RNA–Protein interactions for RNA: ENST00000447223.5

ACAA1-208, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 3

Gene ACAA1, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-208ENST00000447223 SCAPERQ9BY12 1400 aa27.36■■□□□ 1.97
ACAA1-208ENST00000447223 TTC37Q6PGP7 1564 aa27.35■■□□□ 1.97
ACAA1-208ENST00000447223 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
ACAA1-208ENST00000447223 SIGLEC1Q9BZZ2 1709 aa27.33■■□□□ 1.97
ACAA1-208ENST00000447223 FER1L4A9Z1Z3 1794 aa27.32■■□□□ 1.96
ACAA1-208ENST00000447223 ATP10AO60312 1499 aa27.32■■□□□ 1.96
ACAA1-208ENST00000447223 ARHGEF12Q9NZN5 1544 aa27.28■■□□□ 1.96
ACAA1-208ENST00000447223 C9orf84Q5VXU9 1444 aa27.28■■□□□ 1.96
ACAA1-208ENST00000447223 UHRF1BP1Q6BDS2 1440 aa27.27■■□□□ 1.96
ACAA1-208ENST00000447223 PLCH2O75038 1416 aa27.26■■□□□ 1.95
ACAA1-208ENST00000447223 PREX1Q8TCU6 1659 aa27.25■■□□□ 1.95
ACAA1-208ENST00000447223 EFCAB2Q5VUJ9 269 aa27.25■■□□□ 1.95
ACAA1-208ENST00000447223 MYT1LQ9UL68 1186 aa27.25■■□□□ 1.95
ACAA1-208ENST00000447223 SPATA31D1Q6ZQQ2 1576 aa27.21■■□□□ 1.95
ACAA1-208ENST00000447223 ATP1B4Q9UN42 357 aaPredicted RBP27.2■■□□□ 1.94
ACAA1-208ENST00000447223 PTPRTO14522 1441 aa27.17■■□□□ 1.94
ACAA1-208ENST00000447223 ESF1Q9H501 851 aaKnown RBP27.17■■□□□ 1.94
ACAA1-208ENST00000447223 CDK13Q14004 1512 aaKnown RBP27.16■■□□□ 1.94
ACAA1-208ENST00000447223 STRCQ7RTU9 1775 aa27.16■■□□□ 1.94
ACAA1-208ENST00000447223 AFAP1Q8N556 730 aa27.14■■□□□ 1.94
ACAA1-208ENST00000447223 CDK11AQ9UQ88 783 aaPredicted RBP27.12■■□□□ 1.93
ACAA1-208ENST00000447223 ZNF518AQ6AHZ1 1483 aa27.1■■□□□ 1.93
ACAA1-208ENST00000447223 EEA1Q15075 1411 aa27.06■■□□□ 1.92
ACAA1-208ENST00000447223 SETD1BQ9UPS6 1966 aaKnown RBP27.06■■□□□ 1.92
ACAA1-208ENST00000447223 TRAPPC8Q9Y2L5 1435 aa27.03■■□□□ 1.92
ACAA1-208ENST00000447223 LTBP4Q8N2S1 1624 aa27.01■■□□□ 1.92
ACAA1-208ENST00000447223 IQSEC2Q5JU85 1478 aa27.01■■□□□ 1.91
ACAA1-208ENST00000447223 ARHGAP5Q13017 1502 aa27■■□□□ 1.91
ACAA1-208ENST00000447223 MYO5CQ9NQX4 1742 aa26.99■■□□□ 1.91
ACAA1-208ENST00000447223 UBAP1LF5GYI3 381 aa26.97■■□□□ 1.91
ACAA1-208ENST00000447223 NCOA1Q15788 1441 aa26.97■■□□□ 1.91
ACAA1-208ENST00000447223 KDM5CP41229 1560 aa26.97■■□□□ 1.91
ACAA1-208ENST00000447223 DIP2CQ9Y2E4 1556 aa26.96■■□□□ 1.91
ACAA1-208ENST00000447223 FMN1Q68DA7 1419 aa26.95■■□□□ 1.9
ACAA1-208ENST00000447223 CLIP1P30622 1438 aa26.93■■□□□ 1.9
ACAA1-208ENST00000447223 C3P01024 1663 aa26.93■■□□□ 1.9
ACAA1-208ENST00000447223 MLH3Q9UHC1 1453 aa26.93■■□□□ 1.9
ACAA1-208ENST00000447223 TROQ12816 1431 aaPredicted RBP26.92■■□□□ 1.9
ACAA1-208ENST00000447223 REREQ9P2R6 1566 aa26.92■■□□□ 1.9
ACAA1-208ENST00000447223 CNTLNQ9NXG0 1405 aa26.91■■□□□ 1.9
ACAA1-208ENST00000447223 KIF14Q15058 1648 aa26.91■■□□□ 1.9
ACAA1-208ENST00000447223 EHMT2Q96KQ7 1210 aa26.91■■□□□ 1.9
ACAA1-208ENST00000447223 UBTFP17480 764 aaKnown RBP26.9■■□□□ 1.9
ACAA1-208ENST00000447223 AGLP35573 1532 aa26.9■■□□□ 1.9
ACAA1-208ENST00000447223 NCKAP5LQ9HCH0 1330 aa26.9■■□□□ 1.9
ACAA1-208ENST00000447223 ZNF335Q9H4Z2 1342 aaPredicted RBP26.89■■□□□ 1.89
ACAA1-208ENST00000447223 ABCA6Q8N139 1617 aa26.86■■□□□ 1.89
ACAA1-208ENST00000447223 CAMSAP1Q5T5Y3 1602 aa26.85■■□□□ 1.89
ACAA1-208ENST00000447223 NPATQ14207 1427 aa26.82■■□□□ 1.88
ACAA1-208ENST00000447223 PKD2Q13563 968 aa26.81■■□□□ 1.88
ACAA1-208ENST00000447223 ZMYM3Q14202 1370 aa26.81■■□□□ 1.88
ACAA1-208ENST00000447223 SCAF1Q9H7N4 1312 aaKnown RBP26.77■■□□□ 1.88
ACAA1-208ENST00000447223 ARHGAP35Q9NRY4 1499 aa26.76■■□□□ 1.87
ACAA1-208ENST00000447223 ABCC1P33527 1531 aa26.75■■□□□ 1.87
ACAA1-208ENST00000447223 ZNF777Q9ULD5 760 aaPredicted RBP26.74■■□□□ 1.87
ACAA1-208ENST00000447223 PPP6R1Q9UPN7 881 aa26.72■■□□□ 1.87
ACAA1-208ENST00000447223 CDC42BPBQ9Y5S2 1711 aa26.71■■□□□ 1.87
ACAA1-208ENST00000447223 SPAG9O60271 1321 aaKnown RBP26.7■■□□□ 1.87
ACAA1-208ENST00000447223 PIP4K2BP78356 416 aa26.7■■□□□ 1.86
ACAA1-208ENST00000447223 HSPA1LP34931 641 aa26.69■■□□□ 1.86
ACAA1-208ENST00000447223 KIDINS220Q9ULH0 1771 aa26.69■■□□□ 1.86
ACAA1-208ENST00000447223 PLA2R1Q13018 1463 aa26.68■■□□□ 1.86
ACAA1-208ENST00000447223 ITSN2Q9NZM3 1697 aa26.66■■□□□ 1.86
ACAA1-208ENST00000447223 PREX2Q70Z35 1606 aa26.66■■□□□ 1.86
ACAA1-208ENST00000447223 TOM1O60784 492 aa26.66■■□□□ 1.86
ACAA1-208ENST00000447223 GGT6Q6P531 493 aa26.66■■□□□ 1.86
ACAA1-208ENST00000447223 MROH2AA6NES4 1674 aa26.65■■□□□ 1.86
ACAA1-208ENST00000447223 HNRNPMP52272 730 aaKnown RBP eCLIP26.64■■□□□ 1.86
ACAA1-208ENST00000447223 TCOF1Q13428 1488 aaKnown RBP26.63■■□□□ 1.85
ACAA1-208ENST00000447223 PHF23Q9BUL5 403 aaPredicted RBP26.61■■□□□ 1.85
ACAA1-208ENST00000447223 PTPRKQ15262 1439 aa26.61■■□□□ 1.85
ACAA1-208ENST00000447223 SAMD9LQ8IVG5 1584 aa26.61■■□□□ 1.85
ACAA1-208ENST00000447223 CEP170BQ9Y4F5 1589 aaPredicted RBP26.59■■□□□ 1.85
ACAA1-208ENST00000447223 MED1Q15648 1581 aaPredicted RBP26.58■■□□□ 1.85
ACAA1-208ENST00000447223 CCDC18Q5T9S5 1454 aa26.58■■□□□ 1.85
ACAA1-208ENST00000447223 MYO3AQ8NEV4 1616 aa26.57■■□□□ 1.84
ACAA1-208ENST00000447223 SUPT6HQ7KZ85 1726 aaKnown RBP26.56■■□□□ 1.84
ACAA1-208ENST00000447223 A2MP01023 1474 aa26.55■■□□□ 1.84
ACAA1-208ENST00000447223 ZNF142P52746 1687 aaPredicted RBP26.54■■□□□ 1.84
ACAA1-208ENST00000447223 CLTCQ00610 1675 aaKnown RBP26.54■■□□□ 1.84
ACAA1-208ENST00000447223 LRRIQ1Q96JM4 1722 aa26.54■■□□□ 1.84
ACAA1-208ENST00000447223 CASKIN1Q8WXD9 1431 aa26.54■■□□□ 1.84
ACAA1-208ENST00000447223 SYCP2Q9BX26 1530 aa26.54■■□□□ 1.84
ACAA1-208ENST00000447223 CFDP1Q9UEE9 299 aaPredicted RBP26.52■■□□□ 1.84
ACAA1-208ENST00000447223 ATP7AQ04656 1500 aa26.51■■□□□ 1.83
ACAA1-208ENST00000447223 A2ML1A8K2U0 1454 aa26.5■■□□□ 1.83
ACAA1-208ENST00000447223 CDC42BPAQ5VT25 1732 aa26.49■■□□□ 1.83
ACAA1-208ENST00000447223 CPS1P31327 1500 aa26.48■■□□□ 1.83
ACAA1-208ENST00000447223 GPATCH8Q9UKJ3 1502 aaKnown RBP26.48■■□□□ 1.83
ACAA1-208ENST00000447223 KIAA1107Q9UPP5 1409 aa26.48■■□□□ 1.83
ACAA1-208ENST00000447223 PLEKHH2Q8IVE3 1493 aa26.46■■□□□ 1.83
ACAA1-208ENST00000447223 SHANK2Q9UPX8 1470 aa26.46■■□□□ 1.83
ACAA1-208ENST00000447223 ANKLE2Q86XL3 938 aa26.45■■□□□ 1.82
ACAA1-208ENST00000447223 PLXNC1O60486 1568 aa26.45■■□□□ 1.82
ACAA1-208ENST00000447223 SENP3Q9H4L4 574 aaPredicted RBP26.43■■□□□ 1.82
ACAA1-208ENST00000447223 DNMT1P26358 1616 aaKnown RBP26.42■■□□□ 1.82
ACAA1-208ENST00000447223 CCNB3Q8WWL7 1395 aa26.42■■□□□ 1.82
ACAA1-208ENST00000447223 FBXO31Q5XUX0 539 aaPredicted RBP26.41■■□□□ 1.82
ACAA1-208ENST00000447223 TNRQ92752 1358 aa26.41■■□□□ 1.82
ACAA1-208ENST00000447223 INO80Q9ULG1 1556 aaPredicted RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms