RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TROQ12816 1431 aaPredicted RBP24.02■■□□□ 1.44
LAPTM4B-201ENST00000445593 MPHOSPH9Q99550 1183 aa24■■□□□ 1.43
LAPTM4B-201ENST00000445593 DAPK1P53355 1430 aa23.99■■□□□ 1.43
LAPTM4B-201ENST00000445593 ABCC5O15440 1437 aa23.98■■□□□ 1.43
LAPTM4B-201ENST00000445593 KIF14Q15058 1648 aa23.98■■□□□ 1.43
LAPTM4B-201ENST00000445593 PTPRGP23470 1445 aa23.97■■□□□ 1.43
LAPTM4B-201ENST00000445593 KCNH8Q96L42 1107 aa23.97■■□□□ 1.43
LAPTM4B-201ENST00000445593 SLC4A1APQ9BWU0 796 aaKnown RBP23.95■■□□□ 1.42
LAPTM4B-201ENST00000445593 ATP10BO94823 1461 aa23.91■■□□□ 1.42
LAPTM4B-201ENST00000445593 GPATCH8Q9UKJ3 1502 aaKnown RBP23.91■■□□□ 1.42
LAPTM4B-201ENST00000445593 TIMELESSQ9UNS1 1208 aa23.91■■□□□ 1.42
LAPTM4B-201ENST00000445593 CAMSAP2Q08AD1 1489 aa23.9■■□□□ 1.42
LAPTM4B-201ENST00000445593 HNRNPMP52272 730 aaKnown RBP eCLIP23.89■■□□□ 1.413e-6■■■■□ 24.7
LAPTM4B-201ENST00000445593 DENND4BO75064 1496 aaPredicted RBP23.87■■□□□ 1.41
LAPTM4B-201ENST00000445593 CHD1O14646 1710 aa23.87■■□□□ 1.41
LAPTM4B-201ENST00000445593 L3MBTL2Q969R5 705 aa23.84■■□□□ 1.41
LAPTM4B-201ENST00000445593 GCC2Q8IWJ2 1684 aa23.83■■□□□ 1.41
LAPTM4B-201ENST00000445593 DNMT1P26358 1616 aaKnown RBP23.82■■□□□ 1.4
LAPTM4B-201ENST00000445593 ABCA8O94911 1581 aa23.82■■□□□ 1.4
LAPTM4B-201ENST00000445593 ERCC6L2Q5T890 1561 aa23.82■■□□□ 1.4
LAPTM4B-201ENST00000445593 ZNF326Q5BKZ1 582 aaKnown RBP23.81■■□□□ 1.4
LAPTM4B-201ENST00000445593 AKNAQ7Z591 1439 aa23.8■■□□□ 1.4
LAPTM4B-201ENST00000445593 TSPY4P0CV99 314 aa23.78■■□□□ 1.4
LAPTM4B-201ENST00000445593 TSPY10P0CW01 314 aa23.78■■□□□ 1.4
LAPTM4B-201ENST00000445593 ROCK1Q13464 1354 aa23.77■■□□□ 1.4
LAPTM4B-201ENST00000445593 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
LAPTM4B-201ENST00000445593 PKD2Q13563 968 aa23.74■■□□□ 1.39
LAPTM4B-201ENST00000445593 HSPA5P11021 654 aaKnown RBP23.73■■□□□ 1.39
LAPTM4B-201ENST00000445593 ANKRD30AQ9BXX3 1397 aa23.72■■□□□ 1.39
LAPTM4B-201ENST00000445593 ITSN2Q9NZM3 1697 aa23.71■■□□□ 1.39
LAPTM4B-201ENST00000445593 ABCC10Q5T3U5 1492 aa23.69■■□□□ 1.38
LAPTM4B-201ENST00000445593 ANKRD30BQ9BXX2 1392 aa23.69■■□□□ 1.38
LAPTM4B-201ENST00000445593 NBPF8Q3BBV2 869 aa23.68■■□□□ 1.38
LAPTM4B-201ENST00000445593 ANKRD50Q9ULJ7 1429 aa23.68■■□□□ 1.38
LAPTM4B-201ENST00000445593 CNGB1Q14028 1251 aaPredicted RBP23.68■■□□□ 1.38
LAPTM4B-201ENST00000445593 KDM5BQ9UGL1 1544 aa23.68■■□□□ 1.38
LAPTM4B-201ENST00000445593 C9orf84Q5VXU9 1444 aa23.67■■□□□ 1.38
LAPTM4B-201ENST00000445593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.67■■□□□ 1.38
LAPTM4B-201ENST00000445593 NUP155O75694 1391 aa23.67■■□□□ 1.38
LAPTM4B-201ENST00000445593 CDC42BPAQ5VT25 1732 aa23.67■■□□□ 1.38
LAPTM4B-201ENST00000445593 ANP32CO43423 234 aa23.66■■□□□ 1.38
LAPTM4B-201ENST00000445593 BCL11AQ9H165 835 aa23.66■■□□□ 1.38
LAPTM4B-201ENST00000445593 ADCY10Q96PN6 1610 aa23.65■■□□□ 1.38
LAPTM4B-201ENST00000445593 EIF4G2P78344 907 aaKnown RBP eCLIP23.64■■□□□ 1.37
LAPTM4B-201ENST00000445593 POLR3GLQ9BT43 218 aa23.64■■□□□ 1.37
LAPTM4B-201ENST00000445593 PZPP20742 1482 aa23.62■■□□□ 1.37
LAPTM4B-201ENST00000445593 KIF15Q9NS87 1388 aa23.62■■□□□ 1.37
LAPTM4B-201ENST00000445593 KDM2AQ9Y2K7 1162 aa23.6■■□□□ 1.37
LAPTM4B-201ENST00000445593 PRKCSHP14314 528 aaPredicted RBP23.59■■□□□ 1.37
LAPTM4B-201ENST00000445593 WASHC2AQ641Q2 1341 aa23.58■■□□□ 1.37
LAPTM4B-201ENST00000445593 ARHGAP5Q13017 1502 aa23.58■■□□□ 1.36
LAPTM4B-201ENST00000445593 RPRD2Q5VT52 1461 aaKnown RBP23.57■■□□□ 1.36
LAPTM4B-201ENST00000445593 C11orf95C9JLR9 678 aaPredicted RBP23.56■■□□□ 1.36
LAPTM4B-201ENST00000445593 TTC37Q6PGP7 1564 aa23.54■■□□□ 1.36
LAPTM4B-201ENST00000445593 ADGBQ8N7X0 1667 aa23.53■■□□□ 1.36
LAPTM4B-201ENST00000445593 ADGRL2O95490 1459 aa23.53■■□□□ 1.36
LAPTM4B-201ENST00000445593 KIAA1107Q9UPP5 1409 aa23.52■■□□□ 1.36
LAPTM4B-201ENST00000445593 SYCP2Q9BX26 1530 aa23.52■■□□□ 1.35
LAPTM4B-201ENST00000445593 CROCC2H7BZ55 1655 aa23.51■■□□□ 1.35
LAPTM4B-201ENST00000445593 SAMD9LQ8IVG5 1584 aa23.51■■□□□ 1.35
LAPTM4B-201ENST00000445593 MBD5Q9P267 1494 aa23.51■■□□□ 1.35
LAPTM4B-201ENST00000445593 ABCC2Q92887 1545 aa23.51■■□□□ 1.35
LAPTM4B-201ENST00000445593 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
LAPTM4B-201ENST00000445593 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
LAPTM4B-201ENST00000445593 TEX14Q8IWB6 1497 aa23.49■■□□□ 1.35
LAPTM4B-201ENST00000445593 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.49■■□□□ 1.351e-8■■□□□ 11.6
LAPTM4B-201ENST00000445593 RGL3Q3MIN7 710 aa23.49■■□□□ 1.35
LAPTM4B-201ENST00000445593 CDC42BPBQ9Y5S2 1711 aa23.48■■□□□ 1.35
LAPTM4B-201ENST00000445593 CCDC141Q6ZP82 1450 aa23.48■■□□□ 1.35
LAPTM4B-201ENST00000445593 DCAF11Q8TEB1 546 aa23.44■■□□□ 1.34
LAPTM4B-201ENST00000445593 PREX2Q70Z35 1606 aa23.43■■□□□ 1.34
LAPTM4B-201ENST00000445593 AFAP1Q8N556 730 aa23.42■■□□□ 1.34
LAPTM4B-201ENST00000445593 SHANK2Q9UPX8 1470 aa23.42■■□□□ 1.34
LAPTM4B-201ENST00000445593 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
LAPTM4B-201ENST00000445593 CLASP1Q7Z460 1538 aa23.41■■□□□ 1.34
LAPTM4B-201ENST00000445593 ZCCHC11Q5TAX3 1644 aaKnown RBP23.37■■□□□ 1.33
LAPTM4B-201ENST00000445593 ARHGEF12Q9NZN5 1544 aa23.37■■□□□ 1.33
LAPTM4B-201ENST00000445593 RSPH4AQ5TD94 716 aa23.37■■□□□ 1.33
LAPTM4B-201ENST00000445593 PLEKHH2Q8IVE3 1493 aa23.36■■□□□ 1.33
LAPTM4B-201ENST00000445593 KIF7Q2M1P5 1343 aa23.36■■□□□ 1.33
LAPTM4B-201ENST00000445593 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
LAPTM4B-201ENST00000445593 CARD11Q9BXL7 1154 aa23.35■■□□□ 1.33
LAPTM4B-201ENST00000445593 CCER2I3L3R5 266 aa23.35■■□□□ 1.33
LAPTM4B-201ENST00000445593 CCDC184Q52MB2 194 aa23.35■■□□□ 1.33
LAPTM4B-201ENST00000445593 BCANQ96GW7 911 aa23.35■■□□□ 1.33
LAPTM4B-201ENST00000445593 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
LAPTM4B-201ENST00000445593 TRAPPC8Q9Y2L5 1435 aa23.33■■□□□ 1.32
LAPTM4B-201ENST00000445593 USP47Q96K76 1375 aa23.33■■□□□ 1.32
LAPTM4B-201ENST00000445593 MYO5CQ9NQX4 1742 aa23.31■■□□□ 1.32
LAPTM4B-201ENST00000445593 PLCH2O75038 1416 aa23.31■■□□□ 1.32
LAPTM4B-201ENST00000445593 HNRNPUQ00839 825 aaKnown RBP eCLIP23.3■■□□□ 1.32
LAPTM4B-201ENST00000445593 FAM135AQ9P2D6 1515 aa23.29■■□□□ 1.32
LAPTM4B-201ENST00000445593 SPAG9O60271 1321 aaKnown RBP23.29■■□□□ 1.32
LAPTM4B-201ENST00000445593 SENP3-EIF4A1A0A087X0R7 540 aa23.29■■□□□ 1.32
LAPTM4B-201ENST00000445593 SUPT16HQ9Y5B9 1047 aaKnown RBP23.29■■□□□ 1.32
LAPTM4B-201ENST00000445593 FAM9BQ8IZU0 186 aa23.28■■□□□ 1.32
LAPTM4B-201ENST00000445593 OSCARQ8IYS5 282 aa23.27■■□□□ 1.32
LAPTM4B-201ENST00000445593 CNTLNQ9NXG0 1405 aa23.26■■□□□ 1.31
LAPTM4B-201ENST00000445593 CCDC144AA2RUR9 1427 aa23.26■■□□□ 1.31
LAPTM4B-201ENST00000445593 ST20-MTHFSA0A0A6YYL1 179 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms