RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 ABCC8Q09428 1581 aa12.96□□□□□ -0.33
EPHA4-209ENST00000443796 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
EPHA4-209ENST00000443796 DNMBPQ6XZF7 1577 aa12.95□□□□□ -0.34
EPHA4-209ENST00000443796 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
EPHA4-209ENST00000443796 BMP2KQ9NSY1 1161 aaPredicted RBP12.95□□□□□ -0.34
EPHA4-209ENST00000443796 DCBLD2Q96PD2 775 aa12.94□□□□□ -0.34
EPHA4-209ENST00000443796 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
EPHA4-209ENST00000443796 CCDC88BA6NC98 1476 aa12.9□□□□□ -0.34
EPHA4-209ENST00000443796 POLA1P09884 1462 aaPredicted RBP12.9□□□□□ -0.34
EPHA4-209ENST00000443796 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
EPHA4-209ENST00000443796 EFCAB3Q8N7B9 438 aa12.89□□□□□ -0.35
EPHA4-209ENST00000443796 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
EPHA4-209ENST00000443796 SNAPC4Q5SXM2 1469 aa12.89□□□□□ -0.35
EPHA4-209ENST00000443796 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
EPHA4-209ENST00000443796 RAD54L2Q9Y4B4 1467 aa12.88□□□□□ -0.35
EPHA4-209ENST00000443796 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
EPHA4-209ENST00000443796 ATMINO43313 823 aaPredicted RBP12.87□□□□□ -0.35
EPHA4-209ENST00000443796 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
EPHA4-209ENST00000443796 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
EPHA4-209ENST00000443796 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
EPHA4-209ENST00000443796 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
EPHA4-209ENST00000443796 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
EPHA4-209ENST00000443796 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
EPHA4-209ENST00000443796 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
EPHA4-209ENST00000443796 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
EPHA4-209ENST00000443796 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
EPHA4-209ENST00000443796 PLCB2Q00722 1185 aa12.83□□□□□ -0.36
EPHA4-209ENST00000443796 SOGA1O94964 1423 aa12.81□□□□□ -0.36
EPHA4-209ENST00000443796 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
EPHA4-209ENST00000443796 SOX12O15370 315 aa12.81□□□□□ -0.36
EPHA4-209ENST00000443796 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
EPHA4-209ENST00000443796 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
EPHA4-209ENST00000443796 WDR97A6NE52 1622 aa12.78□□□□□ -0.36
EPHA4-209ENST00000443796 NLRP6P59044 892 aa12.78□□□□□ -0.36
EPHA4-209ENST00000443796 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
EPHA4-209ENST00000443796 GTPBP6O43824 516 aaPredicted RBP12.77□□□□□ -0.37
EPHA4-209ENST00000443796 MFRPQ9BY79 579 aa12.77□□□□□ -0.37
EPHA4-209ENST00000443796 GRIN2BQ13224 1484 aa12.76□□□□□ -0.37
EPHA4-209ENST00000443796 ERCC6L2Q5T890 1561 aa12.76□□□□□ -0.37
EPHA4-209ENST00000443796 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
EPHA4-209ENST00000443796 PELP1Q8IZL8 1130 aaKnown RBP12.75□□□□□ -0.37
EPHA4-209ENST00000443796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.37
EPHA4-209ENST00000443796 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
EPHA4-209ENST00000443796 FGD5Q6ZNL6 1462 aa12.73□□□□□ -0.37
EPHA4-209ENST00000443796 HAP1P54257 671 aaPredicted RBP12.72□□□□□ -0.37
EPHA4-209ENST00000443796 KDM4FA0A1W2PPD8 638 aa12.71□□□□□ -0.37
EPHA4-209ENST00000443796 IER5LQ5T953 404 aa12.71□□□□□ -0.37
EPHA4-209ENST00000443796 FBXO22Q8NEZ5 403 aa12.7□□□□□ -0.38
EPHA4-209ENST00000443796 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
EPHA4-209ENST00000443796 SEC24BO95487 1268 aa12.69□□□□□ -0.38
EPHA4-209ENST00000443796 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
EPHA4-209ENST00000443796 C7P10643 843 aa12.67□□□□□ -0.38
EPHA4-209ENST00000443796 PLCG2P16885 1265 aa12.67□□□□□ -0.38
EPHA4-209ENST00000443796 OCEL1Q9H607 264 aa12.66□□□□□ -0.38
EPHA4-209ENST00000443796 CUX1P39880 1505 aa12.66□□□□□ -0.38
EPHA4-209ENST00000443796 CEP170Q5SW79 1584 aa12.65□□□□□ -0.38
EPHA4-209ENST00000443796 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
EPHA4-209ENST00000443796 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
EPHA4-209ENST00000443796 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
EPHA4-209ENST00000443796 IRX5P78411 483 aaPredicted RBP12.64□□□□□ -0.39
EPHA4-209ENST00000443796 PPP1R37O75864 691 aa12.63□□□□□ -0.39
EPHA4-209ENST00000443796 DPY19L2Q6NUT2 758 aa12.62□□□□□ -0.39
EPHA4-209ENST00000443796 TSHZ2Q9NRE2 1034 aa12.62□□□□□ -0.39
EPHA4-209ENST00000443796 COLQQ9Y215 455 aaPredicted RBP12.61□□□□□ -0.39
EPHA4-209ENST00000443796 GRIN2AQ12879 1464 aa12.6□□□□□ -0.39
EPHA4-209ENST00000443796 SHROOM2Q13796 1616 aa12.6□□□□□ -0.39
EPHA4-209ENST00000443796 PDCD7Q8N8D1 485 aaKnown RBP12.6□□□□□ -0.39
EPHA4-209ENST00000443796 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
EPHA4-209ENST00000443796 FAM69CQ0P6D2 419 aa12.59□□□□□ -0.39
EPHA4-209ENST00000443796 NUP160Q12769 1436 aa12.59□□□□□ -0.39
EPHA4-209ENST00000443796 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
EPHA4-209ENST00000443796 G3V3G9 751 aa12.57□□□□□ -0.4
EPHA4-209ENST00000443796 ABCA10Q8WWZ4 1543 aa12.56□□□□□ -0.4
EPHA4-209ENST00000443796 KDM6BO15054 1643 aa12.55□□□□□ -0.4
EPHA4-209ENST00000443796 POTEFA5A3E0 1075 aa12.55□□□□□ -0.4
EPHA4-209ENST00000443796 ADAMTS12P58397 1594 aa12.54□□□□□ -0.4
EPHA4-209ENST00000443796 DIP2BQ9P265 1576 aa12.54□□□□□ -0.4
EPHA4-209ENST00000443796 L3MBTL3Q96JM7 780 aaPredicted RBP12.53□□□□□ -0.4
EPHA4-209ENST00000443796 MAPKBP1O60336 1514 aa12.52□□□□□ -0.41
EPHA4-209ENST00000443796 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
EPHA4-209ENST00000443796 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
EPHA4-209ENST00000443796 TSPOAP1O95153 1857 aa12.48□□□□□ -0.41
EPHA4-209ENST00000443796 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
EPHA4-209ENST00000443796 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
EPHA4-209ENST00000443796 FHAD1B1AJZ9 1412 aa12.46□□□□□ -0.41
EPHA4-209ENST00000443796 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
EPHA4-209ENST00000443796 JPH4Q96JJ6 628 aa12.46□□□□□ -0.41
EPHA4-209ENST00000443796 ADGRL1O94910 1474 aa12.46□□□□□ -0.42
EPHA4-209ENST00000443796 ADCY10Q96PN6 1610 aa12.45□□□□□ -0.42
EPHA4-209ENST00000443796 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
EPHA4-209ENST00000443796 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.42
EPHA4-209ENST00000443796 TMEM121BQ9BXQ6 578 aaPredicted RBP12.4□□□□□ -0.42
EPHA4-209ENST00000443796 KDM2AQ9Y2K7 1162 aa12.4□□□□□ -0.42
EPHA4-209ENST00000443796 WRNQ14191 1432 aaPredicted RBP eCLIP12.39□□□□□ -0.43
EPHA4-209ENST00000443796 ERICH3Q5RHP9 1530 aa12.38□□□□□ -0.43
EPHA4-209ENST00000443796 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
EPHA4-209ENST00000443796 PDE4AP27815 886 aa12.37□□□□□ -0.43
EPHA4-209ENST00000443796 WDR70Q9NW82 654 aa12.37□□□□□ -0.43
EPHA4-209ENST00000443796 POTEB2H3BUK9 544 aa12.36□□□□□ -0.43
EPHA4-209ENST00000443796 FBXO41Q8TF61 875 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms