RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 MPHOSPH9Q99550 1183 aa18.12■□□□□ 0.49
HCG18-236ENST00000438412 NUP160Q12769 1436 aa18.11■□□□□ 0.49
HCG18-236ENST00000438412 CFDP1Q9UEE9 299 aaPredicted RBP18.09■□□□□ 0.49
HCG18-236ENST00000438412 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
HCG18-236ENST00000438412 TROQ12816 1431 aaPredicted RBP18.07■□□□□ 0.48
HCG18-236ENST00000438412 CDK11AQ9UQ88 783 aaPredicted RBP18.07■□□□□ 0.48
HCG18-236ENST00000438412 DNMT1P26358 1616 aaKnown RBP18.06■□□□□ 0.48
HCG18-236ENST00000438412 CAMSAP2Q08AD1 1489 aa18.05■□□□□ 0.48
HCG18-236ENST00000438412 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
HCG18-236ENST00000438412 CARMIL2Q6F5E8 1435 aa18.04■□□□□ 0.48
HCG18-236ENST00000438412 L3MBTL2Q969R5 705 aa18.02■□□□□ 0.48
HCG18-236ENST00000438412 AKNAQ7Z591 1439 aa18.02■□□□□ 0.47
HCG18-236ENST00000438412 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
HCG18-236ENST00000438412 ATP10BO94823 1461 aa18■□□□□ 0.47
HCG18-236ENST00000438412 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
HCG18-236ENST00000438412 ABCA8O94911 1581 aa17.97■□□□□ 0.47
HCG18-236ENST00000438412 ROCK1Q13464 1354 aa17.96■□□□□ 0.47
HCG18-236ENST00000438412 PLEKHD1A6NEE1 506 aa17.96■□□□□ 0.47
HCG18-236ENST00000438412 CHD1O14646 1710 aa17.96■□□□□ 0.47
HCG18-236ENST00000438412 NBPF8Q3BBV2 869 aa17.95■□□□□ 0.46
HCG18-236ENST00000438412 NCOA1Q15788 1441 aa17.95■□□□□ 0.46
HCG18-236ENST00000438412 CDC42BPAQ5VT25 1732 aa17.95■□□□□ 0.46
HCG18-236ENST00000438412 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
HCG18-236ENST00000438412 ERCC6L2Q5T890 1561 aa17.94■□□□□ 0.46
HCG18-236ENST00000438412 ITSN2Q9NZM3 1697 aa17.93■□□□□ 0.46
HCG18-236ENST00000438412 WASHC2AQ641Q2 1341 aa17.93■□□□□ 0.46
HCG18-236ENST00000438412 HNRNPMP52272 730 aaKnown RBP eCLIP17.93■□□□□ 0.462e-7■□□□□ 10.1
HCG18-236ENST00000438412 ADCY10Q96PN6 1610 aa17.93■□□□□ 0.46
HCG18-236ENST00000438412 PZPP20742 1482 aa17.92■□□□□ 0.46
HCG18-236ENST00000438412 C11orf95C9JLR9 678 aaPredicted RBP17.92■□□□□ 0.46
HCG18-236ENST00000438412 PTPRGP23470 1445 aa17.91■□□□□ 0.46
HCG18-236ENST00000438412 ANP32CO43423 234 aa17.9■□□□□ 0.46
HCG18-236ENST00000438412 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
HCG18-236ENST00000438412 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
HCG18-236ENST00000438412 CROCC2H7BZ55 1655 aa17.88■□□□□ 0.45
HCG18-236ENST00000438412 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
HCG18-236ENST00000438412 TEX14Q8IWB6 1497 aa17.87■□□□□ 0.45
HCG18-236ENST00000438412 SUPT16HQ9Y5B9 1047 aaKnown RBP17.87■□□□□ 0.45
HCG18-236ENST00000438412 PKD2Q13563 968 aa17.87■□□□□ 0.45
HCG18-236ENST00000438412 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
HCG18-236ENST00000438412 EIF4G2P78344 907 aaKnown RBP eCLIP17.84■□□□□ 0.45
HCG18-236ENST00000438412 C9orf84Q5VXU9 1444 aa17.84■□□□□ 0.45
HCG18-236ENST00000438412 ANKRD50Q9ULJ7 1429 aa17.84■□□□□ 0.45
HCG18-236ENST00000438412 ANKRD30AQ9BXX3 1397 aa17.83■□□□□ 0.44
HCG18-236ENST00000438412 CNGB1Q14028 1251 aaPredicted RBP17.82■□□□□ 0.44
HCG18-236ENST00000438412 ADGRL2O95490 1459 aa17.81■□□□□ 0.44
HCG18-236ENST00000438412 NUP155O75694 1391 aa17.8■□□□□ 0.44
HCG18-236ENST00000438412 CCDC184Q52MB2 194 aa17.8■□□□□ 0.44
HCG18-236ENST00000438412 BCANQ96GW7 911 aa17.8■□□□□ 0.44
HCG18-236ENST00000438412 CDC42BPBQ9Y5S2 1711 aa17.79■□□□□ 0.44
HCG18-236ENST00000438412 SAMD9LQ8IVG5 1584 aa17.78■□□□□ 0.44
HCG18-236ENST00000438412 TTC37Q6PGP7 1564 aa17.78■□□□□ 0.44
HCG18-236ENST00000438412 TSPY4P0CV99 314 aa17.78■□□□□ 0.44
HCG18-236ENST00000438412 TSPY10P0CW01 314 aa17.78■□□□□ 0.44
HCG18-236ENST00000438412 KIAA1107Q9UPP5 1409 aa17.77■□□□□ 0.44
HCG18-236ENST00000438412 KIF15Q9NS87 1388 aa17.77■□□□□ 0.44
HCG18-236ENST00000438412 MBD5Q9P267 1494 aa17.77■□□□□ 0.43
HCG18-236ENST00000438412 CCER2I3L3R5 266 aa17.76■□□□□ 0.43
HCG18-236ENST00000438412 POLR3GLQ9BT43 218 aa17.76■□□□□ 0.43
HCG18-236ENST00000438412 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
HCG18-236ENST00000438412 SYCP2Q9BX26 1530 aa17.73■□□□□ 0.43
HCG18-236ENST00000438412 CCDC7Q96M83 1385 aa17.73■□□□□ 0.43
HCG18-236ENST00000438412 SHROOM2Q13796 1616 aa17.73■□□□□ 0.43
HCG18-236ENST00000438412 KIF7Q2M1P5 1343 aa17.72■□□□□ 0.43
HCG18-236ENST00000438412 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.43
HCG18-236ENST00000438412 PREX2Q70Z35 1606 aa17.71■□□□□ 0.43
HCG18-236ENST00000438412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.432e-6■■□□□ 11.6
HCG18-236ENST00000438412 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
HCG18-236ENST00000438412 SPATA31E1Q6ZUB1 1445 aa17.7■□□□□ 0.42
HCG18-236ENST00000438412 SHANK2Q9UPX8 1470 aa17.7■□□□□ 0.42
HCG18-236ENST00000438412 CNTLNQ9NXG0 1405 aa17.69■□□□□ 0.42
HCG18-236ENST00000438412 FKBP8Q14318 412 aa17.69■□□□□ 0.42
HCG18-236ENST00000438412 CCDC141Q6ZP82 1450 aa17.68■□□□□ 0.42
HCG18-236ENST00000438412 HNRNPUQ00839 825 aaKnown RBP eCLIP17.68■□□□□ 0.42
HCG18-236ENST00000438412 ABCC2Q92887 1545 aa17.66■□□□□ 0.42
HCG18-236ENST00000438412 SENP3-EIF4A1A0A087X0R7 540 aa17.66■□□□□ 0.42
HCG18-236ENST00000438412 BCORL1Q5H9F3 1711 aa17.66■□□□□ 0.42
HCG18-236ENST00000438412 USP47Q96K76 1375 aa17.65■□□□□ 0.42
HCG18-236ENST00000438412 ARHGEF5Q12774 1597 aa17.65■□□□□ 0.42
HCG18-236ENST00000438412 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
HCG18-236ENST00000438412 ARHGEF12Q9NZN5 1544 aa17.65■□□□□ 0.42
HCG18-236ENST00000438412 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
HCG18-236ENST00000438412 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
HCG18-236ENST00000438412 PRKRIP1Q9H875 184 aaPredicted RBP17.63■□□□□ 0.41
HCG18-236ENST00000438412 FAM9BQ8IZU0 186 aa17.62■□□□□ 0.41
HCG18-236ENST00000438412 FAM135AQ9P2D6 1515 aa17.61■□□□□ 0.41
HCG18-236ENST00000438412 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
HCG18-236ENST00000438412 PLEKHH2Q8IVE3 1493 aa17.6■□□□□ 0.41
HCG18-236ENST00000438412 MYO5CQ9NQX4 1742 aa17.6■□□□□ 0.41
HCG18-236ENST00000438412 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
HCG18-236ENST00000438412 CLASP1Q7Z460 1538 aa17.59■□□□□ 0.41
HCG18-236ENST00000438412 CARD11Q9BXL7 1154 aa17.59■□□□□ 0.41
HCG18-236ENST00000438412 KDM5DQ9BY66 1539 aa17.58■□□□□ 0.4
HCG18-236ENST00000438412 MRS2Q9HD23 443 aa17.57■□□□□ 0.4
HCG18-236ENST00000438412 KDM5CP41229 1560 aa17.57■□□□□ 0.4
HCG18-236ENST00000438412 ST20-MTHFSA0A0A6YYL1 179 aa17.56■□□□□ 0.4
HCG18-236ENST00000438412 TRAPPC8Q9Y2L5 1435 aa17.55■□□□□ 0.4
HCG18-236ENST00000438412 AFAP1Q8N556 730 aa17.55■□□□□ 0.4
HCG18-236ENST00000438412 PLA2R1Q13018 1463 aa17.55■□□□□ 0.4
HCG18-236ENST00000438412 POLR1AO95602 1720 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms