RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
SMC2-204ENST00000440179 MAGI2Q86UL8 1455 aa23.2■■□□□ 1.3
SMC2-204ENST00000440179 FER1L4A9Z1Z3 1794 aa23.19■■□□□ 1.3
SMC2-204ENST00000440179 HECW1Q76N89 1606 aa23.19■■□□□ 1.3
SMC2-204ENST00000440179 MLECQ14165 292 aa23.17■■□□□ 1.3
SMC2-204ENST00000440179 CSRNP3Q8WYN3 585 aa23.17■■□□□ 1.3
SMC2-204ENST00000440179 ARHGEF12Q9NZN5 1544 aa23.14■■□□□ 1.3
SMC2-204ENST00000440179 ILDR2Q71H61 639 aa23.14■■□□□ 1.29
SMC2-204ENST00000440179 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
SMC2-204ENST00000440179 SCAPERQ9BY12 1400 aa23.11■■□□□ 1.29
SMC2-204ENST00000440179 PREX1Q8TCU6 1659 aa23.09■■□□□ 1.29
SMC2-204ENST00000440179 DISP3Q9P2K9 1392 aa23.09■■□□□ 1.29
SMC2-204ENST00000440179 ATP10AO60312 1499 aa23.08■■□□□ 1.29
SMC2-204ENST00000440179 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.28
SMC2-204ENST00000440179 PLCH2O75038 1416 aa23.08■■□□□ 1.28
SMC2-204ENST00000440179 STRCQ7RTU9 1775 aa23.06■■□□□ 1.28
SMC2-204ENST00000440179 C9orf84Q5VXU9 1444 aa23.06■■□□□ 1.28
SMC2-204ENST00000440179 SOCS7O14512 581 aa23.05■■□□□ 1.28
SMC2-204ENST00000440179 CEBPAP49715 358 aaPredicted RBP23.05■■□□□ 1.28
SMC2-204ENST00000440179 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
SMC2-204ENST00000440179 UHRF1BP1Q6BDS2 1440 aa22.98■■□□□ 1.27
SMC2-204ENST00000440179 EFCAB2Q5VUJ9 269 aa22.96■■□□□ 1.27
SMC2-204ENST00000440179 EEA1Q15075 1411 aa22.96■■□□□ 1.27
SMC2-204ENST00000440179 SETD1BQ9UPS6 1966 aaKnown RBP22.94■■□□□ 1.26
SMC2-204ENST00000440179 MYO5CQ9NQX4 1742 aa22.94■■□□□ 1.26
SMC2-204ENST00000440179 KDM5CP41229 1560 aa22.94■■□□□ 1.26
SMC2-204ENST00000440179 SPATA31D1Q6ZQQ2 1576 aa22.93■■□□□ 1.26
SMC2-204ENST00000440179 ZNF518AQ6AHZ1 1483 aa22.93■■□□□ 1.26
SMC2-204ENST00000440179 PTPRTO14522 1441 aa22.91■■□□□ 1.26
SMC2-204ENST00000440179 KIF14Q15058 1648 aa22.91■■□□□ 1.26
SMC2-204ENST00000440179 DIP2CQ9Y2E4 1556 aa22.9■■□□□ 1.26
SMC2-204ENST00000440179 AFAP1Q8N556 730 aa22.9■■□□□ 1.26
SMC2-204ENST00000440179 LTBP4Q8N2S1 1624 aa22.89■■□□□ 1.25
SMC2-204ENST00000440179 REREQ9P2R6 1566 aa22.89■■□□□ 1.25
SMC2-204ENST00000440179 C3P01024 1663 aa22.87■■□□□ 1.25
SMC2-204ENST00000440179 ARHGAP5Q13017 1502 aa22.85■■□□□ 1.25
SMC2-204ENST00000440179 ABCA6Q8N139 1617 aa22.85■■□□□ 1.25
SMC2-204ENST00000440179 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
SMC2-204ENST00000440179 MLH3Q9UHC1 1453 aa22.82■■□□□ 1.24
SMC2-204ENST00000440179 FMN1Q68DA7 1419 aa22.82■■□□□ 1.24
SMC2-204ENST00000440179 ATP1B4Q9UN42 357 aaPredicted RBP22.81■■□□□ 1.24
SMC2-204ENST00000440179 AGLP35573 1532 aa22.81■■□□□ 1.24
SMC2-204ENST00000440179 NCOA1Q15788 1441 aa22.81■■□□□ 1.24
SMC2-204ENST00000440179 TRAPPC8Q9Y2L5 1435 aa22.81■■□□□ 1.24
SMC2-204ENST00000440179 IQSEC2Q5JU85 1478 aa22.8■■□□□ 1.24
SMC2-204ENST00000440179 CDK11AQ9UQ88 783 aaPredicted RBP22.79■■□□□ 1.24
SMC2-204ENST00000440179 ARHGAP35Q9NRY4 1499 aa22.78■■□□□ 1.24
SMC2-204ENST00000440179 MYT1LQ9UL68 1186 aa22.77■■□□□ 1.24
SMC2-204ENST00000440179 CDC42BPBQ9Y5S2 1711 aa22.76■■□□□ 1.23
SMC2-204ENST00000440179 ABCC1P33527 1531 aa22.74■■□□□ 1.23
SMC2-204ENST00000440179 POTEDQ86YR6 584 aa22.74■■□□□ 1.23
SMC2-204ENST00000440179 LRRIQ1Q96JM4 1722 aa22.74■■□□□ 1.23
SMC2-204ENST00000440179 CLIP1P30622 1438 aa22.74■■□□□ 1.23
SMC2-204ENST00000440179 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
SMC2-204ENST00000440179 ESF1Q9H501 851 aaKnown RBP22.71■■□□□ 1.23
SMC2-204ENST00000440179 PREX2Q70Z35 1606 aa22.71■■□□□ 1.23
SMC2-204ENST00000440179 KIDINS220Q9ULH0 1771 aa22.71■■□□□ 1.23
SMC2-204ENST00000440179 CAMSAP1Q5T5Y3 1602 aa22.7■■□□□ 1.22
SMC2-204ENST00000440179 ITSN2Q9NZM3 1697 aa22.7■■□□□ 1.22
SMC2-204ENST00000440179 NPATQ14207 1427 aa22.68■■□□□ 1.22
SMC2-204ENST00000440179 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
SMC2-204ENST00000440179 ZNF335Q9H4Z2 1342 aaPredicted RBP22.65■■□□□ 1.22
SMC2-204ENST00000440179 UBTFP17480 764 aaKnown RBP22.65■■□□□ 1.22
SMC2-204ENST00000440179 MROH2AA6NES4 1674 aa22.65■■□□□ 1.22
SMC2-204ENST00000440179 NCKAP5LQ9HCH0 1330 aa22.63■■□□□ 1.21
SMC2-204ENST00000440179 ZMYM3Q14202 1370 aa22.62■■□□□ 1.21
SMC2-204ENST00000440179 SAMD9LQ8IVG5 1584 aa22.6■■□□□ 1.21
SMC2-204ENST00000440179 UBAP1LF5GYI3 381 aa22.6■■□□□ 1.21
SMC2-204ENST00000440179 CDC42BPAQ5VT25 1732 aa22.59■■□□□ 1.21
SMC2-204ENST00000440179 ZNF142P52746 1687 aaPredicted RBP22.58■■□□□ 1.2
SMC2-204ENST00000440179 PLA2R1Q13018 1463 aa22.57■■□□□ 1.2
SMC2-204ENST00000440179 TCOF1Q13428 1488 aaKnown RBP22.57■■□□□ 1.2
SMC2-204ENST00000440179 MYO3AQ8NEV4 1616 aa22.57■■□□□ 1.2
SMC2-204ENST00000440179 CCDC18Q5T9S5 1454 aa22.55■■□□□ 1.2
SMC2-204ENST00000440179 SYCP2Q9BX26 1530 aa22.54■■□□□ 1.2
SMC2-204ENST00000440179 CASKIN1Q8WXD9 1431 aa22.54■■□□□ 1.2
SMC2-204ENST00000440179 PKD2Q13563 968 aa22.53■■□□□ 1.2
SMC2-204ENST00000440179 PTPRKQ15262 1439 aa22.53■■□□□ 1.2
SMC2-204ENST00000440179 PLXNC1O60486 1568 aa22.53■■□□□ 1.2
SMC2-204ENST00000440179 CEP170BQ9Y4F5 1589 aaPredicted RBP22.53■■□□□ 1.2
SMC2-204ENST00000440179 SUPT6HQ7KZ85 1726 aaKnown RBP22.53■■□□□ 1.2
SMC2-204ENST00000440179 CLTCQ00610 1675 aaKnown RBP22.52■■□□□ 1.2
SMC2-204ENST00000440179 SPAG9O60271 1321 aaKnown RBP22.51■■□□□ 1.19
SMC2-204ENST00000440179 ATP7AQ04656 1500 aa22.49■■□□□ 1.19
SMC2-204ENST00000440179 ZNF777Q9ULD5 760 aaPredicted RBP22.49■■□□□ 1.19
SMC2-204ENST00000440179 GPATCH8Q9UKJ3 1502 aaKnown RBP22.48■■□□□ 1.19
SMC2-204ENST00000440179 INO80Q9ULG1 1556 aaPredicted RBP22.47■■□□□ 1.19
SMC2-204ENST00000440179 HNRNPMP52272 730 aaKnown RBP eCLIP22.47■■□□□ 1.19
SMC2-204ENST00000440179 A2MP01023 1474 aa22.47■■□□□ 1.19
SMC2-204ENST00000440179 MED1Q15648 1581 aaPredicted RBP22.45■■□□□ 1.18
SMC2-204ENST00000440179 HSPA1LP34931 641 aa22.44■■□□□ 1.18
SMC2-204ENST00000440179 KIAA1107Q9UPP5 1409 aa22.44■■□□□ 1.18
SMC2-204ENST00000440179 FYCO1Q9BQS8 1478 aa22.41■■□□□ 1.18
SMC2-204ENST00000440179 GGT6Q6P531 493 aa22.41■■□□□ 1.18
SMC2-204ENST00000440179 A2ML1A8K2U0 1454 aa22.41■■□□□ 1.18
SMC2-204ENST00000440179 DNMT1P26358 1616 aaKnown RBP22.4■■□□□ 1.18
SMC2-204ENST00000440179 PLEKHH2Q8IVE3 1493 aa22.39■■□□□ 1.17
SMC2-204ENST00000440179 NEURL4Q96JN8 1562 aa22.38■■□□□ 1.17
SMC2-204ENST00000440179 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
SMC2-204ENST00000440179 PIP4K2BP78356 416 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms