RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 TONSLQ96HA7 1378 aa23.35■■□□□ 1.33
OTUB1-204ENST00000447683 ABCC5O15440 1437 aa23.35■■□□□ 1.33
OTUB1-204ENST00000447683 DENND4BO75064 1496 aaPredicted RBP23.34■■□□□ 1.33
OTUB1-204ENST00000447683 KIF14Q15058 1648 aa23.31■■□□□ 1.32
OTUB1-204ENST00000447683 GTF3C3Q9Y5Q9 886 aa23.3■■□□□ 1.32
OTUB1-204ENST00000447683 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
OTUB1-204ENST00000447683 ZNF644Q9H582 1327 aaPredicted RBP23.29■■□□□ 1.32
OTUB1-204ENST00000447683 KDM5BQ9UGL1 1544 aa23.29■■□□□ 1.32
OTUB1-204ENST00000447683 CAMSAP2Q08AD1 1489 aa23.27■■□□□ 1.32
OTUB1-204ENST00000447683 TRIM52Q96A61 297 aa23.25■■□□□ 1.31
OTUB1-204ENST00000447683 ATP10BO94823 1461 aa23.24■■□□□ 1.31
OTUB1-204ENST00000447683 CHD1O14646 1710 aa23.24■■□□□ 1.31
OTUB1-204ENST00000447683 ADGBQ8N7X0 1667 aa23.23■■□□□ 1.31
OTUB1-204ENST00000447683 MPHOSPH9Q99550 1183 aa23.23■■□□□ 1.31
OTUB1-204ENST00000447683 CFDP1Q9UEE9 299 aaPredicted RBP23.22■■□□□ 1.31
OTUB1-204ENST00000447683 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
OTUB1-204ENST00000447683 CDC42BPAQ5VT25 1732 aa23.21■■□□□ 1.31
OTUB1-204ENST00000447683 ABCC10Q5T3U5 1492 aa23.19■■□□□ 1.3
OTUB1-204ENST00000447683 ADGRL2O95490 1459 aa23.18■■□□□ 1.3
OTUB1-204ENST00000447683 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
OTUB1-204ENST00000447683 SHROOM2Q13796 1616 aa23.17■■□□□ 1.3
OTUB1-204ENST00000447683 NCOA1Q15788 1441 aa23.16■■□□□ 1.3
OTUB1-204ENST00000447683 PTPRGP23470 1445 aa23.15■■□□□ 1.3
OTUB1-204ENST00000447683 DDX10Q13206 875 aaKnown RBP23.14■■□□□ 1.29
OTUB1-204ENST00000447683 ANKRD30BQ9BXX2 1392 aa23.12■■□□□ 1.29
OTUB1-204ENST00000447683 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
OTUB1-204ENST00000447683 RPRD2Q5VT52 1461 aaKnown RBP23.08■■□□□ 1.29
OTUB1-204ENST00000447683 SHANK2Q9UPX8 1470 aa23.08■■□□□ 1.29
OTUB1-204ENST00000447683 ZNF777Q9ULD5 760 aaPredicted RBP23.08■■□□□ 1.28
OTUB1-204ENST00000447683 PZPP20742 1482 aa23.07■■□□□ 1.28
OTUB1-204ENST00000447683 ANKRD30AQ9BXX3 1397 aa23.06■■□□□ 1.28
OTUB1-204ENST00000447683 FOXD1Q16676 465 aa23.05■■□□□ 1.28
OTUB1-204ENST00000447683 SLC4A1APQ9BWU0 796 aaKnown RBP23.03■■□□□ 1.28
OTUB1-204ENST00000447683 ARHGEF5Q12774 1597 aa23.02■■□□□ 1.28
OTUB1-204ENST00000447683 L3MBTL2Q969R5 705 aa23.02■■□□□ 1.28
OTUB1-204ENST00000447683 TEX14Q8IWB6 1497 aa23.01■■□□□ 1.27
OTUB1-204ENST00000447683 CDC42BPBQ9Y5S2 1711 aa23■■□□□ 1.27
OTUB1-204ENST00000447683 PREX2Q70Z35 1606 aa23■■□□□ 1.27
OTUB1-204ENST00000447683 C9orf84Q5VXU9 1444 aa22.99■■□□□ 1.27
OTUB1-204ENST00000447683 ANKRD50Q9ULJ7 1429 aa22.99■■□□□ 1.27
OTUB1-204ENST00000447683 KCNH8Q96L42 1107 aa22.97■■□□□ 1.27
OTUB1-204ENST00000447683 ERCC6L2Q5T890 1561 aa22.96■■□□□ 1.27
OTUB1-204ENST00000447683 MBD5Q9P267 1494 aa22.96■■□□□ 1.27
OTUB1-204ENST00000447683 KIAA1107Q9UPP5 1409 aa22.95■■□□□ 1.26
OTUB1-204ENST00000447683 ABCC2Q92887 1545 aa22.95■■□□□ 1.26
OTUB1-204ENST00000447683 SAMD9LQ8IVG5 1584 aa22.95■■□□□ 1.26
OTUB1-204ENST00000447683 CCER2I3L3R5 266 aa22.94■■□□□ 1.26
OTUB1-204ENST00000447683 HSPA5P11021 654 aaKnown RBP22.93■■□□□ 1.26
OTUB1-204ENST00000447683 CLASP1Q7Z460 1538 aa22.93■■□□□ 1.26
OTUB1-204ENST00000447683 KDM5DQ9BY66 1539 aa22.92■■□□□ 1.26
OTUB1-204ENST00000447683 ANP32CO43423 234 aa22.91■■□□□ 1.26
OTUB1-204ENST00000447683 TSPY4P0CV99 314 aa22.91■■□□□ 1.26
OTUB1-204ENST00000447683 TSPY10P0CW01 314 aa22.91■■□□□ 1.26
OTUB1-204ENST00000447683 EIF4G2P78344 907 aaKnown RBP eCLIP22.91■■□□□ 1.26
OTUB1-204ENST00000447683 CCDC141Q6ZP82 1450 aa22.9■■□□□ 1.26
OTUB1-204ENST00000447683 TTC37Q6PGP7 1564 aa22.89■■□□□ 1.25
OTUB1-204ENST00000447683 HNRNPMP52272 730 aaKnown RBP eCLIP22.88■■□□□ 1.25
OTUB1-204ENST00000447683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.88■■□□□ 1.25
OTUB1-204ENST00000447683 NBPF8Q3BBV2 869 aa22.88■■□□□ 1.25
OTUB1-204ENST00000447683 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
OTUB1-204ENST00000447683 WASHC2AQ641Q2 1341 aa22.86■■□□□ 1.25
OTUB1-204ENST00000447683 KIF15Q9NS87 1388 aa22.86■■□□□ 1.25
OTUB1-204ENST00000447683 PKD2Q13563 968 aa22.86■■□□□ 1.25
OTUB1-204ENST00000447683 MYO5CQ9NQX4 1742 aa22.85■■□□□ 1.25
OTUB1-204ENST00000447683 MAST1Q9Y2H9 1570 aa22.84■■□□□ 1.25
OTUB1-204ENST00000447683 UHRF1BP1LA0JNW5 1464 aa22.83■■□□□ 1.25
OTUB1-204ENST00000447683 NUP155O75694 1391 aa22.83■■□□□ 1.25
OTUB1-204ENST00000447683 ARHGAP5Q13017 1502 aa22.81■■□□□ 1.24
OTUB1-204ENST00000447683 POLR1AO95602 1720 aaPredicted RBP22.81■■□□□ 1.24
OTUB1-204ENST00000447683 SPATA31E1Q6ZUB1 1445 aa22.81■■□□□ 1.24
OTUB1-204ENST00000447683 SYCP2Q9BX26 1530 aa22.81■■□□□ 1.24
OTUB1-204ENST00000447683 ZCCHC11Q5TAX3 1644 aaKnown RBP22.8■■□□□ 1.24
OTUB1-204ENST00000447683 BCL11AQ9H165 835 aa22.8■■□□□ 1.24
OTUB1-204ENST00000447683 PLEKHH2Q8IVE3 1493 aa22.78■■□□□ 1.24
OTUB1-204ENST00000447683 CCDC7Q96M83 1385 aa22.76■■□□□ 1.23
OTUB1-204ENST00000447683 PLXNC1O60486 1568 aa22.75■■□□□ 1.23
OTUB1-204ENST00000447683 CNTLNQ9NXG0 1405 aa22.75■■□□□ 1.23
OTUB1-204ENST00000447683 ARHGEF12Q9NZN5 1544 aa22.73■■□□□ 1.23
OTUB1-204ENST00000447683 C11orf95C9JLR9 678 aaPredicted RBP22.73■■□□□ 1.23
OTUB1-204ENST00000447683 UHRF1BP1Q6BDS2 1440 aa22.72■■□□□ 1.23
OTUB1-204ENST00000447683 UNC13BO14795 1591 aa22.72■■□□□ 1.23
OTUB1-204ENST00000447683 FAM135AQ9P2D6 1515 aa22.72■■□□□ 1.23
OTUB1-204ENST00000447683 PLCH2O75038 1416 aa22.71■■□□□ 1.23
OTUB1-204ENST00000447683 ERICH6Q7L0X2 663 aa22.69■■□□□ 1.22
OTUB1-204ENST00000447683 RALGAPBQ86X10 1494 aa22.65■■□□□ 1.22
OTUB1-204ENST00000447683 KDM5CP41229 1560 aa22.65■■□□□ 1.22
OTUB1-204ENST00000447683 KIF7Q2M1P5 1343 aa22.64■■□□□ 1.22
OTUB1-204ENST00000447683 SUPT16HQ9Y5B9 1047 aaKnown RBP22.64■■□□□ 1.22
OTUB1-204ENST00000447683 ABCC1P33527 1531 aa22.64■■□□□ 1.21
OTUB1-204ENST00000447683 DUOX2Q9NRD8 1548 aa22.64■■□□□ 1.21
OTUB1-204ENST00000447683 IQGAP3Q86VI3 1631 aa22.63■■□□□ 1.21
OTUB1-204ENST00000447683 ARAP3Q8WWN8 1544 aa22.63■■□□□ 1.21
OTUB1-204ENST00000447683 EFCAB2Q5VUJ9 269 aa22.62■■□□□ 1.21
OTUB1-204ENST00000447683 USP47Q96K76 1375 aa22.62■■□□□ 1.21
OTUB1-204ENST00000447683 PRKCSHP14314 528 aaPredicted RBP22.61■■□□□ 1.21
OTUB1-204ENST00000447683 BCORL1Q5H9F3 1711 aa22.61■■□□□ 1.21
OTUB1-204ENST00000447683 MAGI2Q86UL8 1455 aa22.6■■□□□ 1.21
OTUB1-204ENST00000447683 ERBINQ96RT1 1412 aa22.59■■□□□ 1.21
OTUB1-204ENST00000447683 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
OTUB1-204ENST00000447683 PRKRIP1Q9H875 184 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms