RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 PREX1Q8TCU6 1659 aa17.24■□□□□ 0.35
COMMD1-203ENST00000444166 MLECQ14165 292 aa17.24■□□□□ 0.35
COMMD1-203ENST00000444166 STRCQ7RTU9 1775 aa17.22■□□□□ 0.35
COMMD1-203ENST00000444166 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.35
COMMD1-203ENST00000444166 ATP10AO60312 1499 aa17.21■□□□□ 0.35
COMMD1-203ENST00000444166 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
COMMD1-203ENST00000444166 PLCH2O75038 1416 aa17.2■□□□□ 0.34
COMMD1-203ENST00000444166 C9orf84Q5VXU9 1444 aa17.2■□□□□ 0.34
COMMD1-203ENST00000444166 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
COMMD1-203ENST00000444166 CEBPAP49715 358 aaPredicted RBP17.17■□□□□ 0.34
COMMD1-203ENST00000444166 SETD1BQ9UPS6 1966 aaKnown RBP17.16■□□□□ 0.34
COMMD1-203ENST00000444166 SPATA31D1Q6ZQQ2 1576 aa17.15■□□□□ 0.34
COMMD1-203ENST00000444166 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
COMMD1-203ENST00000444166 UHRF1BP1Q6BDS2 1440 aa17.14■□□□□ 0.33
COMMD1-203ENST00000444166 PTPRTO14522 1441 aa17.13■□□□□ 0.33
COMMD1-203ENST00000444166 RANGAP1P46060 587 aaPredicted RBP17.13■□□□□ 0.33
COMMD1-203ENST00000444166 KDM5CP41229 1560 aa17.11■□□□□ 0.33
COMMD1-203ENST00000444166 LTBP4Q8N2S1 1624 aa17.1■□□□□ 0.33
COMMD1-203ENST00000444166 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
COMMD1-203ENST00000444166 ZNF518AQ6AHZ1 1483 aa17.09■□□□□ 0.33
COMMD1-203ENST00000444166 REREQ9P2R6 1566 aa17.08■□□□□ 0.32
COMMD1-203ENST00000444166 MYO5CQ9NQX4 1742 aa17.07■□□□□ 0.32
COMMD1-203ENST00000444166 IQSEC2Q5JU85 1478 aa17.07■□□□□ 0.32
COMMD1-203ENST00000444166 EEA1Q15075 1411 aa17.07■□□□□ 0.32
COMMD1-203ENST00000444166 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
COMMD1-203ENST00000444166 C3P01024 1663 aa17.05■□□□□ 0.32
COMMD1-203ENST00000444166 AFAP1Q8N556 730 aa17.04■□□□□ 0.32
COMMD1-203ENST00000444166 NCOA1Q15788 1441 aa17.03■□□□□ 0.32
COMMD1-203ENST00000444166 KIF14Q15058 1648 aa17.03■□□□□ 0.32
COMMD1-203ENST00000444166 AGLP35573 1532 aa17.02■□□□□ 0.32
COMMD1-203ENST00000444166 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.31
COMMD1-203ENST00000444166 MLH3Q9UHC1 1453 aa17.01■□□□□ 0.31
COMMD1-203ENST00000444166 ABCA6Q8N139 1617 aa17.01■□□□□ 0.31
COMMD1-203ENST00000444166 ARHGAP5Q13017 1502 aa17■□□□□ 0.31
COMMD1-203ENST00000444166 TROQ12816 1431 aaPredicted RBP16.99■□□□□ 0.31
COMMD1-203ENST00000444166 FMN1Q68DA7 1419 aa16.97■□□□□ 0.31
COMMD1-203ENST00000444166 CDK11AQ9UQ88 783 aaPredicted RBP16.96■□□□□ 0.31
COMMD1-203ENST00000444166 CNTLNQ9NXG0 1405 aa16.96■□□□□ 0.3
COMMD1-203ENST00000444166 CDC42BPBQ9Y5S2 1711 aa16.93■□□□□ 0.3
COMMD1-203ENST00000444166 ABCC1P33527 1531 aa16.93■□□□□ 0.3
COMMD1-203ENST00000444166 NPATQ14207 1427 aa16.93■□□□□ 0.3
COMMD1-203ENST00000444166 ARHGAP35Q9NRY4 1499 aa16.93■□□□□ 0.3
COMMD1-203ENST00000444166 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
COMMD1-203ENST00000444166 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
COMMD1-203ENST00000444166 CLIP1P30622 1438 aa16.92■□□□□ 0.3
COMMD1-203ENST00000444166 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
COMMD1-203ENST00000444166 ATP1B4Q9UN42 357 aaPredicted RBP16.91■□□□□ 0.3
COMMD1-203ENST00000444166 KIDINS220Q9ULH0 1771 aa16.91■□□□□ 0.3
COMMD1-203ENST00000444166 ZNF335Q9H4Z2 1342 aaPredicted RBP16.9■□□□□ 0.3
COMMD1-203ENST00000444166 PREX2Q70Z35 1606 aa16.89■□□□□ 0.29
COMMD1-203ENST00000444166 MROH2AA6NES4 1674 aa16.89■□□□□ 0.29
COMMD1-203ENST00000444166 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
COMMD1-203ENST00000444166 LRRIQ1Q96JM4 1722 aa16.88■□□□□ 0.29
COMMD1-203ENST00000444166 UBAP1LF5GYI3 381 aa16.87■□□□□ 0.29
COMMD1-203ENST00000444166 PLA2R1Q13018 1463 aa16.86■□□□□ 0.29
COMMD1-203ENST00000444166 NCKAP5LQ9HCH0 1330 aa16.86■□□□□ 0.29
COMMD1-203ENST00000444166 ZMYM3Q14202 1370 aa16.86■□□□□ 0.29
COMMD1-203ENST00000444166 TCOF1Q13428 1488 aaKnown RBP16.85■□□□□ 0.29
COMMD1-203ENST00000444166 ZNF142P52746 1687 aaPredicted RBP16.85■□□□□ 0.29
COMMD1-203ENST00000444166 SAMD9LQ8IVG5 1584 aa16.83■□□□□ 0.28
COMMD1-203ENST00000444166 PKD2Q13563 968 aa16.82■□□□□ 0.28
COMMD1-203ENST00000444166 MYO3AQ8NEV4 1616 aa16.81■□□□□ 0.28
COMMD1-203ENST00000444166 PTPRKQ15262 1439 aa16.8■□□□□ 0.28
COMMD1-203ENST00000444166 CDC42BPAQ5VT25 1732 aa16.8■□□□□ 0.28
COMMD1-203ENST00000444166 CEP170BQ9Y4F5 1589 aaPredicted RBP16.8■□□□□ 0.28
COMMD1-203ENST00000444166 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
COMMD1-203ENST00000444166 PLXNC1O60486 1568 aa16.79■□□□□ 0.28
COMMD1-203ENST00000444166 MED1Q15648 1581 aaPredicted RBP16.77■□□□□ 0.28
COMMD1-203ENST00000444166 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.28
COMMD1-203ENST00000444166 CLTCQ00610 1675 aaKnown RBP16.77■□□□□ 0.28
COMMD1-203ENST00000444166 SYCP2Q9BX26 1530 aa16.76■□□□□ 0.27
COMMD1-203ENST00000444166 CASKIN1Q8WXD9 1431 aa16.76■□□□□ 0.27
COMMD1-203ENST00000444166 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
COMMD1-203ENST00000444166 SPAG9O60271 1321 aaKnown RBP16.75■□□□□ 0.27
COMMD1-203ENST00000444166 HSPA1LP34931 641 aa16.75■□□□□ 0.27
COMMD1-203ENST00000444166 PPP6R1Q9UPN7 881 aa16.75■□□□□ 0.27
COMMD1-203ENST00000444166 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
COMMD1-203ENST00000444166 INO80Q9ULG1 1556 aaPredicted RBP16.74■□□□□ 0.27
COMMD1-203ENST00000444166 EHMT2Q96KQ7 1210 aa16.73■□□□□ 0.27
COMMD1-203ENST00000444166 GPATCH8Q9UKJ3 1502 aaKnown RBP16.73■□□□□ 0.27
COMMD1-203ENST00000444166 A2MP01023 1474 aa16.73■□□□□ 0.27
COMMD1-203ENST00000444166 KIAA1107Q9UPP5 1409 aa16.72■□□□□ 0.27
COMMD1-203ENST00000444166 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
COMMD1-203ENST00000444166 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.26
COMMD1-203ENST00000444166 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
COMMD1-203ENST00000444166 CPS1P31327 1500 aa16.7■□□□□ 0.26
COMMD1-203ENST00000444166 NEURL4Q96JN8 1562 aa16.69■□□□□ 0.26
COMMD1-203ENST00000444166 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
COMMD1-203ENST00000444166 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
COMMD1-203ENST00000444166 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
COMMD1-203ENST00000444166 TOM1O60784 492 aa16.67■□□□□ 0.26
COMMD1-203ENST00000444166 PIP4K2BP78356 416 aa16.67■□□□□ 0.26
COMMD1-203ENST00000444166 GGT6Q6P531 493 aa16.67■□□□□ 0.26
COMMD1-203ENST00000444166 ALKQ9UM73 1620 aa16.66■□□□□ 0.26
COMMD1-203ENST00000444166 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
COMMD1-203ENST00000444166 POLR1AO95602 1720 aaPredicted RBP16.65■□□□□ 0.26
COMMD1-203ENST00000444166 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
COMMD1-203ENST00000444166 ADGBQ8N7X0 1667 aa16.63■□□□□ 0.25
COMMD1-203ENST00000444166 VWDEQ8N2E2 1590 aa16.63■□□□□ 0.25
COMMD1-203ENST00000444166 CFDP1Q9UEE9 299 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms