RNA–Protein interactions for RNA: ENST00000438103.6

SBNO2-202, Transcript of strawberry notch homolog 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SBNO2, Length 4,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO2-202ENST00000438103 SOX12O15370 315 aa22.12■■□□□ 1.13
SBNO2-202ENST00000438103 CCDC136Q96JN2 1154 aa22.1■■□□□ 1.13
SBNO2-202ENST00000438103 TNNT2P45379 298 aaPredicted RBP22.1■■□□□ 1.13
SBNO2-202ENST00000438103 SIN3AQ96ST3 1273 aa22.1■■□□□ 1.13
SBNO2-202ENST00000438103 PNNQ9H307 717 aaKnown RBP22.1■■□□□ 1.13
SBNO2-202ENST00000438103 NUP155O75694 1391 aa22.09■■□□□ 1.13
SBNO2-202ENST00000438103 HNRNPMP52272 730 aaKnown RBP eCLIP22.09■■□□□ 1.13
SBNO2-202ENST00000438103 U2SURPO15042 1029 aaKnown RBP22.08■■□□□ 1.13
SBNO2-202ENST00000438103 FKBP8Q14318 412 aa22.07■■□□□ 1.12
SBNO2-202ENST00000438103 NEUROD2Q15784 382 aa22.07■■□□□ 1.12
SBNO2-202ENST00000438103 RAB3GAP2Q9H2M9 1393 aa22.06■■□□□ 1.12
SBNO2-202ENST00000438103 HDGFL2Q7Z4V5 671 aaPredicted RBP22.06■■□□□ 1.12
SBNO2-202ENST00000438103 PAK3O75914 559 aaPredicted RBP22.05■■□□□ 1.12
SBNO2-202ENST00000438103 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
SBNO2-202ENST00000438103 FAM69CQ0P6D2 419 aa22.03■■□□□ 1.12
SBNO2-202ENST00000438103 TIMELESSQ9UNS1 1208 aa22.03■■□□□ 1.12
SBNO2-202ENST00000438103 CCDC18Q5T9S5 1454 aa22.02■■□□□ 1.11
SBNO2-202ENST00000438103 CSB-PGBD3P0DP91 1061 aa22.01■■□□□ 1.11
SBNO2-202ENST00000438103 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
SBNO2-202ENST00000438103 SETD5Q9C0A6 1442 aa21.98■■□□□ 1.11
SBNO2-202ENST00000438103 RAD54L2Q9Y4B4 1467 aa21.97■■□□□ 1.11
SBNO2-202ENST00000438103 MORC1Q86VD1 984 aa21.96■■□□□ 1.11
SBNO2-202ENST00000438103 CCDC9Q9Y3X0 531 aaKnown RBP21.96■■□□□ 1.11
SBNO2-202ENST00000438103 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
SBNO2-202ENST00000438103 LRRC9Q6ZRR7 1453 aa21.95■■□□□ 1.1
SBNO2-202ENST00000438103 PHLDB1Q86UU1 1377 aa21.95■■□□□ 1.1
SBNO2-202ENST00000438103 TIAM1Q13009 1591 aa21.95■■□□□ 1.1
SBNO2-202ENST00000438103 CC2D1BQ5T0F9 858 aaKnown RBP21.94■■□□□ 1.1
SBNO2-202ENST00000438103 FTSJ3Q8IY81 847 aaKnown RBP21.94■■□□□ 1.1
SBNO2-202ENST00000438103 GAPVD1Q14C86 1478 aa21.92■■□□□ 1.1
SBNO2-202ENST00000438103 MPHOSPH9Q99550 1183 aa21.91■■□□□ 1.1
SBNO2-202ENST00000438103 NGDNQ8NEJ9 315 aaKnown RBP21.9■■□□□ 1.1
SBNO2-202ENST00000438103 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
SBNO2-202ENST00000438103 RTF1Q92541 710 aaKnown RBP21.89■■□□□ 1.1
SBNO2-202ENST00000438103 CHMP4BQ9H444 224 aaKnown RBP21.89■■□□□ 1.09
SBNO2-202ENST00000438103 ANP32EQ9BTT0 268 aa21.88■■□□□ 1.09
SBNO2-202ENST00000438103 FOXD1Q16676 465 aa21.87■■□□□ 1.09
SBNO2-202ENST00000438103 NESP48681 1621 aa21.86■■□□□ 1.09
SBNO2-202ENST00000438103 ANP32BQ92688 251 aaKnown RBP21.85■■□□□ 1.09
SBNO2-202ENST00000438103 EIF5BO60841 1220 aaKnown RBP21.85■■□□□ 1.09
SBNO2-202ENST00000438103 TERF2IPQ9NYB0 399 aa21.84■■□□□ 1.09
SBNO2-202ENST00000438103 MAP3K1Q13233 1512 aa21.84■■□□□ 1.09
SBNO2-202ENST00000438103 POLA1P09884 1462 aaPredicted RBP21.83■■□□□ 1.09
SBNO2-202ENST00000438103 GOLGA2Q08379 1002 aa21.83■■□□□ 1.08
SBNO2-202ENST00000438103 MS4A1P11836 297 aa21.83■■□□□ 1.08
SBNO2-202ENST00000438103 TOPBP1Q92547 1522 aa21.82■■□□□ 1.08
SBNO2-202ENST00000438103 EIF3AQ14152 1382 aaKnown RBP21.8■■□□□ 1.08
SBNO2-202ENST00000438103 NUTM2DQ5VT03 806 aaPredicted RBP21.8■■□□□ 1.08
SBNO2-202ENST00000438103 DNMBPQ6XZF7 1577 aa21.8■■□□□ 1.08
SBNO2-202ENST00000438103 VGFO15240 615 aaPredicted RBP21.79■■□□□ 1.08
SBNO2-202ENST00000438103 CHMP4AQ9BY43 222 aa21.79■■□□□ 1.08
SBNO2-202ENST00000438103 OS9Q13438 667 aaPredicted RBP21.79■■□□□ 1.08
SBNO2-202ENST00000438103 PCF11O94913 1555 aaKnown RBP21.79■■□□□ 1.08
SBNO2-202ENST00000438103 ROCK2O75116 1388 aaKnown RBP21.78■■□□□ 1.08
SBNO2-202ENST00000438103 SENP3-EIF4A1A0A087X0R7 540 aa21.78■■□□□ 1.08
SBNO2-202ENST00000438103 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
SBNO2-202ENST00000438103 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.078e-7■■■■□ 22.4
SBNO2-202ENST00000438103 FRAT1Q92837 279 aaPredicted RBP21.75■■□□□ 1.07
SBNO2-202ENST00000438103 CASKIN1Q8WXD9 1431 aa21.74■■□□□ 1.07
SBNO2-202ENST00000438103 NUTM2FA1L443 756 aa21.74■■□□□ 1.07
SBNO2-202ENST00000438103 CASC1Q6TDU7 716 aa21.73■■□□□ 1.07
SBNO2-202ENST00000438103 FYCO1Q9BQS8 1478 aa21.73■■□□□ 1.07
SBNO2-202ENST00000438103 MAPKBP1O60336 1514 aa21.71■■□□□ 1.07
SBNO2-202ENST00000438103 U2AF1L5P0DN76 240 aaPredicted RBP21.7■■□□□ 1.06
SBNO2-202ENST00000438103 U2AF1Q01081 240 aaKnown RBP eCLIP21.7■■□□□ 1.06
SBNO2-202ENST00000438103 CALD1Q05682 793 aaKnown RBP21.7■■□□□ 1.06
SBNO2-202ENST00000438103 ZNF330Q9Y3S2 320 aaPredicted RBP21.7■■□□□ 1.06
SBNO2-202ENST00000438103 AMPHP49418 695 aa21.69■■□□□ 1.06
SBNO2-202ENST00000438103 EFCAB5A4FU69 1503 aa21.69■■□□□ 1.06
SBNO2-202ENST00000438103 TMX4Q9H1E5 349 aaPredicted RBP21.69■■□□□ 1.06
SBNO2-202ENST00000438103 IRX6P78412 446 aaPredicted RBP21.69■■□□□ 1.06
SBNO2-202ENST00000438103 TRAK1Q9UPV9 953 aa21.68■■□□□ 1.06
SBNO2-202ENST00000438103 SUPT16HQ9Y5B9 1047 aaKnown RBP21.68■■□□□ 1.06
SBNO2-202ENST00000438103 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
SBNO2-202ENST00000438103 ANO8Q9HCE9 1232 aaPredicted RBP21.68■■□□□ 1.06
SBNO2-202ENST00000438103 HSPA5P11021 654 aaKnown RBP21.67■■□□□ 1.06
SBNO2-202ENST00000438103 UACAQ9BZF9 1416 aa21.66■■□□□ 1.06
SBNO2-202ENST00000438103 FGD6Q6ZV73 1430 aa21.65■■□□□ 1.06
SBNO2-202ENST00000438103 CDK11BP21127 795 aaKnown RBP21.65■■□□□ 1.06
SBNO2-202ENST00000438103 KTN1Q86UP2 1357 aaKnown RBP21.64■■□□□ 1.06
SBNO2-202ENST00000438103 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.63■■□□□ 1.05
SBNO2-202ENST00000438103 CCDC144AA2RUR9 1427 aa21.63■■□□□ 1.05
SBNO2-202ENST00000438103 WDR97A6NE52 1622 aa21.63■■□□□ 1.05
SBNO2-202ENST00000438103 CUL7Q14999 1698 aa21.62■■□□□ 1.05
SBNO2-202ENST00000438103 CFAP43Q8NDM7 1665 aa21.62■■□□□ 1.05
SBNO2-202ENST00000438103 MRC2Q9UBG0 1479 aa21.61■■□□□ 1.05
SBNO2-202ENST00000438103 L3MBTL2Q969R5 705 aa21.61■■□□□ 1.05
SBNO2-202ENST00000438103 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
SBNO2-202ENST00000438103 EVA1CP58658 441 aa21.58■■□□□ 1.05
SBNO2-202ENST00000438103 LTV1Q96GA3 475 aaPredicted RBP21.58■■□□□ 1.05
SBNO2-202ENST00000438103 FGD1P98174 961 aa21.58■■□□□ 1.04
SBNO2-202ENST00000438103 DNAJC5BQ9UF47 199 aa21.57■■□□□ 1.04
SBNO2-202ENST00000438103 KCNJ4P48050 445 aa21.57■■□□□ 1.04
SBNO2-202ENST00000438103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.56■■□□□ 1.04
SBNO2-202ENST00000438103 BECN1Q14457 450 aa21.55■■□□□ 1.04
SBNO2-202ENST00000438103 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.55■■□□□ 1.04
SBNO2-202ENST00000438103 IFT140Q96RY7 1462 aa21.55■■□□□ 1.04
SBNO2-202ENST00000438103 IPO8O15397 1037 aaKnown RBP21.55■■□□□ 1.04
SBNO2-202ENST00000438103 NCLP19338 710 aaKnown RBP21.54■■□□□ 1.04
SBNO2-202ENST00000438103 STK31Q9BXU1 1019 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms