RNA–Protein interactions for RNA: ENST00000446425.2

UBXN2A-203, Transcript of UBX domain protein 2A, humanhuman

TSL 1 (best)

Gene UBXN2A, Length 2,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-203ENST00000446425 RTN4Q9NQC3 1192 aaKnown RBP22.66■■□□□ 1.22
UBXN2A-203ENST00000446425 RRP7BPQ9NSQ0 103 aa22.66■■□□□ 1.22
UBXN2A-203ENST00000446425 EHBP1L1Q8N3D4 1523 aa22.66■■□□□ 1.22
UBXN2A-203ENST00000446425 THOC2Q8NI27 1593 aaKnown RBP22.65■■□□□ 1.22
UBXN2A-203ENST00000446425 TCOF1Q13428 1488 aaKnown RBP22.65■■□□□ 1.22
UBXN2A-203ENST00000446425 UGGT2Q9NYU1 1516 aa22.64■■□□□ 1.21
UBXN2A-203ENST00000446425 DHX29Q7Z478 1369 aaKnown RBP22.63■■□□□ 1.21
UBXN2A-203ENST00000446425 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
UBXN2A-203ENST00000446425 NBPF8Q3BBV2 869 aa22.63■■□□□ 1.21
UBXN2A-203ENST00000446425 ARHGEF11O15085 1522 aa22.63■■□□□ 1.21
UBXN2A-203ENST00000446425 CUL7Q14999 1698 aa22.62■■□□□ 1.21
UBXN2A-203ENST00000446425 RPRD2Q5VT52 1461 aaKnown RBP22.62■■□□□ 1.21
UBXN2A-203ENST00000446425 KDM6BO15054 1643 aa22.61■■□□□ 1.21
UBXN2A-203ENST00000446425 NPM2Q86SE8 214 aaKnown RBP22.61■■□□□ 1.21
UBXN2A-203ENST00000446425 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
UBXN2A-203ENST00000446425 MS4A1P11836 297 aa22.6■■□□□ 1.21
UBXN2A-203ENST00000446425 PDE4AP27815 886 aa22.6■■□□□ 1.21
UBXN2A-203ENST00000446425 LAS1LQ9Y4W2 734 aaKnown RBP22.6■■□□□ 1.21
UBXN2A-203ENST00000446425 TEX14Q8IWB6 1497 aa22.59■■□□□ 1.21
UBXN2A-203ENST00000446425 BACH2Q9BYV9 841 aa22.59■■□□□ 1.21
UBXN2A-203ENST00000446425 CHIC2Q9UKJ5 165 aa22.57■■□□□ 1.2
UBXN2A-203ENST00000446425 ANKRD30BQ9BXX2 1392 aa22.57■■□□□ 1.2
UBXN2A-203ENST00000446425 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
UBXN2A-203ENST00000446425 MIA2Q96PC5 1412 aa22.57■■□□□ 1.2
UBXN2A-203ENST00000446425 SAMD9Q5K651 1589 aa22.57■■□□□ 1.2
UBXN2A-203ENST00000446425 PNISRQ8TF01 805 aaKnown RBP22.56■■□□□ 1.2
UBXN2A-203ENST00000446425 UBE2Q2Q8WVN8 375 aa22.56■■□□□ 1.2
UBXN2A-203ENST00000446425 ABCA10Q8WWZ4 1543 aa22.55■■□□□ 1.2
UBXN2A-203ENST00000446425 RRP1P56182 461 aaKnown RBP22.53■■□□□ 1.2
UBXN2A-203ENST00000446425 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.53■■□□□ 1.2
UBXN2A-203ENST00000446425 ARID4BQ4LE39 1312 aaPredicted RBP22.51■■□□□ 1.19
UBXN2A-203ENST00000446425 FOXD1Q16676 465 aa22.51■■□□□ 1.19
UBXN2A-203ENST00000446425 DDRGK1Q96HY6 314 aa22.5■■□□□ 1.19
UBXN2A-203ENST00000446425 EXOC6Q8TAG9 804 aa22.5■■□□□ 1.19
UBXN2A-203ENST00000446425 GSE1Q14687 1217 aa22.49■■□□□ 1.19
UBXN2A-203ENST00000446425 TMC1Q8TDI8 760 aa22.48■■□□□ 1.19
UBXN2A-203ENST00000446425 LRPPRCP42704 1394 aaKnown RBP22.47■■□□□ 1.19
UBXN2A-203ENST00000446425 MAGI3Q5TCQ9 1506 aa22.47■■□□□ 1.19
UBXN2A-203ENST00000446425 BCORL1Q5H9F3 1711 aa22.46■■□□□ 1.19
UBXN2A-203ENST00000446425 RAD54L2Q9Y4B4 1467 aa22.45■■□□□ 1.18
UBXN2A-203ENST00000446425 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
UBXN2A-203ENST00000446425 RCAN3Q9UKA8 241 aa22.43■■□□□ 1.18
UBXN2A-203ENST00000446425 BRPF3Q9ULD4 1205 aa22.43■■□□□ 1.18
UBXN2A-203ENST00000446425 ROCK2O75116 1388 aaKnown RBP22.43■■□□□ 1.18
UBXN2A-203ENST00000446425 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
UBXN2A-203ENST00000446425 ROCK1Q13464 1354 aa22.41■■□□□ 1.18
UBXN2A-203ENST00000446425 BRD4O60885 1362 aaPredicted RBP22.4■■□□□ 1.18
UBXN2A-203ENST00000446425 CNGB1Q14028 1251 aaPredicted RBP22.4■■□□□ 1.18
UBXN2A-203ENST00000446425 USP47Q96K76 1375 aa22.4■■□□□ 1.18
UBXN2A-203ENST00000446425 KTN1Q86UP2 1357 aaKnown RBP22.39■■□□□ 1.17
UBXN2A-203ENST00000446425 MBD5Q9P267 1494 aa22.38■■□□□ 1.17
UBXN2A-203ENST00000446425 PDE3BQ13370 1112 aa22.38■■□□□ 1.17
UBXN2A-203ENST00000446425 POLA1P09884 1462 aaPredicted RBP22.38■■□□□ 1.17
UBXN2A-203ENST00000446425 NFKBIBQ15653 356 aa22.38■■□□□ 1.17
UBXN2A-203ENST00000446425 KIF15Q9NS87 1388 aa22.37■■□□□ 1.17
UBXN2A-203ENST00000446425 SENP3-EIF4A1A0A087X0R7 540 aa22.36■■□□□ 1.17
UBXN2A-203ENST00000446425 FANCD2Q9BXW9 1451 aa22.36■■□□□ 1.17
UBXN2A-203ENST00000446425 KDM5CP41229 1560 aa22.36■■□□□ 1.17
UBXN2A-203ENST00000446425 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
UBXN2A-203ENST00000446425 SLC4A1APQ9BWU0 796 aaKnown RBP22.35■■□□□ 1.17
UBXN2A-203ENST00000446425 MYBBP1AQ9BQG0 1328 aaKnown RBP22.34■■□□□ 1.17
UBXN2A-203ENST00000446425 KIF14Q15058 1648 aa22.33■■□□□ 1.17
UBXN2A-203ENST00000446425 RALBP1Q15311 655 aa22.33■■□□□ 1.16
UBXN2A-203ENST00000446425 FRAT1Q92837 279 aaPredicted RBP22.32■■□□□ 1.16
UBXN2A-203ENST00000446425 TOPBP1Q92547 1522 aa22.32■■□□□ 1.16
UBXN2A-203ENST00000446425 DAPK1P53355 1430 aa22.31■■□□□ 1.16
UBXN2A-203ENST00000446425 DNMT1P26358 1616 aaKnown RBP22.27■■□□□ 1.16
UBXN2A-203ENST00000446425 RSPH6AQ9H0K4 717 aa22.26■■□□□ 1.15
UBXN2A-203ENST00000446425 DAXXQ9UER7 740 aaPredicted RBP22.26■■□□□ 1.15
UBXN2A-203ENST00000446425 EPRSP07814 1512 aaKnown RBP22.26■■□□□ 1.15
UBXN2A-203ENST00000446425 NESP48681 1621 aa22.26■■□□□ 1.15
UBXN2A-203ENST00000446425 EIF5BO60841 1220 aaKnown RBP22.25■■□□□ 1.15
UBXN2A-203ENST00000446425 ABCC5O15440 1437 aa22.24■■□□□ 1.15
UBXN2A-203ENST00000446425 FAM43AQ8N2R8 423 aa22.24■■□□□ 1.15
UBXN2A-203ENST00000446425 PZPP20742 1482 aa22.24■■□□□ 1.15
UBXN2A-203ENST00000446425 UHRF1BP1Q6BDS2 1440 aa22.22■■□□□ 1.15
UBXN2A-203ENST00000446425 RALGAPBQ86X10 1494 aa22.21■■□□□ 1.15
UBXN2A-203ENST00000446425 E9PCH4 1651 aa22.2■■□□□ 1.15
UBXN2A-203ENST00000446425 KIAA1107Q9UPP5 1409 aa22.2■■□□□ 1.14
UBXN2A-203ENST00000446425 CRBNQ96SW2 442 aa22.19■■□□□ 1.14
UBXN2A-203ENST00000446425 ZNF326Q5BKZ1 582 aaKnown RBP22.18■■□□□ 1.14
UBXN2A-203ENST00000446425 NLRP13Q86W25 1043 aa22.18■■□□□ 1.14
UBXN2A-203ENST00000446425 SLC4A3P48751 1232 aa22.18■■□□□ 1.14
UBXN2A-203ENST00000446425 INSRP06213 1382 aa22.17■■□□□ 1.14
UBXN2A-203ENST00000446425 CDK13Q14004 1512 aaKnown RBP22.15■■□□□ 1.14
UBXN2A-203ENST00000446425 PLIN1O60240 522 aa22.15■■□□□ 1.14
UBXN2A-203ENST00000446425 CDCA7LQ96GN5 454 aa22.15■■□□□ 1.14
UBXN2A-203ENST00000446425 KDM2BQ8NHM5 1336 aa22.15■■□□□ 1.14
UBXN2A-203ENST00000446425 FAM161AQ3B820 660 aa22.14■■□□□ 1.13
UBXN2A-203ENST00000446425 SKAP1Q86WV1 359 aa22.14■■□□□ 1.13
UBXN2A-203ENST00000446425 ZMYM4Q5VZL5 1548 aa22.14■■□□□ 1.13
UBXN2A-203ENST00000446425 CARD11Q9BXL7 1154 aa22.14■■□□□ 1.13
UBXN2A-203ENST00000446425 PARD3Q8TEW0 1356 aa22.13■■□□□ 1.13
UBXN2A-203ENST00000446425 LAMC3Q9Y6N6 1575 aa22.13■■□□□ 1.13
UBXN2A-203ENST00000446425 CENPQQ7L2Z9 268 aaPredicted RBP22.12■■□□□ 1.13
UBXN2A-203ENST00000446425 GAPVD1Q14C86 1478 aa22.12■■□□□ 1.13
UBXN2A-203ENST00000446425 FRAT2O75474 233 aaPredicted RBP22.11■■□□□ 1.13
UBXN2A-203ENST00000446425 WDR62O43379 1518 aa22.11■■□□□ 1.13
UBXN2A-203ENST00000446425 ARHGEF12Q9NZN5 1544 aa22.09■■□□□ 1.13
UBXN2A-203ENST00000446425 C8orf34Q49A92 452 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms