDC70Q6NSX1 233 aa10.37□□□□□ -0.75
LPP-208ENST00000448637 APBB1O00213 710 aa10.36□□□□□ -0.75
LPP-208ENST00000448637 FRAT2O75474 233 aaPredicted RBP10.36□□□□□ -0.75
LPP-208ENST00000448637 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
LPP-208ENST00000448637 TCEAL9Q9UHQ7 104 aa10.36□□□□□ -0.75
LPP-208ENST00000448637 RWDD1Q9H446 243 aaPredicted RBP10.36□□□□□ -0.75
LPP-208ENST00000448637 SPAG9O60271 1321 aaKnown RBP10.36□□□□□ -0.75
LPP-208ENST00000448637 HMMRO75330 724 aa10.36□□□□□ -0.75
LPP-208ENST00000448637 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
LPP-208ENST00000448637 GTF2E1P29083 439 aaPredicted RBP10.35□□□□□ -0.75
LPP-208ENST00000448637 CTDP1Q9Y5B0 961 aaPredicted RBP10.35□□□□□ -0.75
LPP-208ENST00000448637 PAK3O75914 559 aaPredicted RBP10.35□□□□□ -0.75
LPP-208ENST00000448637 TPD52L1Q16890 204 aaPredicted RBP10.35□□□□□ -0.75
LPP-208ENST00000448637 TOMM22Q9NS69 142 aa10.34□□□□□ -0.75
LPP-208ENST00000448637 PHF14O94880 888 aa10.34□□□□□ -0.75
LPP-208ENST00000448637 TPM1P09493 284 aa10.34□□□□□ -0.75
LPP-208ENST00000448637 SF3A1Q15459 793 aaKnown RBP10.33□□□□□ -0.76
LPP-208ENST00000448637 GPS2Q13227 327 aa10.33□□□□□ -0.76
LPP-208ENST00000448637 TCERG1O14776 1098 aaKnown RBP10.33□□□□□ -0.76
LPP-208ENST00000448637 RRP12Q5JTH9 1297 aaKnown RBP10.33□□□□□ -0.76
LPP-208ENST00000448637 CLIP1P30622 1438 aa10.32□□□□□ -0.76
LPP-208ENST00000448637 MLECQ14165 292 aa10.32□□□□□ -0.76
LPP-208ENST00000448637 PES1O00541 588 aaKnown RBP10.32□□□□□ -0.76
LPP-208ENST00000448637 AKAP17AQ02040 695 aaKnown RBP10.31□□□□□ -0.76
LPP-208ENST00000448637 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
LPP-208ENST00000448637 TRIM34Q9BYJ4 488 aa10.31□□□□□ -0.76
LPP-208ENST00000448637 AMOTL1Q8IY63 956 aa10.31□□□□□ -0.76
LPP-208ENST00000448637 CCDC47Q96A33 483 aaKnown RBP10.31□□□□□ -0.76
LPP-208ENST00000448637 TRIM6-TRIM34B2RNG4 842 aa10.31□□□□□ -0.76
LPP-208ENST00000448637 KIF16BQ96L93 1317 aa10.3□□□□□ -0.76
LPP-208ENST00000448637 ITPRIPQ8IWB1 547 aa10.3□□□□□ -0.76
LPP-208ENST00000448637 WWC1Q8IX03 1113 aa10.3□□□□□ -0.76
LPP-208ENST00000448637 NOL10Q9BSC4 688 aaKnown RBP10.3□□□□□ -0.76
LPP-208ENST00000448637 PMFBP1Q8TBY8 1022 aa10.29□□□□□ -0.76
LPP-208ENST00000448637 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
LPP-208ENST00000448637 FBXO3Q9UK99 471 aa10.29□□□□□ -0.76
LPP-208ENST00000448637 CCER2I3L3R5 266 aa10.29□□□□□ -0.76
LPP-208ENST00000448637 CWC22Q9HCG8 908 aaKnown RBP10.29□□□□□ -0.76
LPP-208ENST00000448637 SYNE3Q6ZMZ3 975 aa10.28□□□□□ -0.76
LPP-208ENST00000448637 GOLGA6L3A6NEY3 463 aa10.28□□□□□ -0.76
LPP-208ENST00000448637 IPO7O95373 1038 aaKnown RBP10.28□□□□□ -0.76
LPP-208ENST00000448637 LRRFIP1Q32MZ4 808 aaKnown RBP10.27□□□□□ -0.76
LPP-208ENST00000448637 ZCCHC6Q5VYS8 1495 aaKnown RBP10.27□□□□□ -0.77
LPP-208ENST00000448637 CDR1P51861 262 aa10.27□□□□□ -0.77
LPP-208ENST00000448637 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.27□□□□□ -0.77
LPP-208ENST00000448637 DCAF11Q8TEB1 546 aa10.27□□□□□ -0.77
LPP-208ENST00000448637 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.27□□□□□ -0.77
LPP-208ENST00000448637 LMOD3Q0VAK6 560 aa10.27□□□□□ -0.77
LPP-208ENST00000448637 SAFB2Q14151 953 aaKnown RBP eCLIP10.27□□□□□ -0.77
LPP-208ENST00000448637 B4GALNT3Q6L9W6 998 aa10.27□□□□□ -0.77
LPP-208ENST00000448637 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
LPP-208ENST00000448637 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
LPP-208ENST00000448637 ANKRD20A12PQ8NF67 263 aa10.26□□□□□ -0.77
LPP-208ENST00000448637 ARID3AQ99856 593 aa10.26□□□□□ -0.77
LPP-208ENST00000448637 PATL2C9JE40 543 aaKnown RBP10.26□□□□□ -0.77
LPP-208ENST00000448637 H3BQV1 296 aa10.26□□□□□ -0.77
LPP-208ENST00000448637 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
LPP-208ENST00000448637 ST18O60284 1047 aa10.26□□□□□ -0.77
LPP-208ENST00000448637 CPLX2Q6PUV4 134 aaKnown RBP10.25□□□□□ -0.77
LPP-208ENST00000448637 ANO8Q9HCE9 1232 aaPredicted RBP10.25□□□□□ -0.77
LPP-208ENST00000448637 KTN1Q86UP2 1357 aaKnown RBP10.25□□□□□ -0.77
LPP-208ENST00000448637 SCRIBQ14160 1630 aa10.25□□□□□ -0.77
LPP-208ENST00000448637 GZF1Q9H116 711 aaPredicted RBP10.25□□□□□ -0.77
LPP-208ENST00000448637 STK26Q9P289 416 aa10.25□□□□□ -0.77
LPP-208ENST00000448637 CCNB3Q8WWL7 1395 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms