RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 DENND4BO75064 1496 aaPredicted RBP21.51■■□□□ 1.03
CNOT3-204ENST00000447684 SUPT6HQ7KZ85 1726 aaKnown RBP21.5■■□□□ 1.03
CNOT3-204ENST00000447684 CUL7Q14999 1698 aa21.5■■□□□ 1.03
CNOT3-204ENST00000447684 L3MBTL2Q969R5 705 aa21.48■■□□□ 1.03
CNOT3-204ENST00000447684 UBE2Q2Q8WVN8 375 aa21.48■■□□□ 1.03
CNOT3-204ENST00000447684 USP35Q9P2H5 1018 aa21.48■■□□□ 1.03
CNOT3-204ENST00000447684 FOXD1Q16676 465 aa21.48■■□□□ 1.03
CNOT3-204ENST00000447684 EHBP1L1Q8N3D4 1523 aa21.46■■□□□ 1.03
CNOT3-204ENST00000447684 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
CNOT3-204ENST00000447684 PDE4AP27815 886 aa21.46■■□□□ 1.03
CNOT3-204ENST00000447684 THOC2Q8NI27 1593 aaKnown RBP21.45■■□□□ 1.02
CNOT3-204ENST00000447684 PPM1GO15355 546 aaPredicted RBP21.45■■□□□ 1.02
CNOT3-204ENST00000447684 KIF7Q2M1P5 1343 aa21.44■■□□□ 1.02
CNOT3-204ENST00000447684 SAMD9Q5K651 1589 aa21.43■■□□□ 1.02
CNOT3-204ENST00000447684 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
CNOT3-204ENST00000447684 POLR1AO95602 1720 aaPredicted RBP21.43■■□□□ 1.02
CNOT3-204ENST00000447684 ABCA5Q8WWZ7 1642 aa21.43■■□□□ 1.02
CNOT3-204ENST00000447684 UGGT2Q9NYU1 1516 aa21.43■■□□□ 1.02
CNOT3-204ENST00000447684 RNF123Q5XPI4 1314 aa21.42■■□□□ 1.02
CNOT3-204ENST00000447684 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
CNOT3-204ENST00000447684 EXOC6Q8TAG9 804 aa21.41■■□□□ 1.02
CNOT3-204ENST00000447684 WASHC2CQ9Y4E1 1318 aa21.41■■□□□ 1.02
CNOT3-204ENST00000447684 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
CNOT3-204ENST00000447684 TCERG1O14776 1098 aaKnown RBP21.4■■□□□ 1.02
CNOT3-204ENST00000447684 TCOF1Q13428 1488 aaKnown RBP21.4■■□□□ 1.02
CNOT3-204ENST00000447684 DNMBPQ6XZF7 1577 aa21.38■■□□□ 1.01
CNOT3-204ENST00000447684 KDM6BO15054 1643 aa21.38■■□□□ 1.01
CNOT3-204ENST00000447684 GSE1Q14687 1217 aa21.38■■□□□ 1.01
CNOT3-204ENST00000447684 NBPF8Q3BBV2 869 aa21.36■■□□□ 1.01
CNOT3-204ENST00000447684 BACH2Q9BYV9 841 aa21.36■■□□□ 1.01
CNOT3-204ENST00000447684 TMC1Q8TDI8 760 aa21.35■■□□□ 1.01
CNOT3-204ENST00000447684 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
CNOT3-204ENST00000447684 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
CNOT3-204ENST00000447684 SLC4A3P48751 1232 aa21.34■■□□□ 1.01
CNOT3-204ENST00000447684 MPHOSPH9Q99550 1183 aa21.34■■□□□ 1.01
CNOT3-204ENST00000447684 SPATA31E1Q6ZUB1 1445 aa21.33■■□□□ 1.01
CNOT3-204ENST00000447684 SKAP1Q86WV1 359 aa21.32■■□□□ 1
CNOT3-204ENST00000447684 MAGI3Q5TCQ9 1506 aa21.32■■□□□ 1
CNOT3-204ENST00000447684 RRP1P56182 461 aaKnown RBP21.31■■□□□ 1
CNOT3-204ENST00000447684 DAXXQ9UER7 740 aaPredicted RBP21.31■■□□□ 1
CNOT3-204ENST00000447684 TEX14Q8IWB6 1497 aa21.31■■□□□ 1
CNOT3-204ENST00000447684 ZNF326Q5BKZ1 582 aaKnown RBP21.31■■□□□ 1
CNOT3-204ENST00000447684 FRAT1Q92837 279 aaPredicted RBP21.31■■□□□ 1
CNOT3-204ENST00000447684 RPRD2Q5VT52 1461 aaKnown RBP21.3■■□□□ 1
CNOT3-204ENST00000447684 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
CNOT3-204ENST00000447684 NFKBIBQ15653 356 aa21.3■■□□□ 1
CNOT3-204ENST00000447684 TOPBP1Q92547 1522 aa21.29■■□□□ 1
CNOT3-204ENST00000447684 DDRGK1Q96HY6 314 aa21.26■□□□□ 0.99
CNOT3-204ENST00000447684 ANKRD30BQ9BXX2 1392 aa21.25■□□□□ 0.99
CNOT3-204ENST00000447684 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
CNOT3-204ENST00000447684 RCAN3Q9UKA8 241 aa21.25■□□□□ 0.99
CNOT3-204ENST00000447684 DHX29Q7Z478 1369 aaKnown RBP21.24■□□□□ 0.99
CNOT3-204ENST00000447684 MS4A1P11836 297 aa21.23■□□□□ 0.99
CNOT3-204ENST00000447684 MIA2Q96PC5 1412 aa21.22■□□□□ 0.99
CNOT3-204ENST00000447684 PLIN1O60240 522 aa21.19■□□□□ 0.98
CNOT3-204ENST00000447684 ROCK1Q13464 1354 aa21.14■□□□□ 0.98
CNOT3-204ENST00000447684 BCORL1Q5H9F3 1711 aa21.14■□□□□ 0.97
CNOT3-204ENST00000447684 SLC4A1APQ9BWU0 796 aaKnown RBP21.14■□□□□ 0.97
CNOT3-204ENST00000447684 NESP48681 1621 aa21.13■□□□□ 0.97
CNOT3-204ENST00000447684 FRAT2O75474 233 aaPredicted RBP21.12■□□□□ 0.97
CNOT3-204ENST00000447684 RSPH6AQ9H0K4 717 aa21.12■□□□□ 0.97
CNOT3-204ENST00000447684 EPRSP07814 1512 aaKnown RBP21.12■□□□□ 0.97
CNOT3-204ENST00000447684 ARID3CA6NKF2 412 aa21.11■□□□□ 0.97
CNOT3-204ENST00000447684 MBD5Q9P267 1494 aa21.1■□□□□ 0.97
CNOT3-204ENST00000447684 DAPK1P53355 1430 aa21.1■□□□□ 0.97
CNOT3-204ENST00000447684 CDCA7LQ96GN5 454 aa21.09■□□□□ 0.97
CNOT3-204ENST00000447684 USP47Q96K76 1375 aa21.09■□□□□ 0.97
CNOT3-204ENST00000447684 CRBNQ96SW2 442 aa21.09■□□□□ 0.97
CNOT3-204ENST00000447684 ARID4BQ4LE39 1312 aaPredicted RBP21.08■□□□□ 0.97
CNOT3-204ENST00000447684 DNMT1P26358 1616 aaKnown RBP21.08■□□□□ 0.96
CNOT3-204ENST00000447684 LAMC3Q9Y6N6 1575 aa21.08■□□□□ 0.96
CNOT3-204ENST00000447684 DCAF11Q8TEB1 546 aa21.07■□□□□ 0.96
CNOT3-204ENST00000447684 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
CNOT3-204ENST00000447684 KIF14Q15058 1648 aa21.06■□□□□ 0.96
CNOT3-204ENST00000447684 KDM5CP41229 1560 aa21.06■□□□□ 0.96
CNOT3-204ENST00000447684 CDK13Q14004 1512 aaKnown RBP21.05■□□□□ 0.96
CNOT3-204ENST00000447684 FAM43AQ8N2R8 423 aa21.05■□□□□ 0.96
CNOT3-204ENST00000447684 LRPPRCP42704 1394 aaKnown RBP21.04■□□□□ 0.96
CNOT3-204ENST00000447684 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
CNOT3-204ENST00000447684 ROCK2O75116 1388 aaKnown RBP21.03■□□□□ 0.96
CNOT3-204ENST00000447684 ABCC5O15440 1437 aa21.03■□□□□ 0.96
CNOT3-204ENST00000447684 WDR62O43379 1518 aa21.01■□□□□ 0.95
CNOT3-204ENST00000447684 PZPP20742 1482 aa21.01■□□□□ 0.95
CNOT3-204ENST00000447684 MYBBP1AQ9BQG0 1328 aaKnown RBP21.01■□□□□ 0.95
CNOT3-204ENST00000447684 URB2Q14146 1524 aaKnown RBP21.01■□□□□ 0.95
CNOT3-204ENST00000447684 PKNOX2Q96KN3 472 aa21■□□□□ 0.95
CNOT3-204ENST00000447684 ARXQ96QS3 562 aa21■□□□□ 0.95
CNOT3-204ENST00000447684 KIF15Q9NS87 1388 aa20.99■□□□□ 0.95
CNOT3-204ENST00000447684 RGS3P49796 1198 aa20.98■□□□□ 0.95
CNOT3-204ENST00000447684 BRD4O60885 1362 aaPredicted RBP20.98■□□□□ 0.95
CNOT3-204ENST00000447684 C20orf194Q5TEA3 1177 aa20.97■□□□□ 0.95
CNOT3-204ENST00000447684 KTN1Q86UP2 1357 aaKnown RBP20.96■□□□□ 0.95
CNOT3-204ENST00000447684 PDE3BQ13370 1112 aa20.96■□□□□ 0.95
CNOT3-204ENST00000447684 CARD11Q9BXL7 1154 aa20.96■□□□□ 0.95
CNOT3-204ENST00000447684 IQGAP2Q13576 1575 aa20.94■□□□□ 0.94
CNOT3-204ENST00000447684 RALBP1Q15311 655 aa20.94■□□□□ 0.94
CNOT3-204ENST00000447684 FAM161AQ3B820 660 aa20.94■□□□□ 0.94
CNOT3-204ENST00000447684 KIAA1107Q9UPP5 1409 aa20.94■□□□□ 0.94
CNOT3-204ENST00000447684 RALGAPBQ86X10 1494 aa20.93■□□□□ 0.94
CNOT3-204ENST00000447684 POGKQ9P215 609 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms