RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 JPH4Q96JJ6 628 aa26.86■■□□□ 1.89
LRCH3-207ENST00000441090 PRG4Q92954 1404 aaPredicted RBP26.85■■□□□ 1.89
LRCH3-207ENST00000441090 KIF14Q15058 1648 aa26.82■■□□□ 1.88
LRCH3-207ENST00000441090 TRIM52Q96A61 297 aa26.81■■□□□ 1.88
LRCH3-207ENST00000441090 ABCA8O94911 1581 aa26.8■■□□□ 1.88
LRCH3-207ENST00000441090 DDX10Q13206 875 aaKnown RBP26.79■■□□□ 1.88
LRCH3-207ENST00000441090 ZNF644Q9H582 1327 aaPredicted RBP26.79■■□□□ 1.88
LRCH3-207ENST00000441090 CAMSAP2Q08AD1 1489 aa26.78■■□□□ 1.88
LRCH3-207ENST00000441090 ADGBQ8N7X0 1667 aa26.78■■□□□ 1.88
LRCH3-207ENST00000441090 GPATCH8Q9UKJ3 1502 aaKnown RBP26.77■■□□□ 1.88
LRCH3-207ENST00000441090 MPHOSPH9Q99550 1183 aa26.77■■□□□ 1.88
LRCH3-207ENST00000441090 CROCC2H7BZ55 1655 aa26.75■■□□□ 1.87
LRCH3-207ENST00000441090 HIRIP3Q9BW71 556 aaPredicted RBP26.73■■□□□ 1.87
LRCH3-207ENST00000441090 CFDP1Q9UEE9 299 aaPredicted RBP26.71■■□□□ 1.87
LRCH3-207ENST00000441090 CDC42BPAQ5VT25 1732 aa26.7■■□□□ 1.86
LRCH3-207ENST00000441090 PELP1Q8IZL8 1130 aaKnown RBP26.68■■□□□ 1.86
LRCH3-207ENST00000441090 ADGRL2O95490 1459 aa26.67■■□□□ 1.86
LRCH3-207ENST00000441090 ATP10BO94823 1461 aa26.66■■□□□ 1.86
LRCH3-207ENST00000441090 NCOA1Q15788 1441 aa26.64■■□□□ 1.86
LRCH3-207ENST00000441090 CHD1O14646 1710 aa26.64■■□□□ 1.85
LRCH3-207ENST00000441090 ABCC10Q5T3U5 1492 aa26.64■■□□□ 1.85
LRCH3-207ENST00000441090 ANKRD30BQ9BXX2 1392 aa26.63■■□□□ 1.85
LRCH3-207ENST00000441090 KCNH8Q96L42 1107 aa26.63■■□□□ 1.85
LRCH3-207ENST00000441090 RPRD2Q5VT52 1461 aaKnown RBP26.62■■□□□ 1.85
LRCH3-207ENST00000441090 PLEKHD1A6NEE1 506 aa26.61■■□□□ 1.85
LRCH3-207ENST00000441090 FOXD1Q16676 465 aa26.59■■□□□ 1.85
LRCH3-207ENST00000441090 PZPP20742 1482 aa26.57■■□□□ 1.84
LRCH3-207ENST00000441090 ZNF777Q9ULD5 760 aaPredicted RBP26.56■■□□□ 1.84
LRCH3-207ENST00000441090 L3MBTL2Q969R5 705 aa26.55■■□□□ 1.84
LRCH3-207ENST00000441090 TEX14Q8IWB6 1497 aa26.55■■□□□ 1.84
LRCH3-207ENST00000441090 CCER2I3L3R5 266 aa26.55■■□□□ 1.84
LRCH3-207ENST00000441090 ANP32CO43423 234 aa26.55■■□□□ 1.84
LRCH3-207ENST00000441090 SLC4A1APQ9BWU0 796 aaKnown RBP26.55■■□□□ 1.84
LRCH3-207ENST00000441090 SHANK2Q9UPX8 1470 aa26.54■■□□□ 1.84
LRCH3-207ENST00000441090 PTPRGP23470 1445 aa26.54■■□□□ 1.84
LRCH3-207ENST00000441090 ANKRD30AQ9BXX3 1397 aa26.54■■□□□ 1.84
LRCH3-207ENST00000441090 SHROOM2Q13796 1616 aa26.53■■□□□ 1.84
LRCH3-207ENST00000441090 HSPA5P11021 654 aaKnown RBP26.49■■□□□ 1.83
LRCH3-207ENST00000441090 ARHGEF5Q12774 1597 aa26.46■■□□□ 1.83
LRCH3-207ENST00000441090 EIF4G2P78344 907 aaKnown RBP eCLIP26.46■■□□□ 1.83
LRCH3-207ENST00000441090 C9orf84Q5VXU9 1444 aa26.46■■□□□ 1.83
LRCH3-207ENST00000441090 ANKRD50Q9ULJ7 1429 aa26.46■■□□□ 1.83
LRCH3-207ENST00000441090 CDC42BPBQ9Y5S2 1711 aa26.45■■□□□ 1.82
LRCH3-207ENST00000441090 PREX2Q70Z35 1606 aa26.44■■□□□ 1.82
LRCH3-207ENST00000441090 KIAA1107Q9UPP5 1409 aa26.44■■□□□ 1.82
LRCH3-207ENST00000441090 WASHC2AQ641Q2 1341 aa26.42■■□□□ 1.82
LRCH3-207ENST00000441090 POLR1AO95602 1720 aaPredicted RBP26.39■■□□□ 1.82
LRCH3-207ENST00000441090 SAMD9LQ8IVG5 1584 aa26.39■■□□□ 1.81
LRCH3-207ENST00000441090 KDM5DQ9BY66 1539 aa26.38■■□□□ 1.81
LRCH3-207ENST00000441090 NBPF8Q3BBV2 869 aa26.38■■□□□ 1.81
LRCH3-207ENST00000441090 MBD5Q9P267 1494 aa26.37■■□□□ 1.81
LRCH3-207ENST00000441090 TSPY4P0CV99 314 aa26.34■■□□□ 1.81
LRCH3-207ENST00000441090 TSPY10P0CW01 314 aa26.34■■□□□ 1.81
LRCH3-207ENST00000441090 SUPT16HQ9Y5B9 1047 aaKnown RBP26.34■■□□□ 1.81
LRCH3-207ENST00000441090 CCDC141Q6ZP82 1450 aa26.33■■□□□ 1.81
LRCH3-207ENST00000441090 ABCC2Q92887 1545 aa26.33■■□□□ 1.8
LRCH3-207ENST00000441090 PKD2Q13563 968 aa26.32■■□□□ 1.8
LRCH3-207ENST00000441090 ERCC6L2Q5T890 1561 aa26.32■■□□□ 1.8
LRCH3-207ENST00000441090 SPATA31E1Q6ZUB1 1445 aa26.31■■□□□ 1.8
LRCH3-207ENST00000441090 CNTLNQ9NXG0 1405 aa26.31■■□□□ 1.8
LRCH3-207ENST00000441090 TTC37Q6PGP7 1564 aa26.31■■□□□ 1.8
LRCH3-207ENST00000441090 KIF15Q9NS87 1388 aa26.3■■□□□ 1.8
LRCH3-207ENST00000441090 HNRNPMP52272 730 aaKnown RBP eCLIP26.3■■□□□ 1.8
LRCH3-207ENST00000441090 NUP155O75694 1391 aa26.28■■□□□ 1.8
LRCH3-207ENST00000441090 CCDC7Q96M83 1385 aa26.28■■□□□ 1.8
LRCH3-207ENST00000441090 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.28■■□□□ 1.81e-6■■■■□ 23.9
LRCH3-207ENST00000441090 MYO5CQ9NQX4 1742 aa26.27■■□□□ 1.8
LRCH3-207ENST00000441090 RSPH4AQ5TD94 716 aa26.26■■□□□ 1.79
LRCH3-207ENST00000441090 MAST1Q9Y2H9 1570 aa26.25■■□□□ 1.79
LRCH3-207ENST00000441090 C11orf95C9JLR9 678 aaPredicted RBP26.24■■□□□ 1.79
LRCH3-207ENST00000441090 CLASP1Q7Z460 1538 aa26.24■■□□□ 1.79
LRCH3-207ENST00000441090 ARHGAP5Q13017 1502 aa26.23■■□□□ 1.79
LRCH3-207ENST00000441090 SYCP2Q9BX26 1530 aa26.23■■□□□ 1.79
LRCH3-207ENST00000441090 ARHGEF12Q9NZN5 1544 aa26.2■■□□□ 1.78
LRCH3-207ENST00000441090 UHRF1BP1Q6BDS2 1440 aa26.18■■□□□ 1.78
LRCH3-207ENST00000441090 ZCCHC11Q5TAX3 1644 aaKnown RBP26.17■■□□□ 1.78
LRCH3-207ENST00000441090 FAM135AQ9P2D6 1515 aa26.16■■□□□ 1.78
LRCH3-207ENST00000441090 PLEKHH2Q8IVE3 1493 aa26.16■■□□□ 1.78
LRCH3-207ENST00000441090 PLXNC1O60486 1568 aa26.16■■□□□ 1.78
LRCH3-207ENST00000441090 KDM5CP41229 1560 aa26.16■■□□□ 1.78
LRCH3-207ENST00000441090 KIF7Q2M1P5 1343 aa26.16■■□□□ 1.78
LRCH3-207ENST00000441090 UNC13BO14795 1591 aa26.15■■□□□ 1.78
LRCH3-207ENST00000441090 UHRF1BP1LA0JNW5 1464 aa26.15■■□□□ 1.78
LRCH3-207ENST00000441090 RALGAPBQ86X10 1494 aa26.13■■□□□ 1.77
LRCH3-207ENST00000441090 BCORL1Q5H9F3 1711 aa26.12■■□□□ 1.77
LRCH3-207ENST00000441090 USP47Q96K76 1375 aa26.11■■□□□ 1.77
LRCH3-207ENST00000441090 PRKRIP1Q9H875 184 aaPredicted RBP26.08■■□□□ 1.77
LRCH3-207ENST00000441090 ZNF326Q5BKZ1 582 aaKnown RBP26.07■■□□□ 1.76
LRCH3-207ENST00000441090 PLCH2O75038 1416 aa26.06■■□□□ 1.76
LRCH3-207ENST00000441090 IQGAP3Q86VI3 1631 aa26.05■■□□□ 1.76
LRCH3-207ENST00000441090 DUOX2Q9NRD8 1548 aa26.03■■□□□ 1.76
LRCH3-207ENST00000441090 ARID4BQ4LE39 1312 aaPredicted RBP26.02■■□□□ 1.76
LRCH3-207ENST00000441090 ABCC1P33527 1531 aa26.01■■□□□ 1.75
LRCH3-207ENST00000441090 HNRNPUQ00839 825 aaKnown RBP eCLIP26■■□□□ 1.75
LRCH3-207ENST00000441090 FKBP8Q14318 412 aa25.99■■□□□ 1.75
LRCH3-207ENST00000441090 MAGI2Q86UL8 1455 aa25.99■■□□□ 1.75
LRCH3-207ENST00000441090 CCDC184Q52MB2 194 aa25.97■■□□□ 1.75
LRCH3-207ENST00000441090 CCDC144AA2RUR9 1427 aa25.97■■□□□ 1.75
LRCH3-207ENST00000441090 ERBINQ96RT1 1412 aa25.97■■□□□ 1.75
LRCH3-207ENST00000441090 EFCAB2Q5VUJ9 269 aa25.95■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms