RNA–Protein interactions for RNA: ENST00000441219.5

GABRE-203, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 1,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-203ENST00000441219 NUP153P49790 1475 aaKnown RBP15.26■□□□□ 0.03
GABRE-203ENST00000441219 STRCQ7RTU9 1775 aa15.25■□□□□ 0.03
GABRE-203ENST00000441219 UBAP1LF5GYI3 381 aa15.25■□□□□ 0.03
GABRE-203ENST00000441219 LTBP4Q8N2S1 1624 aa15.25■□□□□ 0.03
GABRE-203ENST00000441219 PRXQ9BXM0 1461 aa15.25■□□□□ 0.03
GABRE-203ENST00000441219 HECW1Q76N89 1606 aa15.24■□□□□ 0.03
GABRE-203ENST00000441219 SCAPERQ9BY12 1400 aa15.24■□□□□ 0.03
GABRE-203ENST00000441219 RAPGEF6Q8TEU7 1601 aa15.24■□□□□ 0.03
GABRE-203ENST00000441219 C9orf84Q5VXU9 1444 aa15.23■□□□□ 0.03
GABRE-203ENST00000441219 ATP10AO60312 1499 aa15.23■□□□□ 0.03
GABRE-203ENST00000441219 IQSEC2Q5JU85 1478 aa15.23■□□□□ 0.03
GABRE-203ENST00000441219 CFAP74Q9C0B2 1584 aa15.21■□□□□ 0.03
GABRE-203ENST00000441219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.21■□□□□ 0.021e-6■■■□□ 14.9
GABRE-203ENST00000441219 RANGAP1P46060 587 aaPredicted RBP15.2■□□□□ 0.02
GABRE-203ENST00000441219 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
GABRE-203ENST00000441219 ZNF335Q9H4Z2 1342 aaPredicted RBP15.17■□□□□ 0.02
GABRE-203ENST00000441219 MYT1LQ9UL68 1186 aa15.16■□□□□ 0.02
GABRE-203ENST00000441219 SAMD9Q5K651 1589 aa15.15■□□□□ 0.02
GABRE-203ENST00000441219 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
GABRE-203ENST00000441219 PLCH2O75038 1416 aa15.14■□□□□ 0.01
GABRE-203ENST00000441219 TRAPPC8Q9Y2L5 1435 aa15.13■□□□□ 0.01
GABRE-203ENST00000441219 EFCAB2Q5VUJ9 269 aa15.13■□□□□ 0.01
GABRE-203ENST00000441219 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
GABRE-203ENST00000441219 NCKAP5LQ9HCH0 1330 aa15.12■□□□□ 0.01
GABRE-203ENST00000441219 HSPA1LP34931 641 aa15.12■□□□□ 0.01
GABRE-203ENST00000441219 AFAP1Q8N556 730 aa15.12■□□□□ 0.01
GABRE-203ENST00000441219 MED1Q15648 1581 aaPredicted RBP15.09■□□□□ 0.01
GABRE-203ENST00000441219 PIP4K2BP78356 416 aa15.09■□□□□ 0.01
GABRE-203ENST00000441219 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
GABRE-203ENST00000441219 SETD1BQ9UPS6 1966 aaKnown RBP15.08■□□□□ 0
GABRE-203ENST00000441219 ZNF518AQ6AHZ1 1483 aa15.07■□□□□ 0
GABRE-203ENST00000441219 CDK13Q14004 1512 aaKnown RBP15.06■□□□□ 0
GABRE-203ENST00000441219 CAMSAP1Q5T5Y3 1602 aa15.05■□□□□ 0
GABRE-203ENST00000441219 C3P01024 1663 aa15.02■□□□□ -0
GABRE-203ENST00000441219 DIP2CQ9Y2E4 1556 aa15.02□□□□□ -0.01
GABRE-203ENST00000441219 CNTLNQ9NXG0 1405 aa15.02□□□□□ -0.01
GABRE-203ENST00000441219 PKD2Q13563 968 aa15.01□□□□□ -0.01
GABRE-203ENST00000441219 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
GABRE-203ENST00000441219 ATP1B4Q9UN42 357 aaPredicted RBP15.01□□□□□ -0.01
GABRE-203ENST00000441219 KDM5CP41229 1560 aa15□□□□□ -0.01
GABRE-203ENST00000441219 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
GABRE-203ENST00000441219 TOM1O60784 492 aa14.99□□□□□ -0.01
GABRE-203ENST00000441219 NPATQ14207 1427 aa14.98□□□□□ -0.01
GABRE-203ENST00000441219 AGLP35573 1532 aa14.98□□□□□ -0.01
GABRE-203ENST00000441219 ARHGAP5Q13017 1502 aa14.98□□□□□ -0.01
GABRE-203ENST00000441219 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
GABRE-203ENST00000441219 MLH3Q9UHC1 1453 aa14.96□□□□□ -0.01
GABRE-203ENST00000441219 ZMYM3Q14202 1370 aa14.96□□□□□ -0.01
GABRE-203ENST00000441219 ABCA6Q8N139 1617 aa14.96□□□□□ -0.02
GABRE-203ENST00000441219 SENP3Q9H4L4 574 aaPredicted RBP14.95□□□□□ -0.02
GABRE-203ENST00000441219 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
GABRE-203ENST00000441219 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
GABRE-203ENST00000441219 CDK11AQ9UQ88 783 aaPredicted RBP14.94□□□□□ -0.02
GABRE-203ENST00000441219 MYO5CQ9NQX4 1742 aa14.91□□□□□ -0.02
GABRE-203ENST00000441219 KIF14Q15058 1648 aa14.9□□□□□ -0.02
GABRE-203ENST00000441219 TROQ12816 1431 aaPredicted RBP14.89□□□□□ -0.03
GABRE-203ENST00000441219 CEP170BQ9Y4F5 1589 aaPredicted RBP14.87□□□□□ -0.03
GABRE-203ENST00000441219 CLIP1P30622 1438 aa14.87□□□□□ -0.03
GABRE-203ENST00000441219 PTPRKQ15262 1439 aa14.87□□□□□ -0.03
GABRE-203ENST00000441219 CPS1P31327 1500 aa14.86□□□□□ -0.03
GABRE-203ENST00000441219 RGS17Q9UGC6 210 aaPredicted RBP14.86□□□□□ -0.03
GABRE-203ENST00000441219 SHANK2Q9UPX8 1470 aa14.86□□□□□ -0.03
GABRE-203ENST00000441219 MYO3AQ8NEV4 1616 aa14.84□□□□□ -0.03
GABRE-203ENST00000441219 ABCC1P33527 1531 aa14.84□□□□□ -0.03
GABRE-203ENST00000441219 GGT6Q6P531 493 aa14.84□□□□□ -0.03
GABRE-203ENST00000441219 FMN1Q68DA7 1419 aa14.83□□□□□ -0.04
GABRE-203ENST00000441219 SPAG9O60271 1321 aaKnown RBP14.82□□□□□ -0.04
GABRE-203ENST00000441219 MROH2AA6NES4 1674 aa14.82□□□□□ -0.04
GABRE-203ENST00000441219 ZNF142P52746 1687 aaPredicted RBP14.82□□□□□ -0.04
GABRE-203ENST00000441219 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
GABRE-203ENST00000441219 A2ML1A8K2U0 1454 aa14.81□□□□□ -0.04
GABRE-203ENST00000441219 KIDINS220Q9ULH0 1771 aa14.8□□□□□ -0.04
GABRE-203ENST00000441219 ALKQ9UM73 1620 aa14.79□□□□□ -0.04
GABRE-203ENST00000441219 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
GABRE-203ENST00000441219 SAMD9LQ8IVG5 1584 aa14.77□□□□□ -0.05
GABRE-203ENST00000441219 HNRNPMP52272 730 aaKnown RBP eCLIP14.76□□□□□ -0.052e-9■■■■■ 28.2
GABRE-203ENST00000441219 POTEAQ6S8J7 498 aa14.76□□□□□ -0.05
GABRE-203ENST00000441219 ANKLE2Q86XL3 938 aa14.76□□□□□ -0.05
GABRE-203ENST00000441219 CLTCQ00610 1675 aaKnown RBP14.76□□□□□ -0.05
GABRE-203ENST00000441219 ITSN2Q9NZM3 1697 aa14.76□□□□□ -0.05
GABRE-203ENST00000441219 EEA1Q15075 1411 aa14.76□□□□□ -0.05
GABRE-203ENST00000441219 NEURL4Q96JN8 1562 aa14.75□□□□□ -0.05
GABRE-203ENST00000441219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.057e-11■■■■■ 45.6
GABRE-203ENST00000441219 A2MP01023 1474 aa14.75□□□□□ -0.05
GABRE-203ENST00000441219 DNMT1P26358 1616 aaKnown RBP14.75□□□□□ -0.05
GABRE-203ENST00000441219 CDC42BPBQ9Y5S2 1711 aa14.74□□□□□ -0.05
GABRE-203ENST00000441219 FBXO31Q5XUX0 539 aaPredicted RBP14.74□□□□□ -0.05
GABRE-203ENST00000441219 TNRQ92752 1358 aa14.74□□□□□ -0.05
GABRE-203ENST00000441219 VWDEQ8N2E2 1590 aa14.74□□□□□ -0.05
GABRE-203ENST00000441219 PREX2Q70Z35 1606 aa14.74□□□□□ -0.05
GABRE-203ENST00000441219 NPHP4O75161 1426 aaPredicted RBP14.72□□□□□ -0.05
GABRE-203ENST00000441219 UBTFP17480 764 aaKnown RBP14.72□□□□□ -0.05
GABRE-203ENST00000441219 SUPT6HQ7KZ85 1726 aaKnown RBP14.72□□□□□ -0.05
GABRE-203ENST00000441219 ARHGAP35Q9NRY4 1499 aa14.72□□□□□ -0.05
GABRE-203ENST00000441219 SYCP2Q9BX26 1530 aa14.71□□□□□ -0.05
GABRE-203ENST00000441219 PLXNC1O60486 1568 aa14.7□□□□□ -0.06
GABRE-203ENST00000441219 ATP7AQ04656 1500 aa14.7□□□□□ -0.06
GABRE-203ENST00000441219 THEMISQ8N1K5 641 aaPredicted RBP14.69□□□□□ -0.06
GABRE-203ENST00000441219 LRRC7Q96NW7 1537 aa14.69□□□□□ -0.06
GABRE-203ENST00000441219 MED14O60244 1454 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms