RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 RRP7BPQ9NSQ0 103 aa20.3■□□□□ 0.84
NCLP1-201ENST00000445357 ABCC5O15440 1437 aa20.3■□□□□ 0.84
NCLP1-201ENST00000445357 KIF14Q15058 1648 aa20.3■□□□□ 0.84
NCLP1-201ENST00000445357 YTHDC1Q96MU7 727 aaKnown RBP20.29■□□□□ 0.84
NCLP1-201ENST00000445357 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
NCLP1-201ENST00000445357 KDM5BQ9UGL1 1544 aa20.28■□□□□ 0.84
NCLP1-201ENST00000445357 ADGBQ8N7X0 1667 aa20.28■□□□□ 0.84
NCLP1-201ENST00000445357 CROCC2H7BZ55 1655 aa20.26■□□□□ 0.83
NCLP1-201ENST00000445357 GTF3C3Q9Y5Q9 886 aa20.25■□□□□ 0.83
NCLP1-201ENST00000445357 CAMSAP2Q08AD1 1489 aa20.25■□□□□ 0.83
NCLP1-201ENST00000445357 GPATCH8Q9UKJ3 1502 aaKnown RBP20.25■□□□□ 0.83
NCLP1-201ENST00000445357 CHD1O14646 1710 aa20.24■□□□□ 0.83
NCLP1-201ENST00000445357 CDC42BPAQ5VT25 1732 aa20.22■□□□□ 0.83
NCLP1-201ENST00000445357 ZNF644Q9H582 1327 aaPredicted RBP20.2■□□□□ 0.82
NCLP1-201ENST00000445357 ATP10BO94823 1461 aa20.19■□□□□ 0.82
NCLP1-201ENST00000445357 ADGRL2O95490 1459 aa20.19■□□□□ 0.82
NCLP1-201ENST00000445357 ABCC10Q5T3U5 1492 aa20.18■□□□□ 0.82
NCLP1-201ENST00000445357 SHROOM2Q13796 1616 aa20.18■□□□□ 0.82
NCLP1-201ENST00000445357 TRIM52Q96A61 297 aa20.17■□□□□ 0.82
NCLP1-201ENST00000445357 MPHOSPH9Q99550 1183 aa20.17■□□□□ 0.82
NCLP1-201ENST00000445357 CFDP1Q9UEE9 299 aaPredicted RBP20.16■□□□□ 0.82
NCLP1-201ENST00000445357 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
NCLP1-201ENST00000445357 SHANK2Q9UPX8 1470 aa20.12■□□□□ 0.81
NCLP1-201ENST00000445357 PLEKHD1A6NEE1 506 aa20.11■□□□□ 0.81
NCLP1-201ENST00000445357 PTPRGP23470 1445 aa20.11■□□□□ 0.81
NCLP1-201ENST00000445357 ANKRD30BQ9BXX2 1392 aa20.1■□□□□ 0.81
NCLP1-201ENST00000445357 RPRD2Q5VT52 1461 aaKnown RBP20.09■□□□□ 0.81
NCLP1-201ENST00000445357 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.81
NCLP1-201ENST00000445357 PZPP20742 1482 aa20.08■□□□□ 0.8
NCLP1-201ENST00000445357 ARHGEF5Q12774 1597 aa20.06■□□□□ 0.8
NCLP1-201ENST00000445357 PREX2Q70Z35 1606 aa20.05■□□□□ 0.8
NCLP1-201ENST00000445357 ANKRD30AQ9BXX3 1397 aa20.05■□□□□ 0.8
NCLP1-201ENST00000445357 TEX14Q8IWB6 1497 aa20.04■□□□□ 0.8
NCLP1-201ENST00000445357 CDC42BPBQ9Y5S2 1711 aa20.03■□□□□ 0.8
NCLP1-201ENST00000445357 HIRIP3Q9BW71 556 aaPredicted RBP20.02■□□□□ 0.8
NCLP1-201ENST00000445357 ZNF777Q9ULD5 760 aaPredicted RBP20.01■□□□□ 0.79
NCLP1-201ENST00000445357 C9orf84Q5VXU9 1444 aa20■□□□□ 0.79
NCLP1-201ENST00000445357 SLC4A1APQ9BWU0 796 aaKnown RBP19.99■□□□□ 0.79
NCLP1-201ENST00000445357 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
NCLP1-201ENST00000445357 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
NCLP1-201ENST00000445357 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
NCLP1-201ENST00000445357 FOXD1Q16676 465 aa19.99■□□□□ 0.79
NCLP1-201ENST00000445357 L3MBTL2Q969R5 705 aa19.99■□□□□ 0.79
NCLP1-201ENST00000445357 KDM5DQ9BY66 1539 aa19.99■□□□□ 0.79
NCLP1-201ENST00000445357 ANKRD50Q9ULJ7 1429 aa19.99■□□□□ 0.79
NCLP1-201ENST00000445357 SAMD9LQ8IVG5 1584 aa19.98■□□□□ 0.79
NCLP1-201ENST00000445357 ABCC2Q92887 1545 aa19.98■□□□□ 0.79
NCLP1-201ENST00000445357 KIAA1107Q9UPP5 1409 aa19.97■□□□□ 0.79
NCLP1-201ENST00000445357 MBD5Q9P267 1494 aa19.97■□□□□ 0.79
NCLP1-201ENST00000445357 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
NCLP1-201ENST00000445357 ERCC6L2Q5T890 1561 aa19.96■□□□□ 0.79
NCLP1-201ENST00000445357 CCER2I3L3R5 266 aa19.95■□□□□ 0.78
NCLP1-201ENST00000445357 CYB5RLQ6IPT4 315 aa19.94■□□□□ 0.78
NCLP1-201ENST00000445357 CCDC141Q6ZP82 1450 aa19.93■□□□□ 0.78
NCLP1-201ENST00000445357 TTC37Q6PGP7 1564 aa19.93■□□□□ 0.78
NCLP1-201ENST00000445357 POLR1AO95602 1720 aaPredicted RBP19.93■□□□□ 0.78
NCLP1-201ENST00000445357 KCNH8Q96L42 1107 aa19.92■□□□□ 0.78
NCLP1-201ENST00000445357 MYO5CQ9NQX4 1742 aa19.92■□□□□ 0.78
NCLP1-201ENST00000445357 MAST1Q9Y2H9 1570 aa19.92■□□□□ 0.78
NCLP1-201ENST00000445357 ANP32CO43423 234 aa19.92■□□□□ 0.78
NCLP1-201ENST00000445357 HSPA5P11021 654 aaKnown RBP19.92■□□□□ 0.78
NCLP1-201ENST00000445357 EIF4G2P78344 907 aaKnown RBP eCLIP19.91■□□□□ 0.78
NCLP1-201ENST00000445357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.91■□□□□ 0.78
NCLP1-201ENST00000445357 TSPY4P0CV99 314 aa19.88■□□□□ 0.77
NCLP1-201ENST00000445357 TSPY10P0CW01 314 aa19.88■□□□□ 0.77
NCLP1-201ENST00000445357 UHRF1BP1LA0JNW5 1464 aa19.87■□□□□ 0.77
NCLP1-201ENST00000445357 RSPH4AQ5TD94 716 aa19.87■□□□□ 0.77
NCLP1-201ENST00000445357 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
NCLP1-201ENST00000445357 WASHC2AQ641Q2 1341 aa19.87■□□□□ 0.77
NCLP1-201ENST00000445357 NBPF8Q3BBV2 869 aa19.86■□□□□ 0.77
NCLP1-201ENST00000445357 PELP1Q8IZL8 1130 aaKnown RBP19.86■□□□□ 0.77
NCLP1-201ENST00000445357 ZCCHC11Q5TAX3 1644 aaKnown RBP19.86■□□□□ 0.77
NCLP1-201ENST00000445357 SYCP2Q9BX26 1530 aa19.85■□□□□ 0.77
NCLP1-201ENST00000445357 ARHGAP5Q13017 1502 aa19.85■□□□□ 0.77
NCLP1-201ENST00000445357 PKD2Q13563 968 aa19.84■□□□□ 0.77
NCLP1-201ENST00000445357 SPATA31E1Q6ZUB1 1445 aa19.84■□□□□ 0.77
NCLP1-201ENST00000445357 HNRNPMP52272 730 aaKnown RBP eCLIP19.84■□□□□ 0.77
NCLP1-201ENST00000445357 PLEKHH2Q8IVE3 1493 aa19.84■□□□□ 0.77
NCLP1-201ENST00000445357 PLXNC1O60486 1568 aa19.83■□□□□ 0.77
NCLP1-201ENST00000445357 NUP155O75694 1391 aa19.83■□□□□ 0.77
NCLP1-201ENST00000445357 UNC13BO14795 1591 aa19.82■□□□□ 0.76
NCLP1-201ENST00000445357 ARHGEF12Q9NZN5 1544 aa19.81■□□□□ 0.76
NCLP1-201ENST00000445357 CNTLNQ9NXG0 1405 aa19.81■□□□□ 0.76
NCLP1-201ENST00000445357 CCDC7Q96M83 1385 aa19.8■□□□□ 0.76
NCLP1-201ENST00000445357 UHRF1BP1Q6BDS2 1440 aa19.78■□□□□ 0.76
NCLP1-201ENST00000445357 FAM135AQ9P2D6 1515 aa19.77■□□□□ 0.76
NCLP1-201ENST00000445357 PLCH2O75038 1416 aa19.74■□□□□ 0.75
NCLP1-201ENST00000445357 KDM5CP41229 1560 aa19.74■□□□□ 0.75
NCLP1-201ENST00000445357 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
NCLP1-201ENST00000445357 IQGAP3Q86VI3 1631 aa19.73■□□□□ 0.75
NCLP1-201ENST00000445357 C11orf95C9JLR9 678 aaPredicted RBP19.72■□□□□ 0.75
NCLP1-201ENST00000445357 ABCC1P33527 1531 aa19.72■□□□□ 0.75
NCLP1-201ENST00000445357 ARAP3Q8WWN8 1544 aa19.72■□□□□ 0.75
NCLP1-201ENST00000445357 DUOX2Q9NRD8 1548 aa19.71■□□□□ 0.75
NCLP1-201ENST00000445357 MAGI2Q86UL8 1455 aa19.7■□□□□ 0.74
NCLP1-201ENST00000445357 SUPT16HQ9Y5B9 1047 aaKnown RBP19.7■□□□□ 0.74
NCLP1-201ENST00000445357 BCORL1Q5H9F3 1711 aa19.69■□□□□ 0.74
NCLP1-201ENST00000445357 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
NCLP1-201ENST00000445357 USP47Q96K76 1375 aa19.67■□□□□ 0.74
NCLP1-201ENST00000445357 ERBINQ96RT1 1412 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms