RNA–Protein interactions for RNA: ENST00000444547.6

SMG7-206, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG7, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-206ENST00000444547 ILDR2Q71H61 639 aa30.08■■■□□ 2.41
SMG7-206ENST00000444547 SIGLEC1Q9BZZ2 1709 aa30.08■■■□□ 2.41
SMG7-206ENST00000444547 HECW1Q76N89 1606 aa30.07■■■□□ 2.4
SMG7-206ENST00000444547 SCAPERQ9BY12 1400 aa30.06■■■□□ 2.4
SMG7-206ENST00000444547 CEBPAP49715 358 aaPredicted RBP30.02■■■□□ 2.4
SMG7-206ENST00000444547 ATP10AO60312 1499 aa30.01■■■□□ 2.4
SMG7-206ENST00000444547 PREX1Q8TCU6 1659 aa30■■■□□ 2.39
SMG7-206ENST00000444547 C9orf84Q5VXU9 1444 aa29.99■■■□□ 2.39
SMG7-206ENST00000444547 ARHGEF12Q9NZN5 1544 aa29.99■■■□□ 2.39
SMG7-206ENST00000444547 PLCH2O75038 1416 aa29.98■■■□□ 2.39
SMG7-206ENST00000444547 EFCAB2Q5VUJ9 269 aa29.96■■■□□ 2.39
SMG7-206ENST00000444547 UHRF1BP1Q6BDS2 1440 aa29.95■■■□□ 2.38
SMG7-206ENST00000444547 MYT1LQ9UL68 1186 aa29.94■■■□□ 2.38
SMG7-206ENST00000444547 ATP1B4Q9UN42 357 aaPredicted RBP29.91■■■□□ 2.38
SMG7-206ENST00000444547 CDK13Q14004 1512 aaKnown RBP29.91■■■□□ 2.38
SMG7-206ENST00000444547 EEA1Q15075 1411 aa29.86■■■□□ 2.37
SMG7-206ENST00000444547 STRCQ7RTU9 1775 aa29.85■■■□□ 2.37
SMG7-206ENST00000444547 ESF1Q9H501 851 aaKnown RBP29.85■■■□□ 2.37
SMG7-206ENST00000444547 CDK11AQ9UQ88 783 aaPredicted RBP29.85■■■□□ 2.37
SMG7-206ENST00000444547 SPATA31D1Q6ZQQ2 1576 aa29.84■■■□□ 2.37
SMG7-206ENST00000444547 ZNF518AQ6AHZ1 1483 aa29.83■■■□□ 2.37
SMG7-206ENST00000444547 AFAP1Q8N556 730 aa29.81■■■□□ 2.36
SMG7-206ENST00000444547 PTPRTO14522 1441 aa29.8■■■□□ 2.36
SMG7-206ENST00000444547 SETD1BQ9UPS6 1966 aaKnown RBP29.79■■■□□ 2.36
SMG7-206ENST00000444547 MYO5CQ9NQX4 1742 aa29.79■■■□□ 2.36
SMG7-206ENST00000444547 ARHGAP5Q13017 1502 aa29.75■■■□□ 2.35
SMG7-206ENST00000444547 FMN1Q68DA7 1419 aa29.71■■■□□ 2.35
SMG7-206ENST00000444547 KDM5CP41229 1560 aa29.69■■■□□ 2.34
SMG7-206ENST00000444547 KIF14Q15058 1648 aa29.69■■■□□ 2.34
SMG7-206ENST00000444547 TRAPPC8Q9Y2L5 1435 aa29.68■■■□□ 2.34
SMG7-206ENST00000444547 CLIP1P30622 1438 aa29.67■■■□□ 2.34
SMG7-206ENST00000444547 DIP2CQ9Y2E4 1556 aa29.67■■■□□ 2.34
SMG7-206ENST00000444547 IQSEC2Q5JU85 1478 aa29.66■■■□□ 2.34
SMG7-206ENST00000444547 C3P01024 1663 aa29.66■■■□□ 2.34
SMG7-206ENST00000444547 REREQ9P2R6 1566 aa29.64■■■□□ 2.34
SMG7-206ENST00000444547 LTBP4Q8N2S1 1624 aa29.64■■■□□ 2.34
SMG7-206ENST00000444547 TROQ12816 1431 aaPredicted RBP29.64■■■□□ 2.34
SMG7-206ENST00000444547 UBTFP17480 764 aaKnown RBP29.63■■■□□ 2.33
SMG7-206ENST00000444547 EHMT2Q96KQ7 1210 aa29.62■■■□□ 2.33
SMG7-206ENST00000444547 MLH3Q9UHC1 1453 aa29.61■■■□□ 2.33
SMG7-206ENST00000444547 NCOA1Q15788 1441 aa29.61■■■□□ 2.33
SMG7-206ENST00000444547 CNTLNQ9NXG0 1405 aa29.59■■■□□ 2.33
SMG7-206ENST00000444547 ABCA6Q8N139 1617 aa29.59■■■□□ 2.33
SMG7-206ENST00000444547 AGLP35573 1532 aa29.58■■■□□ 2.33
SMG7-206ENST00000444547 UBAP1LF5GYI3 381 aa29.55■■■□□ 2.32
SMG7-206ENST00000444547 CAMSAP1Q5T5Y3 1602 aa29.51■■■□□ 2.31
SMG7-206ENST00000444547 ARHGAP35Q9NRY4 1499 aa29.5■■■□□ 2.31
SMG7-206ENST00000444547 NCKAP5LQ9HCH0 1330 aa29.48■■■□□ 2.31
SMG7-206ENST00000444547 NPATQ14207 1427 aa29.48■■■□□ 2.31
SMG7-206ENST00000444547 ZNF335Q9H4Z2 1342 aaPredicted RBP29.47■■■□□ 2.31
SMG7-206ENST00000444547 ABCC1P33527 1531 aa29.47■■■□□ 2.31
SMG7-206ENST00000444547 CDC42BPBQ9Y5S2 1711 aa29.47■■■□□ 2.31
SMG7-206ENST00000444547 ZMYM3Q14202 1370 aa29.44■■■□□ 2.3
SMG7-206ENST00000444547 PKD2Q13563 968 aa29.42■■■□□ 2.3
SMG7-206ENST00000444547 PREX2Q70Z35 1606 aa29.42■■■□□ 2.3
SMG7-206ENST00000444547 ITSN2Q9NZM3 1697 aa29.41■■■□□ 2.3
SMG7-206ENST00000444547 ZNF777Q9ULD5 760 aaPredicted RBP29.4■■■□□ 2.3
SMG7-206ENST00000444547 KIDINS220Q9ULH0 1771 aa29.39■■■□□ 2.3
SMG7-206ENST00000444547 MROH2AA6NES4 1674 aa29.37■■■□□ 2.29
SMG7-206ENST00000444547 SPAG9O60271 1321 aaKnown RBP29.36■■■□□ 2.29
SMG7-206ENST00000444547 SCAF1Q9H7N4 1312 aaKnown RBP29.35■■■□□ 2.29
SMG7-206ENST00000444547 CCDC18Q5T9S5 1454 aa29.33■■■□□ 2.29
SMG7-206ENST00000444547 LRRIQ1Q96JM4 1722 aa29.33■■■□□ 2.29
SMG7-206ENST00000444547 PLA2R1Q13018 1463 aa29.32■■■□□ 2.28
SMG7-206ENST00000444547 PPP6R1Q9UPN7 881 aa29.32■■■□□ 2.28
SMG7-206ENST00000444547 SAMD9LQ8IVG5 1584 aa29.3■■■□□ 2.28
SMG7-206ENST00000444547 HNRNPMP52272 730 aaKnown RBP eCLIP29.28■■■□□ 2.282e-6■□□□□ 8.9
SMG7-206ENST00000444547 GGT6Q6P531 493 aa29.28■■■□□ 2.28
SMG7-206ENST00000444547 SUPT6HQ7KZ85 1726 aaKnown RBP29.27■■■□□ 2.28
SMG7-206ENST00000444547 TCOF1Q13428 1488 aaKnown RBP29.26■■■□□ 2.27
SMG7-206ENST00000444547 PIP4K2BP78356 416 aa29.26■■■□□ 2.27
SMG7-206ENST00000444547 MYO3AQ8NEV4 1616 aa29.26■■■□□ 2.27
SMG7-206ENST00000444547 CASKIN1Q8WXD9 1431 aa29.26■■■□□ 2.27
SMG7-206ENST00000444547 CEP170BQ9Y4F5 1589 aaPredicted RBP29.26■■■□□ 2.27
SMG7-206ENST00000444547 CLTCQ00610 1675 aaKnown RBP29.25■■■□□ 2.27
SMG7-206ENST00000444547 CDC42BPAQ5VT25 1732 aa29.25■■■□□ 2.27
SMG7-206ENST00000444547 HSPA1LP34931 641 aa29.24■■■□□ 2.27
SMG7-206ENST00000444547 PTPRKQ15262 1439 aa29.24■■■□□ 2.27
SMG7-206ENST00000444547 ZNF142P52746 1687 aaPredicted RBP29.24■■■□□ 2.27
SMG7-206ENST00000444547 SYCP2Q9BX26 1530 aa29.24■■■□□ 2.27
SMG7-206ENST00000444547 TOM1O60784 492 aa29.23■■■□□ 2.27
SMG7-206ENST00000444547 A2MP01023 1474 aa29.21■■■□□ 2.27
SMG7-206ENST00000444547 ATP7AQ04656 1500 aa29.2■■■□□ 2.26
SMG7-206ENST00000444547 CFDP1Q9UEE9 299 aaPredicted RBP29.17■■■□□ 2.26
SMG7-206ENST00000444547 PHF23Q9BUL5 403 aaPredicted RBP29.16■■■□□ 2.26
SMG7-206ENST00000444547 MED1Q15648 1581 aaPredicted RBP29.16■■■□□ 2.26
SMG7-206ENST00000444547 GPATCH8Q9UKJ3 1502 aaKnown RBP29.15■■■□□ 2.26
SMG7-206ENST00000444547 PLEKHH2Q8IVE3 1493 aa29.15■■■□□ 2.26
SMG7-206ENST00000444547 KIAA1107Q9UPP5 1409 aa29.14■■■□□ 2.26
SMG7-206ENST00000444547 PLXNC1O60486 1568 aa29.13■■■□□ 2.25
SMG7-206ENST00000444547 A2ML1A8K2U0 1454 aa29.12■■■□□ 2.25
SMG7-206ENST00000444547 CPS1P31327 1500 aa29.1■■■□□ 2.25
SMG7-206ENST00000444547 INO80Q9ULG1 1556 aaPredicted RBP29.09■■■□□ 2.25
SMG7-206ENST00000444547 CCNB3Q8WWL7 1395 aa29.09■■■□□ 2.25
SMG7-206ENST00000444547 FYCO1Q9BQS8 1478 aa29.09■■■□□ 2.25
SMG7-206ENST00000444547 DNMT1P26358 1616 aaKnown RBP29.06■■■□□ 2.24
SMG7-206ENST00000444547 SHANK2Q9UPX8 1470 aa29.06■■■□□ 2.24
SMG7-206ENST00000444547 ANKLE2Q86XL3 938 aa29.03■■■□□ 2.24
SMG7-206ENST00000444547 TNRQ92752 1358 aa29.02■■■□□ 2.24
SMG7-206ENST00000444547 ADGBQ8N7X0 1667 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms