RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TPM2P07951 284 aa6.46□□□□□ -1.38
HERC1-201ENST00000443617 ARID4BQ4LE39 1312 aaPredicted RBP6.46□□□□□ -1.38
HERC1-201ENST00000443617 FHAD1B1AJZ9 1412 aa6.45□□□□□ -1.38
HERC1-201ENST00000443617 CNTLNQ9NXG0 1405 aa6.45□□□□□ -1.38
HERC1-201ENST00000443617 BAZ1AQ9NRL2 1556 aaPredicted RBP6.45□□□□□ -1.38
HERC1-201ENST00000443617 ARAP1Q96P48 1450 aa6.44□□□□□ -1.38
HERC1-201ENST00000443617 TOP2AP11388 1531 aaKnown RBP6.44□□□□□ -1.38
HERC1-201ENST00000443617 WIZO95785 1651 aa6.44□□□□□ -1.38
HERC1-201ENST00000443617 RRAGDQ9NQL2 400 aaPredicted RBP6.44□□□□□ -1.38
HERC1-201ENST00000443617 NLRP13Q86W25 1043 aa6.44□□□□□ -1.38
HERC1-201ENST00000443617 MTUS2Q5JR59 1369 aa6.44□□□□□ -1.38
HERC1-201ENST00000443617 SPRYD3Q8NCJ5 442 aa6.43□□□□□ -1.38
HERC1-201ENST00000443617 NCLP19338 710 aaKnown RBP6.43□□□□□ -1.38
HERC1-201ENST00000443617 MRE11P49959 708 aa6.43□□□□□ -1.38
HERC1-201ENST00000443617 MYH16Q9H6N6 1097 aa6.43□□□□□ -1.38
HERC1-201ENST00000443617 KDM2AQ9Y2K7 1162 aa6.43□□□□□ -1.38
HERC1-201ENST00000443617 CARD11Q9BXL7 1154 aa6.43□□□□□ -1.38
HERC1-201ENST00000443617 XRCC6P12956 609 aaKnown RBP eCLIP6.42□□□□□ -1.381e-6■■■□□ 15.3
HERC1-201ENST00000443617 KTN1Q86UP2 1357 aaKnown RBP6.42□□□□□ -1.38
HERC1-201ENST00000443617 MAPKBP1O60336 1514 aa6.42□□□□□ -1.38
HERC1-201ENST00000443617 A0A0U1RQG5 324 aaPredicted RBP6.42□□□□□ -1.38
HERC1-201ENST00000443617 MYBBP1AQ9BQG0 1328 aaKnown RBP6.42□□□□□ -1.38
HERC1-201ENST00000443617 CARMIL1Q5VZK9 1371 aa6.41□□□□□ -1.38
HERC1-201ENST00000443617 ESPNB1AK53 854 aa6.41□□□□□ -1.38
HERC1-201ENST00000443617 ARHGAP35Q9NRY4 1499 aa6.41□□□□□ -1.38
HERC1-201ENST00000443617 ROCK2O75116 1388 aaKnown RBP6.41□□□□□ -1.38
HERC1-201ENST00000443617 WDR43Q15061 677 aaKnown RBP eCLIP6.41□□□□□ -1.382e-6■■□□□ 14.3
HERC1-201ENST00000443617 NBPF8Q3BBV2 869 aa6.41□□□□□ -1.38
HERC1-201ENST00000443617 CDCA7LQ96GN5 454 aa6.41□□□□□ -1.38
HERC1-201ENST00000443617 SKAP1Q86WV1 359 aa6.41□□□□□ -1.38
HERC1-201ENST00000443617 KIF15Q9NS87 1388 aa6.41□□□□□ -1.38
HERC1-201ENST00000443617 BRD4O60885 1362 aaPredicted RBP6.41□□□□□ -1.38
HERC1-201ENST00000443617 CC2D1BQ5T0F9 858 aaKnown RBP6.41□□□□□ -1.38
HERC1-201ENST00000443617 FAM13BQ9NYF5 915 aa6.41□□□□□ -1.38
HERC1-201ENST00000443617 DDX11L8A8MPP1 907 aa6.4□□□□□ -1.38
HERC1-201ENST00000443617 ARID3CA6NKF2 412 aa6.4□□□□□ -1.38
HERC1-201ENST00000443617 UACAQ9BZF9 1416 aa6.4□□□□□ -1.38
HERC1-201ENST00000443617 MCM4P33991 863 aa6.4□□□□□ -1.39
HERC1-201ENST00000443617 FMN1Q68DA7 1419 aa6.4□□□□□ -1.39
HERC1-201ENST00000443617 MAP7D2Q96T17 732 aa6.4□□□□□ -1.39
HERC1-201ENST00000443617 SLC24A1O60721 1099 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 CLCN1P35523 988 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 HSCBQ8IWL3 235 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 PLEKHG5O94827 1062 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 TRAK2O60296 914 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 PDCL3Q9H2J4 239 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 GBP4Q96PP9 640 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 GOLGA6L22H0YM25 854 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 NACADO15069 1562 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 IGF1RP08069 1367 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 NCOA1Q15788 1441 aa6.39□□□□□ -1.39
HERC1-201ENST00000443617 SKOR2Q2VWA4 1001 aaPredicted RBP6.39□□□□□ -1.39
HERC1-201ENST00000443617 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.38□□□□□ -1.39
HERC1-201ENST00000443617 MAPK8IP3Q9UPT6 1336 aa6.38□□□□□ -1.39
HERC1-201ENST00000443617 PTMSP20962 102 aa6.38□□□□□ -1.39
HERC1-201ENST00000443617 C20orf194Q5TEA3 1177 aa6.38□□□□□ -1.39
HERC1-201ENST00000443617 RBM10P98175 930 aaKnown RBP6.38□□□□□ -1.39
HERC1-201ENST00000443617 RWDD1Q9H446 243 aaPredicted RBP6.38□□□□□ -1.39
HERC1-201ENST00000443617 KNSTRNQ9Y448 316 aa6.37□□□□□ -1.39
HERC1-201ENST00000443617 USP47Q96K76 1375 aa6.37□□□□□ -1.39
HERC1-201ENST00000443617 LRRC9Q6ZRR7 1453 aa6.37□□□□□ -1.39
HERC1-201ENST00000443617 CHMP5Q9NZZ3 219 aa6.37□□□□□ -1.39
HERC1-201ENST00000443617 CALD1Q05682 793 aaKnown RBP6.37□□□□□ -1.39
HERC1-201ENST00000443617 PRXQ9BXM0 1461 aa6.37□□□□□ -1.39
HERC1-201ENST00000443617 ISY1Q9ULR0 285 aaKnown RBP6.37□□□□□ -1.39
HERC1-201ENST00000443617 MSNP26038 577 aaKnown RBP6.36□□□□□ -1.39
HERC1-201ENST00000443617 KIAA1211Q6ZU35 1233 aa6.36□□□□□ -1.39
HERC1-201ENST00000443617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.36□□□□□ -1.39
HERC1-201ENST00000443617 FSD2A1L4K1 749 aa6.36□□□□□ -1.39
HERC1-201ENST00000443617 PTMAP06454 111 aaKnown RBP6.36□□□□□ -1.39
HERC1-201ENST00000443617 GOLGA2Q08379 1002 aa6.36□□□□□ -1.39
HERC1-201ENST00000443617 HFM1A2PYH4 1435 aa6.36□□□□□ -1.39
HERC1-201ENST00000443617 ST20-MTHFSA0A0A6YYL1 179 aa6.36□□□□□ -1.39
HERC1-201ENST00000443617 MTERF4Q7Z6M4 381 aaKnown RBP6.36□□□□□ -1.39
HERC1-201ENST00000443617 ARID3AQ99856 593 aa6.36□□□□□ -1.39
HERC1-201ENST00000443617 HSP90AB1P08238 724 aaKnown RBP6.35□□□□□ -1.39
HERC1-201ENST00000443617 PKD2Q13563 968 aa6.35□□□□□ -1.39
HERC1-201ENST00000443617 CCDC18Q5T9S5 1454 aa6.35□□□□□ -1.39
HERC1-201ENST00000443617 C8orf34Q49A92 452 aa6.35□□□□□ -1.39
HERC1-201ENST00000443617 GRPEL1Q9HAV7 217 aa6.35□□□□□ -1.39
HERC1-201ENST00000443617 NASPP49321 788 aaPredicted RBP6.34□□□□□ -1.39
HERC1-201ENST00000443617 PANK3Q9H999 370 aa6.34□□□□□ -1.39
HERC1-201ENST00000443617 PANK2Q9BZ23 570 aa6.34□□□□□ -1.39
HERC1-201ENST00000443617 MAP3K1Q13233 1512 aa6.34□□□□□ -1.4
HERC1-201ENST00000443617 TBC1D2Q9BYX2 928 aa6.33□□□□□ -1.4
HERC1-201ENST00000443617 CSPP1Q1MSJ5 1256 aa6.33□□□□□ -1.4
HERC1-201ENST00000443617 SMARCA2P51531 1590 aa6.33□□□□□ -1.4
HERC1-201ENST00000443617 MFAP1P55081 439 aaKnown RBP6.33□□□□□ -1.4
HERC1-201ENST00000443617 CCDC173Q0VFZ6 552 aa6.33□□□□□ -1.4
HERC1-201ENST00000443617 FGD6Q6ZV73 1430 aa6.33□□□□□ -1.4
HERC1-201ENST00000443617 KDM2BQ8NHM5 1336 aa6.32□□□□□ -1.4
HERC1-201ENST00000443617 OFD1O75665 1012 aa6.32□□□□□ -1.4
HERC1-201ENST00000443617 ZSCAN30Q86W11 494 aa6.32□□□□□ -1.4
HERC1-201ENST00000443617 ADAMTS8Q9UP79 889 aa6.32□□□□□ -1.4
HERC1-201ENST00000443617 C22orf23Q9BZE7 217 aa6.32□□□□□ -1.4
HERC1-201ENST00000443617 R3HCC1Q9Y3T6 440 aaKnown RBP6.32□□□□□ -1.4
HERC1-201ENST00000443617 ANKRD30BQ9BXX2 1392 aa6.32□□□□□ -1.4
HERC1-201ENST00000443617 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
HERC1-201ENST00000443617 ZNF777Q9ULD5 760 aaPredicted RBP6.32□□□□□ -1.4
HERC1-201ENST00000443617 PANK1Q8TE04 598 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms