RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 NUP153P49790 1475 aaKnown RBP20.78■□□□□ 0.92
SSR4-205ENST00000447375 CFAP74Q9C0B2 1584 aa20.77■□□□□ 0.92
SSR4-205ENST00000447375 STRCQ7RTU9 1775 aa20.77■□□□□ 0.91
SSR4-205ENST00000447375 HECW1Q76N89 1606 aa20.75■□□□□ 0.91
SSR4-205ENST00000447375 ARHGEF12Q9NZN5 1544 aa20.74■□□□□ 0.91
SSR4-205ENST00000447375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.73■□□□□ 0.91
SSR4-205ENST00000447375 SAMD9Q5K651 1589 aa20.73■□□□□ 0.91
SSR4-205ENST00000447375 UHRF1BP1Q6BDS2 1440 aa20.73■□□□□ 0.91
SSR4-205ENST00000447375 ATP10AO60312 1499 aa20.73■□□□□ 0.91
SSR4-205ENST00000447375 PTPRTO14522 1441 aa20.72■□□□□ 0.91
SSR4-205ENST00000447375 CSRNP3Q8WYN3 585 aa20.72■□□□□ 0.91
SSR4-205ENST00000447375 SCAPERQ9BY12 1400 aa20.71■□□□□ 0.91
SSR4-205ENST00000447375 EEA1Q15075 1411 aa20.7■□□□□ 0.9
SSR4-205ENST00000447375 C9orf84Q5VXU9 1444 aa20.7■□□□□ 0.9
SSR4-205ENST00000447375 RANGAP1P46060 587 aaPredicted RBP20.67■□□□□ 0.9
SSR4-205ENST00000447375 LTBP4Q8N2S1 1624 aa20.66■□□□□ 0.9
SSR4-205ENST00000447375 IQSEC2Q5JU85 1478 aa20.64■□□□□ 0.89
SSR4-205ENST00000447375 PLCH2O75038 1416 aa20.64■□□□□ 0.89
SSR4-205ENST00000447375 SETD1BQ9UPS6 1966 aaKnown RBP20.62■□□□□ 0.89
SSR4-205ENST00000447375 EFCAB2Q5VUJ9 269 aa20.6■□□□□ 0.89
SSR4-205ENST00000447375 UBAP1LF5GYI3 381 aa20.57■□□□□ 0.88
SSR4-205ENST00000447375 MYT1LQ9UL68 1186 aa20.57■□□□□ 0.88
SSR4-205ENST00000447375 ESF1Q9H501 851 aaKnown RBP20.56■□□□□ 0.88
SSR4-205ENST00000447375 AFAP1Q8N556 730 aa20.55■□□□□ 0.88
SSR4-205ENST00000447375 TRAPPC8Q9Y2L5 1435 aa20.54■□□□□ 0.88
SSR4-205ENST00000447375 NCOA1Q15788 1441 aa20.53■□□□□ 0.88
SSR4-205ENST00000447375 ZNF518AQ6AHZ1 1483 aa20.51■□□□□ 0.87
SSR4-205ENST00000447375 C3P01024 1663 aa20.5■□□□□ 0.87
SSR4-205ENST00000447375 CDK13Q14004 1512 aaKnown RBP20.49■□□□□ 0.87
SSR4-205ENST00000447375 ZNF335Q9H4Z2 1342 aaPredicted RBP20.48■□□□□ 0.87
SSR4-205ENST00000447375 NCKAP5LQ9HCH0 1330 aa20.46■□□□□ 0.87
SSR4-205ENST00000447375 KDM5CP41229 1560 aa20.44■□□□□ 0.86
SSR4-205ENST00000447375 DIP2CQ9Y2E4 1556 aa20.44■□□□□ 0.86
SSR4-205ENST00000447375 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
SSR4-205ENST00000447375 CAMSAP1Q5T5Y3 1602 aa20.44■□□□□ 0.86
SSR4-205ENST00000447375 REREQ9P2R6 1566 aa20.43■□□□□ 0.86
SSR4-205ENST00000447375 MYO5CQ9NQX4 1742 aa20.43■□□□□ 0.86
SSR4-205ENST00000447375 CDK11AQ9UQ88 783 aaPredicted RBP20.42■□□□□ 0.86
SSR4-205ENST00000447375 CNTLNQ9NXG0 1405 aa20.41■□□□□ 0.86
SSR4-205ENST00000447375 AGLP35573 1532 aa20.41■□□□□ 0.86
SSR4-205ENST00000447375 HSPA1LP34931 641 aa20.4■□□□□ 0.86
SSR4-205ENST00000447375 ARHGAP5Q13017 1502 aa20.4■□□□□ 0.86
SSR4-205ENST00000447375 MLH3Q9UHC1 1453 aa20.39■□□□□ 0.85
SSR4-205ENST00000447375 PKD2Q13563 968 aa20.38■□□□□ 0.85
SSR4-205ENST00000447375 ABCA6Q8N139 1617 aa20.38■□□□□ 0.85
SSR4-205ENST00000447375 NPATQ14207 1427 aa20.37■□□□□ 0.85
SSR4-205ENST00000447375 SCAF1Q9H7N4 1312 aaKnown RBP20.37■□□□□ 0.85
SSR4-205ENST00000447375 MED1Q15648 1581 aaPredicted RBP20.35■□□□□ 0.85
SSR4-205ENST00000447375 PIP4K2BP78356 416 aa20.35■□□□□ 0.85
SSR4-205ENST00000447375 KIF14Q15058 1648 aa20.35■□□□□ 0.85
SSR4-205ENST00000447375 ZMYM3Q14202 1370 aa20.34■□□□□ 0.85
SSR4-205ENST00000447375 UBTFP17480 764 aaKnown RBP20.32■□□□□ 0.84
SSR4-205ENST00000447375 PHF23Q9BUL5 403 aaPredicted RBP20.32■□□□□ 0.84
SSR4-205ENST00000447375 TROQ12816 1431 aaPredicted RBP20.3■□□□□ 0.84
SSR4-205ENST00000447375 TOM1O60784 492 aa20.3■□□□□ 0.84
SSR4-205ENST00000447375 EHMT2Q96KQ7 1210 aa20.3■□□□□ 0.84
SSR4-205ENST00000447375 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
SSR4-205ENST00000447375 PLA2R1Q13018 1463 aa20.3■□□□□ 0.84
SSR4-205ENST00000447375 CLIP1P30622 1438 aa20.27■□□□□ 0.84
SSR4-205ENST00000447375 FMN1Q68DA7 1419 aa20.27■□□□□ 0.84
SSR4-205ENST00000447375 TCOF1Q13428 1488 aaKnown RBP20.27■□□□□ 0.84
SSR4-205ENST00000447375 LRRIQ1Q96JM4 1722 aa20.25■□□□□ 0.83
SSR4-205ENST00000447375 MROH2AA6NES4 1674 aa20.25■□□□□ 0.83
SSR4-205ENST00000447375 ABCC1P33527 1531 aa20.23■□□□□ 0.83
SSR4-205ENST00000447375 CDC42BPBQ9Y5S2 1711 aa20.23■□□□□ 0.83
SSR4-205ENST00000447375 KIDINS220Q9ULH0 1771 aa20.23■□□□□ 0.83
SSR4-205ENST00000447375 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
SSR4-205ENST00000447375 MYO3AQ8NEV4 1616 aa20.2■□□□□ 0.82
SSR4-205ENST00000447375 ZNF142P52746 1687 aaPredicted RBP20.19■□□□□ 0.82
SSR4-205ENST00000447375 ITSN2Q9NZM3 1697 aa20.19■□□□□ 0.82
SSR4-205ENST00000447375 PTPRKQ15262 1439 aa20.19■□□□□ 0.82
SSR4-205ENST00000447375 SUPT6HQ7KZ85 1726 aaKnown RBP20.19■□□□□ 0.82
SSR4-205ENST00000447375 ARHGAP35Q9NRY4 1499 aa20.17■□□□□ 0.82
SSR4-205ENST00000447375 CPS1P31327 1500 aa20.17■□□□□ 0.82
SSR4-205ENST00000447375 GGT6Q6P531 493 aa20.16■□□□□ 0.82
SSR4-205ENST00000447375 SPAG9O60271 1321 aaKnown RBP20.16■□□□□ 0.82
SSR4-205ENST00000447375 PREX2Q70Z35 1606 aa20.16■□□□□ 0.82
SSR4-205ENST00000447375 CLTCQ00610 1675 aaKnown RBP20.16■□□□□ 0.82
SSR4-205ENST00000447375 ZNF777Q9ULD5 760 aaPredicted RBP20.15■□□□□ 0.82
SSR4-205ENST00000447375 SHANK2Q9UPX8 1470 aa20.14■□□□□ 0.81
SSR4-205ENST00000447375 SAMD9LQ8IVG5 1584 aa20.13■□□□□ 0.81
SSR4-205ENST00000447375 A2ML1A8K2U0 1454 aa20.11■□□□□ 0.81
SSR4-205ENST00000447375 HNRNPMP52272 730 aaKnown RBP eCLIP20.11■□□□□ 0.81
SSR4-205ENST00000447375 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
SSR4-205ENST00000447375 DNMT1P26358 1616 aaKnown RBP20.09■□□□□ 0.81
SSR4-205ENST00000447375 A2MP01023 1474 aa20.08■□□□□ 0.81
SSR4-205ENST00000447375 ANKLE2Q86XL3 938 aa20.06■□□□□ 0.8
SSR4-205ENST00000447375 RGS17Q9UGC6 210 aaPredicted RBP20.06■□□□□ 0.8
SSR4-205ENST00000447375 ATP7AQ04656 1500 aa20.04■□□□□ 0.8
SSR4-205ENST00000447375 SYCP2Q9BX26 1530 aa20.04■□□□□ 0.8
SSR4-205ENST00000447375 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
SSR4-205ENST00000447375 CDC42BPAQ5VT25 1732 aa20.04■□□□□ 0.8
SSR4-205ENST00000447375 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
SSR4-205ENST00000447375 NEURL4Q96JN8 1562 aa20.04■□□□□ 0.8
SSR4-205ENST00000447375 FBXO31Q5XUX0 539 aaPredicted RBP20.01■□□□□ 0.79
SSR4-205ENST00000447375 POLR1AO95602 1720 aaPredicted RBP20.01■□□□□ 0.79
SSR4-205ENST00000447375 VWDEQ8N2E2 1590 aa20■□□□□ 0.79
SSR4-205ENST00000447375 CCDC18Q5T9S5 1454 aa20■□□□□ 0.79
SSR4-205ENST00000447375 TNRQ92752 1358 aa20■□□□□ 0.79
SSR4-205ENST00000447375 LOC105371045A0A1W2PR82 267 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms