RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 CNTLNQ9NXG0 1405 aa24.37■■□□□ 1.49
KCNC4-204ENST00000438661 URB2Q14146 1524 aaKnown RBP24.36■■□□□ 1.49
KCNC4-204ENST00000438661 GRIN2BQ13224 1484 aa24.35■■□□□ 1.49
KCNC4-204ENST00000438661 BRPF3Q9ULD4 1205 aa24.35■■□□□ 1.49
KCNC4-204ENST00000438661 SAMD9Q5K651 1589 aa24.33■■□□□ 1.49
KCNC4-204ENST00000438661 NUDCQ9Y266 331 aa24.32■■□□□ 1.48
KCNC4-204ENST00000438661 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
KCNC4-204ENST00000438661 KDM5BQ9UGL1 1544 aa24.31■■□□□ 1.48
KCNC4-204ENST00000438661 SUPT6HQ7KZ85 1726 aaKnown RBP24.29■■□□□ 1.48
KCNC4-204ENST00000438661 FOXD1Q16676 465 aa24.29■■□□□ 1.48
KCNC4-204ENST00000438661 ARID3CA6NKF2 412 aa24.28■■□□□ 1.48
KCNC4-204ENST00000438661 MAGI3Q5TCQ9 1506 aa24.27■■□□□ 1.48
KCNC4-204ENST00000438661 CCDC7Q96M83 1385 aa24.27■■□□□ 1.48
KCNC4-204ENST00000438661 L3MBTL2Q969R5 705 aa24.26■■□□□ 1.47
KCNC4-204ENST00000438661 EHBP1L1Q8N3D4 1523 aa24.25■■□□□ 1.47
KCNC4-204ENST00000438661 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
KCNC4-204ENST00000438661 UGGT2Q9NYU1 1516 aa24.24■■□□□ 1.47
KCNC4-204ENST00000438661 UBE2Q2Q8WVN8 375 aa24.23■■□□□ 1.47
KCNC4-204ENST00000438661 SMG6Q86US8 1419 aaKnown RBP24.22■■□□□ 1.47
KCNC4-204ENST00000438661 PDE4AP27815 886 aa24.22■■□□□ 1.47
KCNC4-204ENST00000438661 DENND4BO75064 1496 aaPredicted RBP24.22■■□□□ 1.47
KCNC4-204ENST00000438661 MPHOSPH9Q99550 1183 aa24.19■■□□□ 1.46
KCNC4-204ENST00000438661 USP35Q9P2H5 1018 aa24.19■■□□□ 1.46
KCNC4-204ENST00000438661 EXOC6Q8TAG9 804 aa24.19■■□□□ 1.46
KCNC4-204ENST00000438661 DNAJC5BQ9UF47 199 aa24.18■■□□□ 1.46
KCNC4-204ENST00000438661 KDM6BO15054 1643 aa24.18■■□□□ 1.46
KCNC4-204ENST00000438661 THOC2Q8NI27 1593 aaKnown RBP24.18■■□□□ 1.46
KCNC4-204ENST00000438661 KIF7Q2M1P5 1343 aa24.18■■□□□ 1.46
KCNC4-204ENST00000438661 ARHGEF11O15085 1522 aa24.17■■□□□ 1.46
KCNC4-204ENST00000438661 PPM1GO15355 546 aaPredicted RBP24.16■■□□□ 1.46
KCNC4-204ENST00000438661 SLC4A3P48751 1232 aa24.15■■□□□ 1.46
KCNC4-204ENST00000438661 SKAP1Q86WV1 359 aa24.15■■□□□ 1.46
KCNC4-204ENST00000438661 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
KCNC4-204ENST00000438661 WASHC2CQ9Y4E1 1318 aa24.14■■□□□ 1.45
KCNC4-204ENST00000438661 GSE1Q14687 1217 aa24.13■■□□□ 1.45
KCNC4-204ENST00000438661 NBPF8Q3BBV2 869 aa24.13■■□□□ 1.45
KCNC4-204ENST00000438661 RNF123Q5XPI4 1314 aa24.13■■□□□ 1.45
KCNC4-204ENST00000438661 TCOF1Q13428 1488 aaKnown RBP24.12■■□□□ 1.45
KCNC4-204ENST00000438661 NCOA1Q15788 1441 aa24.12■■□□□ 1.45
KCNC4-204ENST00000438661 TCERG1O14776 1098 aaKnown RBP24.11■■□□□ 1.45
KCNC4-204ENST00000438661 CDK13Q14004 1512 aaKnown RBP24.1■■□□□ 1.45
KCNC4-204ENST00000438661 BACH2Q9BYV9 841 aa24.1■■□□□ 1.45
KCNC4-204ENST00000438661 TMC1Q8TDI8 760 aa24.09■■□□□ 1.45
KCNC4-204ENST00000438661 EPRSP07814 1512 aaKnown RBP24.09■■□□□ 1.45
KCNC4-204ENST00000438661 PDS5BQ9NTI5 1447 aa24.09■■□□□ 1.45
KCNC4-204ENST00000438661 ZNF326Q5BKZ1 582 aaKnown RBP24.09■■□□□ 1.45
KCNC4-204ENST00000438661 GCC2Q8IWJ2 1684 aa24.08■■□□□ 1.45
KCNC4-204ENST00000438661 HECW1Q76N89 1606 aa24.08■■□□□ 1.45
KCNC4-204ENST00000438661 FRAT1Q92837 279 aaPredicted RBP24.07■■□□□ 1.44
KCNC4-204ENST00000438661 NFKBIBQ15653 356 aa24.05■■□□□ 1.44
KCNC4-204ENST00000438661 DAXXQ9UER7 740 aaPredicted RBP24.03■■□□□ 1.44
KCNC4-204ENST00000438661 RRP1P56182 461 aaKnown RBP24.03■■□□□ 1.44
KCNC4-204ENST00000438661 ZNF644Q9H582 1327 aaPredicted RBP24.01■■□□□ 1.43
KCNC4-204ENST00000438661 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
KCNC4-204ENST00000438661 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
KCNC4-204ENST00000438661 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
KCNC4-204ENST00000438661 IQGAP2Q13576 1575 aa23.98■■□□□ 1.43
KCNC4-204ENST00000438661 PNISRQ8TF01 805 aaKnown RBP23.98■■□□□ 1.43
KCNC4-204ENST00000438661 ANKRD30BQ9BXX2 1392 aa23.98■■□□□ 1.43
KCNC4-204ENST00000438661 PLIN1O60240 522 aa23.97■■□□□ 1.43
KCNC4-204ENST00000438661 RCAN3Q9UKA8 241 aa23.97■■□□□ 1.43
KCNC4-204ENST00000438661 SLC4A1APQ9BWU0 796 aaKnown RBP23.97■■□□□ 1.43
KCNC4-204ENST00000438661 DAPK1P53355 1430 aa23.94■■□□□ 1.42
KCNC4-204ENST00000438661 WDR62O43379 1518 aa23.93■■□□□ 1.42
KCNC4-204ENST00000438661 DDRGK1Q96HY6 314 aa23.93■■□□□ 1.42
KCNC4-204ENST00000438661 RPRD2Q5VT52 1461 aaKnown RBP23.92■■□□□ 1.42
KCNC4-204ENST00000438661 MS4A1P11836 297 aa23.91■■□□□ 1.42
KCNC4-204ENST00000438661 ABCC5O15440 1437 aa23.91■■□□□ 1.42
KCNC4-204ENST00000438661 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
KCNC4-204ENST00000438661 DHX29Q7Z478 1369 aaKnown RBP23.9■■□□□ 1.42
KCNC4-204ENST00000438661 TEX14Q8IWB6 1497 aa23.88■■□□□ 1.41
KCNC4-204ENST00000438661 ROCK1Q13464 1354 aa23.87■■□□□ 1.41
KCNC4-204ENST00000438661 FRAT2O75474 233 aaPredicted RBP23.87■■□□□ 1.41
KCNC4-204ENST00000438661 SPATA31E1Q6ZUB1 1445 aa23.86■■□□□ 1.41
KCNC4-204ENST00000438661 ADAMTS12P58397 1594 aa23.85■■□□□ 1.41
KCNC4-204ENST00000438661 CDCA7LQ96GN5 454 aa23.85■■□□□ 1.41
KCNC4-204ENST00000438661 DCAF11Q8TEB1 546 aa23.82■■□□□ 1.4
KCNC4-204ENST00000438661 DNMT1P26358 1616 aaKnown RBP23.8■■□□□ 1.4
KCNC4-204ENST00000438661 CRBNQ96SW2 442 aa23.8■■□□□ 1.4
KCNC4-204ENST00000438661 ZNF777Q9ULD5 760 aaPredicted RBP23.8■■□□□ 1.4
KCNC4-204ENST00000438661 RSPH6AQ9H0K4 717 aa23.79■■□□□ 1.4
KCNC4-204ENST00000438661 NUP153P49790 1475 aaKnown RBP23.78■■□□□ 1.4
KCNC4-204ENST00000438661 ARXQ96QS3 562 aa23.77■■□□□ 1.4
KCNC4-204ENST00000438661 CFDP1Q9UEE9 299 aaPredicted RBP23.76■■□□□ 1.39
KCNC4-204ENST00000438661 USP47Q96K76 1375 aa23.76■■□□□ 1.39
KCNC4-204ENST00000438661 ZNF608Q9ULD9 1512 aaPredicted RBP23.76■■□□□ 1.39
KCNC4-204ENST00000438661 DISP1Q96F81 1524 aa23.76■■□□□ 1.39
KCNC4-204ENST00000438661 PRG4Q92954 1404 aaPredicted RBP23.75■■□□□ 1.39
KCNC4-204ENST00000438661 PZPP20742 1482 aa23.74■■□□□ 1.39
KCNC4-204ENST00000438661 PKD2Q13563 968 aa23.72■■□□□ 1.39
KCNC4-204ENST00000438661 FAM43AQ8N2R8 423 aa23.72■■□□□ 1.39
KCNC4-204ENST00000438661 KIAA0556O60303 1618 aa23.71■■□□□ 1.39
KCNC4-204ENST00000438661 RGS3P49796 1198 aa23.7■■□□□ 1.39
KCNC4-204ENST00000438661 C20orf194Q5TEA3 1177 aa23.7■■□□□ 1.38
KCNC4-204ENST00000438661 KIAA0586Q9BVV6 1533 aa23.7■■□□□ 1.38
KCNC4-204ENST00000438661 PKNOX2Q96KN3 472 aa23.69■■□□□ 1.38
KCNC4-204ENST00000438661 RAPGEF6Q8TEU7 1601 aa23.68■■□□□ 1.38
KCNC4-204ENST00000438661 CAMSAP2Q08AD1 1489 aa23.68■■□□□ 1.38
KCNC4-204ENST00000438661 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
KCNC4-204ENST00000438661 MYBBP1AQ9BQG0 1328 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms