RNA–Protein interactions for RNA: ENST00000446488.7

NFRKB-201, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 5,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-201ENST00000446488 HIRIP3Q9BW71 556 aaPredicted RBP14.33□□□□□ -0.12
NFRKB-201ENST00000446488 FHOD3Q2V2M9 1422 aa14.33□□□□□ -0.12
NFRKB-201ENST00000446488 U2SURPO15042 1029 aaKnown RBP14.33□□□□□ -0.12
NFRKB-201ENST00000446488 PPP4R2Q9NY27 417 aa14.32□□□□□ -0.12
NFRKB-201ENST00000446488 TNNT2P45379 298 aaPredicted RBP14.31□□□□□ -0.12
NFRKB-201ENST00000446488 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
NFRKB-201ENST00000446488 LAS1LQ9Y4W2 734 aaKnown RBP14.31□□□□□ -0.12
NFRKB-201ENST00000446488 NGDNQ8NEJ9 315 aaKnown RBP14.3□□□□□ -0.12
NFRKB-201ENST00000446488 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
NFRKB-201ENST00000446488 TMX4Q9H1E5 349 aaPredicted RBP14.29□□□□□ -0.12
NFRKB-201ENST00000446488 EIF3AQ14152 1382 aaKnown RBP14.28□□□□□ -0.12
NFRKB-201ENST00000446488 MORC1Q86VD1 984 aa14.28□□□□□ -0.12
NFRKB-201ENST00000446488 RTF1Q92541 710 aaKnown RBP14.28□□□□□ -0.12
NFRKB-201ENST00000446488 NOP58Q9Y2X3 529 aaKnown RBP14.28□□□□□ -0.12
NFRKB-201ENST00000446488 BECN1Q14457 450 aa14.28□□□□□ -0.12
NFRKB-201ENST00000446488 GRIN2BQ13224 1484 aa14.27□□□□□ -0.13
NFRKB-201ENST00000446488 CHMP4BQ9H444 224 aaKnown RBP14.27□□□□□ -0.13
NFRKB-201ENST00000446488 GOLGA2Q08379 1002 aa14.27□□□□□ -0.13
NFRKB-201ENST00000446488 TIMELESSQ9UNS1 1208 aa14.27□□□□□ -0.13
NFRKB-201ENST00000446488 AQRO60306 1485 aaKnown RBP eCLIP14.26□□□□□ -0.131e-7■■■■□ 21.6
NFRKB-201ENST00000446488 NEUROD2Q15784 382 aa14.25□□□□□ -0.13
NFRKB-201ENST00000446488 CHMP4AQ9BY43 222 aa14.25□□□□□ -0.13
NFRKB-201ENST00000446488 IFT140Q96RY7 1462 aa14.25□□□□□ -0.13
NFRKB-201ENST00000446488 MEX3CQ5U5Q3 659 aaKnown RBP14.25□□□□□ -0.13
NFRKB-201ENST00000446488 TERF2IPQ9NYB0 399 aa14.25□□□□□ -0.13
NFRKB-201ENST00000446488 SETD5Q9C0A6 1442 aa14.24□□□□□ -0.13
NFRKB-201ENST00000446488 CC2D2AQ9P2K1 1620 aa14.24□□□□□ -0.13
NFRKB-201ENST00000446488 VGFO15240 615 aaPredicted RBP14.23□□□□□ -0.13
NFRKB-201ENST00000446488 FTSJ3Q8IY81 847 aaKnown RBP14.23□□□□□ -0.13
NFRKB-201ENST00000446488 RAD54L2Q9Y4B4 1467 aa14.23□□□□□ -0.13
NFRKB-201ENST00000446488 ERICH6BQ5W0A0 696 aa14.23□□□□□ -0.13
NFRKB-201ENST00000446488 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.22□□□□□ -0.13
NFRKB-201ENST00000446488 SIN3AQ96ST3 1273 aa14.22□□□□□ -0.13
NFRKB-201ENST00000446488 RBM19Q9Y4C8 960 aaKnown RBP14.22□□□□□ -0.13
NFRKB-201ENST00000446488 UACAQ9BZF9 1416 aa14.21□□□□□ -0.13
NFRKB-201ENST00000446488 MPHOSPH9Q99550 1183 aa14.21□□□□□ -0.13
NFRKB-201ENST00000446488 CC2D1BQ5T0F9 858 aaKnown RBP14.21□□□□□ -0.14
NFRKB-201ENST00000446488 CCER2I3L3R5 266 aa14.2□□□□□ -0.14
NFRKB-201ENST00000446488 MS4A1P11836 297 aa14.2□□□□□ -0.14
NFRKB-201ENST00000446488 KANK4Q5T7N3 995 aaPredicted RBP14.19□□□□□ -0.14
NFRKB-201ENST00000446488 TRIM44Q96DX7 344 aaPredicted RBP14.19□□□□□ -0.14
NFRKB-201ENST00000446488 OS9Q13438 667 aaPredicted RBP14.18□□□□□ -0.14
NFRKB-201ENST00000446488 ROCK2O75116 1388 aaKnown RBP14.18□□□□□ -0.14
NFRKB-201ENST00000446488 NUTM2DQ5VT03 806 aaPredicted RBP14.18□□□□□ -0.14
NFRKB-201ENST00000446488 DEKP35659 375 aaKnown RBP14.17□□□□□ -0.14
NFRKB-201ENST00000446488 EVA1CP58658 441 aa14.16□□□□□ -0.14
NFRKB-201ENST00000446488 CALD1Q05682 793 aaKnown RBP14.16□□□□□ -0.14
NFRKB-201ENST00000446488 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
NFRKB-201ENST00000446488 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
NFRKB-201ENST00000446488 IGF1RP08069 1367 aa14.15□□□□□ -0.14
NFRKB-201ENST00000446488 ATF3P18847 181 aa14.15□□□□□ -0.14
NFRKB-201ENST00000446488 AMPHP49418 695 aa14.15□□□□□ -0.14
NFRKB-201ENST00000446488 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
NFRKB-201ENST00000446488 ZNF330Q9Y3S2 320 aaPredicted RBP14.13□□□□□ -0.15
NFRKB-201ENST00000446488 CDK11BP21127 795 aaKnown RBP14.13□□□□□ -0.15
NFRKB-201ENST00000446488 FOXD1Q16676 465 aa14.12□□□□□ -0.15
NFRKB-201ENST00000446488 CFTRP13569 1480 aa14.12□□□□□ -0.15
NFRKB-201ENST00000446488 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
NFRKB-201ENST00000446488 GOLGA6L22H0YM25 854 aa14.11□□□□□ -0.15
NFRKB-201ENST00000446488 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
NFRKB-201ENST00000446488 NESP48681 1621 aa14.11□□□□□ -0.15
NFRKB-201ENST00000446488 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
NFRKB-201ENST00000446488 B4GALNT3Q6L9W6 998 aa14.11□□□□□ -0.15
NFRKB-201ENST00000446488 CCDC144AA2RUR9 1427 aa14.11□□□□□ -0.15
NFRKB-201ENST00000446488 POGZQ7Z3K3 1410 aa14.1□□□□□ -0.15
NFRKB-201ENST00000446488 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
NFRKB-201ENST00000446488 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
NFRKB-201ENST00000446488 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
NFRKB-201ENST00000446488 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
NFRKB-201ENST00000446488 TRAK1Q9UPV9 953 aa14.08□□□□□ -0.16
NFRKB-201ENST00000446488 KTN1Q86UP2 1357 aaKnown RBP14.06□□□□□ -0.16
NFRKB-201ENST00000446488 U2AF1L5P0DN76 240 aaPredicted RBP14.06□□□□□ -0.16
NFRKB-201ENST00000446488 U2AF1Q01081 240 aaKnown RBP eCLIP14.06□□□□□ -0.166e-6■■■■□ 22.1
NFRKB-201ENST00000446488 PSME1Q06323 249 aa14.06□□□□□ -0.16
NFRKB-201ENST00000446488 HDAC5Q9UQL6 1122 aa14.06□□□□□ -0.16
NFRKB-201ENST00000446488 G3V3G9 751 aa14.05□□□□□ -0.16
NFRKB-201ENST00000446488 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
NFRKB-201ENST00000446488 GTF2E1P29083 439 aaPredicted RBP14.05□□□□□ -0.16
NFRKB-201ENST00000446488 NAP1L5Q96NT1 182 aaPredicted RBP14.05□□□□□ -0.16
NFRKB-201ENST00000446488 FRAT1Q92837 279 aaPredicted RBP14.05□□□□□ -0.16
NFRKB-201ENST00000446488 MYOM3Q5VTT5 1437 aa14.04□□□□□ -0.16
NFRKB-201ENST00000446488 THEMISQ8N1K5 641 aaPredicted RBP14.04□□□□□ -0.16
NFRKB-201ENST00000446488 LTV1Q96GA3 475 aaPredicted RBP14.04□□□□□ -0.16
NFRKB-201ENST00000446488 EVC2Q86UK5 1308 aa14.04□□□□□ -0.16
NFRKB-201ENST00000446488 MSH5O43196 834 aa14.02□□□□□ -0.16
NFRKB-201ENST00000446488 NCLP19338 710 aaKnown RBP14.02□□□□□ -0.16
NFRKB-201ENST00000446488 LMOD3Q0VAK6 560 aa14.02□□□□□ -0.16
NFRKB-201ENST00000446488 STK31Q9BXU1 1019 aa14.02□□□□□ -0.16
NFRKB-201ENST00000446488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.02□□□□□ -0.17
NFRKB-201ENST00000446488 COG3Q96JB2 828 aa14.02□□□□□ -0.17
NFRKB-201ENST00000446488 RAB3GAP2Q9H2M9 1393 aa14.02□□□□□ -0.17
NFRKB-201ENST00000446488 STAC3Q96MF2 364 aa14.01□□□□□ -0.17
NFRKB-201ENST00000446488 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
NFRKB-201ENST00000446488 HSPA5P11021 654 aaKnown RBP14.01□□□□□ -0.17
NFRKB-201ENST00000446488 TOPBP1Q92547 1522 aa14.01□□□□□ -0.17
NFRKB-201ENST00000446488 FGD1P98174 961 aa14□□□□□ -0.17
NFRKB-201ENST00000446488 IPO8O15397 1037 aaKnown RBP14□□□□□ -0.17
NFRKB-201ENST00000446488 PROSER2Q86WR7 435 aaPredicted RBP14□□□□□ -0.17
NFRKB-201ENST00000446488 C1orf141Q5JVX7 400 aa13.99□□□□□ -0.17
NFRKB-201ENST00000446488 KCNJ4P48050 445 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms