RNA–Protein interactions for RNA: ENST00000444452.5

PREB-206, Transcript of prolactin regulatory element binding, humanhuman

TSL 1 (best)

Gene PREB, Length 2,030 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-206ENST00000444452 DENND4BO75064 1496 aaPredicted RBP31.98■■■□□ 2.71
PREB-206ENST00000444452 ABCA8O94911 1581 aa31.97■■■□□ 2.71
PREB-206ENST00000444452 KDM5BQ9UGL1 1544 aa31.91■■■□□ 2.7
PREB-206ENST00000444452 GPATCH8Q9UKJ3 1502 aaKnown RBP31.91■■■□□ 2.7
PREB-206ENST00000444452 KIF14Q15058 1648 aa31.9■■■□□ 2.7
PREB-206ENST00000444452 CAMSAP2Q08AD1 1489 aa31.89■■■□□ 2.7
PREB-206ENST00000444452 ZNF644Q9H582 1327 aaPredicted RBP31.89■■■□□ 2.7
PREB-206ENST00000444452 TRIM52Q96A61 297 aa31.88■■■□□ 2.69
PREB-206ENST00000444452 MPHOSPH9Q99550 1183 aa31.84■■■□□ 2.69
PREB-206ENST00000444452 CFDP1Q9UEE9 299 aaPredicted RBP31.84■■■□□ 2.69
PREB-206ENST00000444452 ATP10BO94823 1461 aa31.81■■■□□ 2.68
PREB-206ENST00000444452 ADGBQ8N7X0 1667 aa31.79■■■□□ 2.68
PREB-206ENST00000444452 CROCC2H7BZ55 1655 aa31.78■■■□□ 2.68
PREB-206ENST00000444452 ADGRL2O95490 1459 aa31.78■■■□□ 2.68
PREB-206ENST00000444452 ABCC10Q5T3U5 1492 aa31.76■■■□□ 2.68
PREB-206ENST00000444452 PLEKHD1A6NEE1 506 aa31.76■■■□□ 2.67
PREB-206ENST00000444452 DDX10Q13206 875 aaKnown RBP31.75■■■□□ 2.67
PREB-206ENST00000444452 NCOA1Q15788 1441 aa31.74■■■□□ 2.67
PREB-206ENST00000444452 CHD1O14646 1710 aa31.73■■■□□ 2.67
PREB-206ENST00000444452 CDC42BPAQ5VT25 1732 aa31.72■■■□□ 2.67
PREB-206ENST00000444452 PTPRGP23470 1445 aa31.71■■■□□ 2.67
PREB-206ENST00000444452 ANKRD30BQ9BXX2 1392 aa31.69■■■□□ 2.66
PREB-206ENST00000444452 SHROOM2Q13796 1616 aa31.68■■■□□ 2.66
PREB-206ENST00000444452 RPRD2Q5VT52 1461 aaKnown RBP31.66■■■□□ 2.66
PREB-206ENST00000444452 HIRIP3Q9BW71 556 aaPredicted RBP31.66■■■□□ 2.66
PREB-206ENST00000444452 SHANK2Q9UPX8 1470 aa31.65■■■□□ 2.66
PREB-206ENST00000444452 ZNF777Q9ULD5 760 aaPredicted RBP31.63■■■□□ 2.65
PREB-206ENST00000444452 ANKRD30AQ9BXX3 1397 aa31.63■■■□□ 2.65
PREB-206ENST00000444452 PZPP20742 1482 aa31.62■■■□□ 2.65
PREB-206ENST00000444452 SLC4A1APQ9BWU0 796 aaKnown RBP31.59■■■□□ 2.65
PREB-206ENST00000444452 FOXD1Q16676 465 aa31.59■■■□□ 2.65
PREB-206ENST00000444452 TEX14Q8IWB6 1497 aa31.56■■■□□ 2.64
PREB-206ENST00000444452 L3MBTL2Q969R5 705 aa31.56■■■□□ 2.64
PREB-206ENST00000444452 ARHGEF5Q12774 1597 aa31.54■■■□□ 2.64
PREB-206ENST00000444452 C9orf84Q5VXU9 1444 aa31.53■■■□□ 2.64
PREB-206ENST00000444452 ANKRD50Q9ULJ7 1429 aa31.52■■■□□ 2.64
PREB-206ENST00000444452 CCER2I3L3R5 266 aa31.5■■■□□ 2.63
PREB-206ENST00000444452 KCNH8Q96L42 1107 aa31.49■■■□□ 2.63
PREB-206ENST00000444452 PREX2Q70Z35 1606 aa31.49■■■□□ 2.63
PREB-206ENST00000444452 ANP32CO43423 234 aa31.48■■■□□ 2.63
PREB-206ENST00000444452 KIAA1107Q9UPP5 1409 aa31.48■■■□□ 2.63
PREB-206ENST00000444452 HSPA5P11021 654 aaKnown RBP31.46■■■□□ 2.63
PREB-206ENST00000444452 MBD5Q9P267 1494 aa31.45■■■□□ 2.63
PREB-206ENST00000444452 EIF4G2P78344 907 aaKnown RBP eCLIP31.45■■■□□ 2.63
PREB-206ENST00000444452 ABCC2Q92887 1545 aa31.44■■■□□ 2.62
PREB-206ENST00000444452 CDC42BPBQ9Y5S2 1711 aa31.43■■■□□ 2.62
PREB-206ENST00000444452 KDM5DQ9BY66 1539 aa31.42■■■□□ 2.62
PREB-206ENST00000444452 TSPY4P0CV99 314 aa31.42■■■□□ 2.62
PREB-206ENST00000444452 TSPY10P0CW01 314 aa31.42■■■□□ 2.62
PREB-206ENST00000444452 SAMD9LQ8IVG5 1584 aa31.42■■■□□ 2.62
PREB-206ENST00000444452 PELP1Q8IZL8 1130 aaKnown RBP31.39■■■□□ 2.62
PREB-206ENST00000444452 CCDC141Q6ZP82 1450 aa31.39■■■□□ 2.62
PREB-206ENST00000444452 ERCC6L2Q5T890 1561 aa31.39■■■□□ 2.62
PREB-206ENST00000444452 WASHC2AQ641Q2 1341 aa31.37■■■□□ 2.61
PREB-206ENST00000444452 CLASP1Q7Z460 1538 aa31.36■■■□□ 2.61
PREB-206ENST00000444452 RSPH4AQ5TD94 716 aa31.36■■■□□ 2.61
PREB-206ENST00000444452 NBPF8Q3BBV2 869 aa31.35■■■□□ 2.61
PREB-206ENST00000444452 KIF15Q9NS87 1388 aa31.35■■■□□ 2.61
PREB-206ENST00000444452 PKD2Q13563 968 aa31.34■■■□□ 2.61
PREB-206ENST00000444452 TTC37Q6PGP7 1564 aa31.34■■■□□ 2.61
PREB-206ENST00000444452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.33■■■□□ 2.616e-6■■□□□ 13.3
PREB-206ENST00000444452 HNRNPMP52272 730 aaKnown RBP eCLIP31.33■■■□□ 2.61
PREB-206ENST00000444452 NUP155O75694 1391 aa31.31■■■□□ 2.6
PREB-206ENST00000444452 MAST1Q9Y2H9 1570 aa31.29■■■□□ 2.6
PREB-206ENST00000444452 SPATA31E1Q6ZUB1 1445 aa31.28■■■□□ 2.6
PREB-206ENST00000444452 ARHGAP5Q13017 1502 aa31.26■■■□□ 2.6
PREB-206ENST00000444452 UHRF1BP1LA0JNW5 1464 aa31.26■■■□□ 2.6
PREB-206ENST00000444452 SYCP2Q9BX26 1530 aa31.25■■■□□ 2.59
PREB-206ENST00000444452 MYO5CQ9NQX4 1742 aa31.25■■■□□ 2.59
PREB-206ENST00000444452 PLEKHH2Q8IVE3 1493 aa31.23■■■□□ 2.59
PREB-206ENST00000444452 CNTLNQ9NXG0 1405 aa31.23■■■□□ 2.59
PREB-206ENST00000444452 CCDC7Q96M83 1385 aa31.22■■■□□ 2.59
PREB-206ENST00000444452 POLR1AO95602 1720 aaPredicted RBP31.2■■■□□ 2.58
PREB-206ENST00000444452 ZCCHC11Q5TAX3 1644 aaKnown RBP31.19■■■□□ 2.58
PREB-206ENST00000444452 ARHGEF12Q9NZN5 1544 aa31.18■■■□□ 2.58
PREB-206ENST00000444452 UHRF1BP1Q6BDS2 1440 aa31.16■■■□□ 2.58
PREB-206ENST00000444452 PLXNC1O60486 1568 aa31.16■■■□□ 2.58
PREB-206ENST00000444452 C11orf95C9JLR9 678 aaPredicted RBP31.14■■■□□ 2.58
PREB-206ENST00000444452 FAM135AQ9P2D6 1515 aa31.14■■■□□ 2.58
PREB-206ENST00000444452 SUPT16HQ9Y5B9 1047 aaKnown RBP31.12■■■□□ 2.57
PREB-206ENST00000444452 UNC13BO14795 1591 aa31.12■■■□□ 2.57
PREB-206ENST00000444452 PLCH2O75038 1416 aa31.11■■■□□ 2.57
PREB-206ENST00000444452 RALGAPBQ86X10 1494 aa31.08■■■□□ 2.57
PREB-206ENST00000444452 KIF7Q2M1P5 1343 aa31.06■■■□□ 2.56
PREB-206ENST00000444452 KDM5CP41229 1560 aa31.05■■■□□ 2.56
PREB-206ENST00000444452 USP47Q96K76 1375 aa31.04■■■□□ 2.56
PREB-206ENST00000444452 DUOX2Q9NRD8 1548 aa31.03■■■□□ 2.56
PREB-206ENST00000444452 ABCC1P33527 1531 aa31.02■■■□□ 2.56
PREB-206ENST00000444452 ARAP3Q8WWN8 1544 aa31■■■□□ 2.55
PREB-206ENST00000444452 EFCAB2Q5VUJ9 269 aa31■■■□□ 2.55
PREB-206ENST00000444452 IQGAP3Q86VI3 1631 aa30.99■■■□□ 2.55
PREB-206ENST00000444452 ERBINQ96RT1 1412 aa30.98■■■□□ 2.55
PREB-206ENST00000444452 MAGI2Q86UL8 1455 aa30.97■■■□□ 2.55
PREB-206ENST00000444452 ARID4BQ4LE39 1312 aaPredicted RBP30.97■■■□□ 2.55
PREB-206ENST00000444452 ZNF326Q5BKZ1 582 aaKnown RBP30.97■■■□□ 2.55
PREB-206ENST00000444452 PRKRIP1Q9H875 184 aaPredicted RBP30.96■■■□□ 2.55
PREB-206ENST00000444452 BCORL1Q5H9F3 1711 aa30.94■■■□□ 2.54
PREB-206ENST00000444452 CCDC144AA2RUR9 1427 aa30.93■■■□□ 2.54
PREB-206ENST00000444452 PLA2R1Q13018 1463 aa30.89■■■□□ 2.54
PREB-206ENST00000444452 TRAPPC8Q9Y2L5 1435 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms