RNA–Protein interactions for RNA: ENST00000448136.5

SNHG16-201, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best) BASIC

Gene SNHG16, Length 3,607 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-201ENST00000448136 RNF123Q5XPI4 1314 aa13.59□□□□□ -0.23
SNHG16-201ENST00000448136 RAD54L2Q9Y4B4 1467 aa13.58□□□□□ -0.23
SNHG16-201ENST00000448136 EXOC6Q8TAG9 804 aa13.58□□□□□ -0.23
SNHG16-201ENST00000448136 CASKIN1Q8WXD9 1431 aa13.58□□□□□ -0.24
SNHG16-201ENST00000448136 MAGI3Q5TCQ9 1506 aa13.58□□□□□ -0.24
SNHG16-201ENST00000448136 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
SNHG16-201ENST00000448136 SMG6Q86US8 1419 aaKnown RBP13.57□□□□□ -0.24
SNHG16-201ENST00000448136 MPHOSPH9Q99550 1183 aa13.57□□□□□ -0.24
SNHG16-201ENST00000448136 NUDCQ9Y266 331 aa13.57□□□□□ -0.24
SNHG16-201ENST00000448136 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
SNHG16-201ENST00000448136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.241e-8■■■□□ 15.3
SNHG16-201ENST00000448136 PIAS4Q8N2W9 510 aaPredicted RBP13.57□□□□□ -0.24
SNHG16-201ENST00000448136 FYCO1Q9BQS8 1478 aa13.57□□□□□ -0.24
SNHG16-201ENST00000448136 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
SNHG16-201ENST00000448136 ARXQ96QS3 562 aa13.56□□□□□ -0.24
SNHG16-201ENST00000448136 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
SNHG16-201ENST00000448136 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
SNHG16-201ENST00000448136 UBE2Q2Q8WVN8 375 aa13.54□□□□□ -0.24
SNHG16-201ENST00000448136 BCORL1Q5H9F3 1711 aa13.54□□□□□ -0.24
SNHG16-201ENST00000448136 FMN1Q68DA7 1419 aa13.54□□□□□ -0.24
SNHG16-201ENST00000448136 ZNF326Q5BKZ1 582 aaKnown RBP13.53□□□□□ -0.24
SNHG16-201ENST00000448136 PLIN1O60240 522 aa13.52□□□□□ -0.25
SNHG16-201ENST00000448136 MYOM3Q5VTT5 1437 aa13.51□□□□□ -0.25
SNHG16-201ENST00000448136 PDE4AP27815 886 aa13.51□□□□□ -0.25
SNHG16-201ENST00000448136 PNISRQ8TF01 805 aaKnown RBP13.5□□□□□ -0.25
SNHG16-201ENST00000448136 FRAT1Q92837 279 aaPredicted RBP13.5□□□□□ -0.25
SNHG16-201ENST00000448136 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
SNHG16-201ENST00000448136 TEX14Q8IWB6 1497 aa13.48□□□□□ -0.25
SNHG16-201ENST00000448136 ZNF644Q9H582 1327 aaPredicted RBP13.47□□□□□ -0.25
SNHG16-201ENST00000448136 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
SNHG16-201ENST00000448136 WASHC2CQ9Y4E1 1318 aa13.46□□□□□ -0.25
SNHG16-201ENST00000448136 HECW1Q76N89 1606 aa13.46□□□□□ -0.25
SNHG16-201ENST00000448136 ANKRD30BQ9BXX2 1392 aa13.45□□□□□ -0.26
SNHG16-201ENST00000448136 HMGXB3Q12766 1538 aa13.45□□□□□ -0.26
SNHG16-201ENST00000448136 GSE1Q14687 1217 aa13.44□□□□□ -0.26
SNHG16-201ENST00000448136 RRP1P56182 461 aaKnown RBP13.44□□□□□ -0.26
SNHG16-201ENST00000448136 NFKBIBQ15653 356 aa13.44□□□□□ -0.26
SNHG16-201ENST00000448136 GRIN2BQ13224 1484 aa13.43□□□□□ -0.26
SNHG16-201ENST00000448136 C20orf194Q5TEA3 1177 aa13.42□□□□□ -0.26
SNHG16-201ENST00000448136 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
SNHG16-201ENST00000448136 UGGT2Q9NYU1 1516 aa13.42□□□□□ -0.26
SNHG16-201ENST00000448136 DCAF11Q8TEB1 546 aa13.41□□□□□ -0.26
SNHG16-201ENST00000448136 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
SNHG16-201ENST00000448136 RPRD2Q5VT52 1461 aaKnown RBP13.41□□□□□ -0.26
SNHG16-201ENST00000448136 POLR1AO95602 1720 aaPredicted RBP13.41□□□□□ -0.26
SNHG16-201ENST00000448136 CTTNBP2Q8WZ74 1663 aa13.41□□□□□ -0.26
SNHG16-201ENST00000448136 FRAT2O75474 233 aaPredicted RBP13.4□□□□□ -0.26
SNHG16-201ENST00000448136 SUPT6HQ7KZ85 1726 aaKnown RBP13.39□□□□□ -0.27
SNHG16-201ENST00000448136 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
SNHG16-201ENST00000448136 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
SNHG16-201ENST00000448136 TMC1Q8TDI8 760 aa13.39□□□□□ -0.27
SNHG16-201ENST00000448136 ARID4BQ4LE39 1312 aaPredicted RBP13.38□□□□□ -0.27
SNHG16-201ENST00000448136 CADPSQ9ULU8 1353 aa13.38□□□□□ -0.27
SNHG16-201ENST00000448136 CDK13Q14004 1512 aaKnown RBP13.38□□□□□ -0.27
SNHG16-201ENST00000448136 PRDM2Q13029 1718 aa13.37□□□□□ -0.27
SNHG16-201ENST00000448136 RCAN3Q9UKA8 241 aa13.37□□□□□ -0.27
SNHG16-201ENST00000448136 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
SNHG16-201ENST00000448136 USP47Q96K76 1375 aa13.37□□□□□ -0.27
SNHG16-201ENST00000448136 POLA1P09884 1462 aaPredicted RBP13.37□□□□□ -0.27
SNHG16-201ENST00000448136 DAXXQ9UER7 740 aaPredicted RBP13.37□□□□□ -0.27
SNHG16-201ENST00000448136 CRBNQ96SW2 442 aa13.36□□□□□ -0.27
SNHG16-201ENST00000448136 PPM1GO15355 546 aaPredicted RBP13.35□□□□□ -0.27
SNHG16-201ENST00000448136 LRPPRCP42704 1394 aaKnown RBP13.35□□□□□ -0.27
SNHG16-201ENST00000448136 PKNOX2Q96KN3 472 aa13.34□□□□□ -0.27
SNHG16-201ENST00000448136 TCERG1O14776 1098 aaKnown RBP13.34□□□□□ -0.27
SNHG16-201ENST00000448136 SAMD9Q5K651 1589 aa13.34□□□□□ -0.27
SNHG16-201ENST00000448136 NESP48681 1621 aa13.34□□□□□ -0.27
SNHG16-201ENST00000448136 TCOF1Q13428 1488 aaKnown RBP13.33□□□□□ -0.28
SNHG16-201ENST00000448136 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
SNHG16-201ENST00000448136 ST20-MTHFSA0A0A6YYL1 179 aa13.31□□□□□ -0.28
SNHG16-201ENST00000448136 RGS3P49796 1198 aa13.31□□□□□ -0.28
SNHG16-201ENST00000448136 EHBP1L1Q8N3D4 1523 aa13.31□□□□□ -0.28
SNHG16-201ENST00000448136 ABCA10Q8WWZ4 1543 aa13.31□□□□□ -0.28
SNHG16-201ENST00000448136 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
SNHG16-201ENST00000448136 USP35Q9P2H5 1018 aa13.31□□□□□ -0.28
SNHG16-201ENST00000448136 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
SNHG16-201ENST00000448136 KDM5CP41229 1560 aa13.31□□□□□ -0.28
SNHG16-201ENST00000448136 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
SNHG16-201ENST00000448136 THOC2Q8NI27 1593 aaKnown RBP13.3□□□□□ -0.28
SNHG16-201ENST00000448136 PZPP20742 1482 aa13.3□□□□□ -0.28
SNHG16-201ENST00000448136 MBD5Q9P267 1494 aa13.29□□□□□ -0.28
SNHG16-201ENST00000448136 ABCC5O15440 1437 aa13.29□□□□□ -0.28
SNHG16-201ENST00000448136 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
SNHG16-201ENST00000448136 NCBP3Q53F19 620 aaKnown RBP13.28□□□□□ -0.28
SNHG16-201ENST00000448136 POGKQ9P215 609 aa13.28□□□□□ -0.28
SNHG16-201ENST00000448136 DAPK1P53355 1430 aa13.27□□□□□ -0.28
SNHG16-201ENST00000448136 C8orf34Q49A92 452 aa13.27□□□□□ -0.29
SNHG16-201ENST00000448136 RRAGDQ9NQL2 400 aaPredicted RBP13.26□□□□□ -0.29
SNHG16-201ENST00000448136 SLKQ9H2G2 1235 aaPredicted RBP13.26□□□□□ -0.29
SNHG16-201ENST00000448136 MIA2Q96PC5 1412 aa13.26□□□□□ -0.29
SNHG16-201ENST00000448136 SPRYD3Q8NCJ5 442 aa13.25□□□□□ -0.29
SNHG16-201ENST00000448136 PKD2Q13563 968 aa13.25□□□□□ -0.29
SNHG16-201ENST00000448136 EPRSP07814 1512 aaKnown RBP13.24□□□□□ -0.29
SNHG16-201ENST00000448136 CC2D1BQ5T0F9 858 aaKnown RBP13.24□□□□□ -0.29
SNHG16-201ENST00000448136 CARD11Q9BXL7 1154 aa13.24□□□□□ -0.29
SNHG16-201ENST00000448136 MS4A1P11836 297 aa13.24□□□□□ -0.29
SNHG16-201ENST00000448136 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
SNHG16-201ENST00000448136 GZF1Q9H116 711 aaPredicted RBP13.24□□□□□ -0.29
SNHG16-201ENST00000448136 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
SNHG16-201ENST00000448136 KDM2BQ8NHM5 1336 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms